Contig 003780:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035O22Sequence657003780 (2)ref|XP_009611514.1|1e-91PREDICTED: long chain base biosynthesis protein 2a [Nicotiana tomentosiformis]701011370 (3)ref|XP_009761445.1|2e-100PREDICTED: long chain base biosynthesis protein 2a [Nicotiana sylvestris]
JMSF051K24Sequence309003780 (2)ref|XP_004516386.1|5e-26PREDICTED: long chain base biosynthesis protein 2a-like [Cicer arietinum]762011370 (3)ref|XP_009761445.1|9e-116PREDICTED: long chain base biosynthesis protein 2a [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF035O22+ ATTCNTCCAATTTCAGTGTGTAATGACAGAGTTCCTCCATCAACACGGGTACTACAA
                      ____________________________________________________________
consensus ATTCNTCCAATTTCAGTGTGTAATGACAGAGTTCCTCCATCAACACGGGTACTACAA
 
. : . : . : . : . : . :
JMSF035O22+ GTGCTTGGCGAAAACCTTTTCAAGGAGTCAATTACACGAGGAGTGCAATATTCATCAGAT
                      ____________________________________________________________
consensus GTGCTTGGCGAAAACCTTTTCAAGGAGTCAATTACACGAGGAGTGCAATATTCATCAGAT
 
. : . : . : . : . : . :
JMSF035O22+ GCAGCAAAACCAAGATAATTATATGATCCCAAGTTAAGGCACTTAGTGATTTTCGTGGTC
                      ____________________________________________________________
consensus GCAGCAAAACCAAGATAATTATATGATCCCAAGTTAAGGCACTTAGTGATTTTCGTGGTC
 
. : . : . : . : . : . :
JMSF035O22+ CGCTTCAGAGTTTTATTATTGTCATTGGACACTCGCTCCACAACATCAAACCAAGCATCA
                      ____________________________________________________________
consensus CGCTTCAGAGTTTTATTATTGTCATTGGACACTCGCTCCACAACATCAAACCAAGCATCA
 
. : . : . : . : . : . :
JMSF051K24+ AGTG
JMSF035O22+ GGAGGACTACAAATTGGTCGCCCAAAACAATCCTGAATCCGAAGATATAATCGACGAGTG
                      ____________________________________________________________
consensus GGAGGACTACAAATTGGTCGCCCAAAACAATCCTGAATCCGAAGATATAATCGACGAGTG
 
. : . : . : . : . : . :
JMSF051K24+ TAGAAATCCTCAANCCCTAAGCAGATCGGAGCATATCCCTGGAGATTGCTGGAATGGCAC
JMSF035O22+ TAGAAATCCTCAAGCCCTAAGCAGATCGGAGCATATCCCTGGAGATTGCTGGAATGGCAC
                      ____________________________________________________________
consensus TAGAAATCCTCAAGCCCTAAGCAGATCGGAGCATATCCCTGGAGATTGCTGGAATGGCAC
 
. : . : . : . : . : . :
JMSF051K24+ CAATCAAAGNTTTTCCTGAAGAAGTCGCGGAATTGGCCGAATGCAAAGAGGAGGATGTAG
JMSF035O22+ CAATCAAAGATTTTCCTGAAGAAGTCGCGGAATTGGCCGAATGCAAAGAGGAGGATGTAG
                      ____________________________________________________________
consensus CAATCAAAGATTTTCCTGAAGAAGTCGCGGAATTGGCCGAATGCAAAGAGGAGGATGTAG
 
. : . : . : . : . : . :
JMSF051K24+ CTGAAGAAGGTGGTCAAAGCGGTGAAATACGGGATTTCAATCATTTTGGAGGGGAGCAGA
JMSF035O22+ CTGAAGAACGTGGTCAAAGCGGTGAAATACGGGATTTCAATCATTTTGGAGGGGAGCAGA
                      ____________________________________________________________
consensus CTGAAGAAGGTGGTCAAAGCGGTGAAATACGGGATTTCAATCATTTTGGAGGGGAGCAGA
 
. : . : . : . : . : . :
JMSF051K24+ GACCGGATCAGACGGCACNGCNGAGAGGAGAATCCGGCGAAAACGGGAGGTCGGAGATGG
JMSF035O22+ GACCGGATCAGACGGCACGGCGGAGAGGAGAATCCGGCGAAAACGGGAGGTCGGAGATGG
                      ____________________________________________________________
consensus GACCGGATCAGACGGCACGGCGGAGAGGAGAATCCGGCGAAAACGGGAGGTCGGAGATGG
 
. : . : . : . : . : . :
JMSF051K24+ CAGNGATCGGCTNGCGGCAGGTGATGGGAGAAGGAGAAGAGAGAGAGAGGGATGGGATTC
JMSF035O22+ CAGAGATCGGCTGGCGGCAGGTGATGGGAGAAGGAGAAGAGAGAGAGAGGGATGGGATTC
                      ____________________________________________________________
consensus CAGAGATCGGCTGGCGGCAGGTGATGGGAGAAGGAGAAGAGAGAGAGAGGGATGGGATTC
 
. : . : . : . : . : . :
JMSF051K24+ ACC
JMSF035O22+ ACCCAAAATCCAAACCCCTCTTTCCACTTGATTTGTTGATAATGAAAATGAATAATAATC
                      ____________________________________________________________
consensus ACCCAAAATCCAAACCCCTCTTTCCACTTGATTTGTTGATAATGAAAATGAATAATAATC