Contig 003774:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF035G17-                                                                   GGG
                      ____________________________________________________________
consensus                                                                      GGG
 
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rJMSF035G17-          TAAGTGATGATGATCATGGAGGATTGCGGTCGATCCCCACAGATCGTGCCAATGTTAAAA
                      ____________________________________________________________
consensus             TAAGTGATGATGATCATGGAGGATTGCGGTCGATCCCCACAGATCGTGCCAATGTTAAAA
 
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rJMSF035G17-          ACGCGTTTCAATTGGATTAAAAGAAGCACAATTTAGAAGGTGATGCAAAATTCTAAGCTT
                      ____________________________________________________________
consensus             ACGCGTTTCAATTGGATTAAAAGAAGCACAATTTAGAAGGTGATGCAAAATTCTAAGCTT
 
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rJMSF035G17-          CAATGTAAGCAGCAAGTAGAGGTGTGCTTAGTTGCAGTGACTTCATCAATGTGAATAATT
JMFN014I02+                 AAGCAGCAAGTAGAGGTGTGCTTAGTGNCAGTGACTTCATCAATGTGAATAATT
                      ____________________________________________________________
consensus             CAATGTAAGCAGCAAGTAGAGGTGTGCTTAGTTGCAGTGACTTCATCAATGTGAATAATT
 
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rJMSF035G17-          TCCTTTCTTCCCTGCAGGCTTGAAGTGTGGCTAAGCCTTCCTCCATTAATGGCCTTAGCT
JMFN014I02+           TCCTTTCTTCCCTGCAGGCTTGAAGTGTGGCTAAGCCTTCCTCCATTAATGGCCTTAGCT
                      ____________________________________________________________
consensus             TCCTTTCTTCCCTGCAGGCTTGAAGTGTGGCTAAGCCTTCCTCCATTAATGGCCTTAGCT
 
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rJMSF035G17-          TCAAGGGCCTTCTGGCTCACAGCTCGATGAATCTTGGTGATCATCTGCAGAAACGCCTCT
JMFN014I02+           TCAAGGGCCTTCTGGCTCACAGCTCGATGAATCTTGGTGATCATCTGCAGAAACGCCTCT
                      ____________________________________________________________
consensus             TCAAGGGCCTTCTGGCTCACAGCTCGATGAATCTTGGTGATCATCTGCAGAAACGCCTCT
 
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rJMSF035G17-          TCCACGTTCAGATTCTCCTTCGCAGACGTTTCCAGGAAGGAGATGCCCTCCAGCTCCGCC
JMFN014I02+           TCCACGTTCAGATTCTCCTTCGCAGACGTTTCCAGGAAGGAGATGCCCTCCAGCTCCGCC
JMSF035G17+                                                                 TCCGCC
                      ____________________________________________________________
consensus             TCCACGTTCAGATTCTCCTTCGCAGACGTTTCCAGGAAGGAGATGCCCTCCAGCTCCGCC
 
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rJMSF035G17-          AGGCTTTGCCCGTCTTCTTGGTTGATCTCTCTCGAGTTTTCCAGATCGCATTTGTTGCCC
JMFN014I02+           AGGCTTTGCCCGTCTTCTTGGTTGATCTCTCTCGAGTTTTCCAGATCGCATTTGTTGCCC
JMSF035G17+           AGGCTTTGCCCGTCTTCTTGGTTGATCTCTCTCGAGTTTTCCAGATCGCATTTGTTGCCC
                      ____________________________________________________________
consensus             AGGCTTTGCCCGTCTTCTTGGTTGATCTCTCTCGAGTTTTCCAGATCGCATTTGTTGCCC
 
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rJMSF035G17-          ACCAGGACAATCACCATGTCTGAGCTCCCTTGCTCCCTCAGCTCCACCAGCCATCTCCTC
JMFN014I02+           ACCAGGACAATCACCATGTCTGAGCTCCCTTGCTCCCTCAGCTCCACCAGCCATTTCCTC
JMSF035G17+           ACCAGGACAATCACCATGTCTGAGCTCCCTTGCTCCCTCAGCTCCACCAGCCATCTCCTC
                      ____________________________________________________________
consensus             ACCAGGACAATCACCATGTCTGAGCTCCCTTGCTCCCTCAGCTCCACCAGCCATCTCCTC
 
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rJMSF035G17-          AGGCTCTCGAAGGTCGCTCTTCTTGTTATGTCGTACACCAGTAGCGCCCCCAGCGCTCCC
JMFN014I02+           AGGCTCTCGAAGGTCGCTCTTCTTGTTATGTCGTACACCAGTAGCGCCCCCAGCGCTCCC
JMSF035G17+           AGGCTCTCGAAGGTCGCTCTTCTTGTTATGTCGTACACCAGTAGCGCCCCCAGCGCTCCC
                      ____________________________________________________________
consensus             AGGCTCTCGAAGGTCGCTCTTCTTGTTATGTCGTACACCAGTAGCGCCCCCAGCGCTCCC
 
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rJMSF035G17-          CTGTAGTACGAGCTTGTGATGGCTCTAAACCTTTCTTGGCCAGCAGTGTCCCATATCTGA
JMFN014I02+           CTGTAGTACGAGCTTGTGATGGCTCTAAACCTTTCTTGGCCAGCAGTGTCCCATATCTGA
JMSF035G17+           CTGTAGTACGAGCTTGTGATGGCTCTAAACCTTTCTTGGCCAGCAGTGTCCCATATCTGA
                      ____________________________________________________________
consensus             CTGTAGTACGAGCTTGTGATGGCTCTAAACCTTTCTTGGCCAGCAGTGTCCCATATCTGA
 
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rJMSF035G17-          GCCTTGATGAGCTTCCCACCCACCCTAATATTCCTGTAAGCAAATTCAACACCTATGGTG
JMFN014I02+           GCCTTGATGAGCTTCCCACCCACCCTAATATTCCTGTAAGCAAATTCAACACCTATGGTG
JMSF035G17+           GCCTTGATGAGCTTCCCACCCACCCTAATATTCCTGTAAGCAAATTCAACACCTATGGTG
                      ____________________________________________________________
consensus             GCCTTGATGAGCTTCCCACCCACCCTAATATTCCTGTAAGCAAATTCAACACCTATGGTG
 
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rJMSF035G17-          GGCTTGGAATCCAGATGGAACTCATCTTTCGCA                           
JMFN014I02+           GGCTTGGAATCCAGATGGAACTCATCTTTCGCAAATCTTGACAGCAGATTAGACTTCCCC
JMSF035G17+           GGCTTGGAATCCAGATGGAACTCATCTTTCGCAAATCTTGACAGCAGATTAGACTTCCCC
                      ____________________________________________________________
consensus             GGCTTGGAATCCAGATGGAACTCATCTTTCGCAAATCTTGACAGCAGATTAGACTTCCCC
 
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JMFN014I02+           ACGCCTGAGTCTCCGACAAGAAC                                     
JMSF035G17+           ACGCCTGAGTCTCCGACAAGAACCGCCTTGAACAGGTAATCACACTCTTCATCAAACGAA
                      ____________________________________________________________
consensus             ACGCCTGAGTCTCCGACAAGAACCGCCTTGAACAGGTAATCACACTCTTCATCAAACGAA
 
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JMSF035G17+           TCTACGGCCATGATTCAACGCCACAAAACATTAACCCAAAACCTAAATATAGTATTCAAC
                      ____________________________________________________________
consensus             TCTACGGCCATGATTCAACGCCACAAAACATTAACCCAAAACCTAAATATAGTATTCAAC
 
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JMSF035G17+           TAAACCCCACCCTGCTGTCATGGGAGAGAGAGAGAAGAGAGAGAGAGAATTGAGGAAGAA
                      ____________________________________________________________
consensus             TAAACCCCACCCTGCTGTCATGGGAGAGAGAGAGAAGAGAGAGAGAGAATTGAGGAAGAA
 
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JMSF035G17+           GAAGAAGAAGAAGCAGAGGGTAAAACATGGGCTTTCTATCATAGTCACTTACCTAAAGTC
                      ____________________________________________________________
consensus             GAAGAAGAAGAAGCAGAGGGTAAAACATGGGCTTTCTATCATAGTCACTTACCTAAAGTC