Contig 003780:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035O22Sequence657003780 (2)ref|XP_009611514.1|1e-91PREDICTED: long chain base biosynthesis protein 2a [Nicotiana tomentosiformis]701011370 (3)ref|XP_009761445.1|2e-100PREDICTED: long chain base biosynthesis protein 2a [Nicotiana sylvestris]
JMSF051K24Sequence309003780 (2)ref|XP_004516386.1|5e-26PREDICTED: long chain base biosynthesis protein 2a-like [Cicer arietinum]762011370 (3)ref|XP_009761445.1|9e-116PREDICTED: long chain base biosynthesis protein 2a [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF035O22+              ATTCNTCCAATTTCAGTGTGTAATGACAGAGTTCCTCCATCAACACGGGTACTACAA
                      ____________________________________________________________
consensus                ATTCNTCCAATTTCAGTGTGTAATGACAGAGTTCCTCCATCAACACGGGTACTACAA
 
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JMSF035O22+           GTGCTTGGCGAAAACCTTTTCAAGGAGTCAATTACACGAGGAGTGCAATATTCATCAGAT
                      ____________________________________________________________
consensus             GTGCTTGGCGAAAACCTTTTCAAGGAGTCAATTACACGAGGAGTGCAATATTCATCAGAT
 
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JMSF035O22+           GCAGCAAAACCAAGATAATTATATGATCCCAAGTTAAGGCACTTAGTGATTTTCGTGGTC
                      ____________________________________________________________
consensus             GCAGCAAAACCAAGATAATTATATGATCCCAAGTTAAGGCACTTAGTGATTTTCGTGGTC
 
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JMSF035O22+           CGCTTCAGAGTTTTATTATTGTCATTGGACACTCGCTCCACAACATCAAACCAAGCATCA
                      ____________________________________________________________
consensus             CGCTTCAGAGTTTTATTATTGTCATTGGACACTCGCTCCACAACATCAAACCAAGCATCA
 
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JMSF051K24+                                                                   AGTG
JMSF035O22+           GGAGGACTACAAATTGGTCGCCCAAAACAATCCTGAATCCGAAGATATAATCGACGAGTG
                      ____________________________________________________________
consensus             GGAGGACTACAAATTGGTCGCCCAAAACAATCCTGAATCCGAAGATATAATCGACGAGTG
 
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JMSF051K24+           TAGAAATCCTCAANCCCTAAGCAGATCGGAGCATATCCCTGGAGATTGCTGGAATGGCAC
JMSF035O22+           TAGAAATCCTCAAGCCCTAAGCAGATCGGAGCATATCCCTGGAGATTGCTGGAATGGCAC
                      ____________________________________________________________
consensus             TAGAAATCCTCAAGCCCTAAGCAGATCGGAGCATATCCCTGGAGATTGCTGGAATGGCAC
 
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JMSF051K24+           CAATCAAAGNTTTTCCTGAAGAAGTCGCGGAATTGGCCGAATGCAAAGAGGAGGATGTAG
JMSF035O22+           CAATCAAAGATTTTCCTGAAGAAGTCGCGGAATTGGCCGAATGCAAAGAGGAGGATGTAG
                      ____________________________________________________________
consensus             CAATCAAAGATTTTCCTGAAGAAGTCGCGGAATTGGCCGAATGCAAAGAGGAGGATGTAG
 
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JMSF051K24+           CTGAAGAAGGTGGTCAAAGCGGTGAAATACGGGATTTCAATCATTTTGGAGGGGAGCAGA
JMSF035O22+           CTGAAGAACGTGGTCAAAGCGGTGAAATACGGGATTTCAATCATTTTGGAGGGGAGCAGA
                      ____________________________________________________________
consensus             CTGAAGAAGGTGGTCAAAGCGGTGAAATACGGGATTTCAATCATTTTGGAGGGGAGCAGA
 
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JMSF051K24+           GACCGGATCAGACGGCACNGCNGAGAGGAGAATCCGGCGAAAACGGGAGGTCGGAGATGG
JMSF035O22+           GACCGGATCAGACGGCACGGCGGAGAGGAGAATCCGGCGAAAACGGGAGGTCGGAGATGG
                      ____________________________________________________________
consensus             GACCGGATCAGACGGCACGGCGGAGAGGAGAATCCGGCGAAAACGGGAGGTCGGAGATGG
 
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JMSF051K24+           CAGNGATCGGCTNGCGGCAGGTGATGGGAGAAGGAGAAGAGAGAGAGAGGGATGGGATTC
JMSF035O22+           CAGAGATCGGCTGGCGGCAGGTGATGGGAGAAGGAGAAGAGAGAGAGAGGGATGGGATTC
                      ____________________________________________________________
consensus             CAGAGATCGGCTGGCGGCAGGTGATGGGAGAAGGAGAAGAGAGAGAGAGGGATGGGATTC
 
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JMSF051K24+           ACC                                                         
JMSF035O22+           ACCCAAAATCCAAACCCCTCTTTCCACTTGATTTGTTGATAATGAAAATGAATAATAATC
                      ____________________________________________________________
consensus             ACCCAAAATCCAAACCCCTCTTTCCACTTGATTTGTTGATAATGAAAATGAATAATAATC