Contig 003769:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034L15+                                             TCCCAAAAGCTCAAAAATCCACTTGA
                      ____________________________________________________________
consensus                                               TCCCAAAAGCTCAAAAATCCACTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS048F03+                                                        TCTCAAAGAACAGGT
JMSF034L15+           TGATAATGCACCATAGCCCTTTCTCACAGTGGTAGCTGTAAAGCCTCTCAAAGAACAGGT
                      ____________________________________________________________
consensus             TGATAATGCACCATAGCCCTTTCTCACAGTGGTAGCTGTAAAGCCTCTCAAAGAACAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS048F03+           CTAGATCAGCAATCGGTTCAACACTGAAGCTCTCACCATTAAGAAGACCAGACGGGCTTT
JMSF034L15+           CTAGATCAGCAATCGGTTCAACACTGAAGCTCTCACCATTAAGAAGACCAGACGGGCTTT
                      ____________________________________________________________
consensus             CTAGATCAGCAATCGGTTCAACACTGAAGCTCTCACCATTAAGAAGACCAGACGGGCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS048F03+           CACTACCAGCACTTGGCGCTCTGTGATAGTCGGACAACTCGATTTCAGGAGGCACATCAT
JMSF034L15+           CACTACCAGCACTTGGCGCTCTGTGATAGTCGGACAACTCGATTTCAGGAGGCACATCAT
                      ____________________________________________________________
consensus             CACTACCAGCACTTGGCGCTCTGTGATAGTCGGACAACTCGATTTCAGGAGGCACATCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS048F03+           CTAGTAAGCCTGTAGTTAAAGATGATTCACCACGCCATTTCCATCTAAATATGTTAAGGC
JMSF034L15+           CTAGTAAGCCTGTAGTTAAAGATGATTCACCACGCCATTTCCATCTAAATATGTTAAGGC
                      ____________________________________________________________
consensus             CTAGTAAGCCTGTAGTTAAAGATGATTCACCACGCCATTTCCATCTAAATATGTTAAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS048F03+           CATGAGCAGCTTTTGACCCGCTAAACATCATTTATATATGTTGATGTTAAGCAAGCACGG
JMSF034L15+           CATGAGCAGCTTTTGACCCGCTAAACATCATTTATATATGTTGATGTTAAGCAAGCACGG
                      ____________________________________________________________
consensus             CATGAGCAGCTTTTGACCCGCTAAACATCATTTATATATGTTGATGTTAAGCAAGCACGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS048F03+           CCTGTCCATTCCGTGTACAGGAGGTAATTAAGCCATGTTGCTGCAAAGAGGAGAATCACT
JMSF034L15+           CCTGTCCATTCCGTGTACAGGAGGTAATTAAGCCATGTTGCTGCAAAGAGGAGAATCACT
                      ____________________________________________________________
consensus             CCTGTCCATTCCGTGTACAGGAGGTAATTAAGCCATGTTGCTGCAAAGAGGAGAATCACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS048F03+           GTCCCCGTCAATGCCCAGCTCAAATTATCAACAATAAACTAGAAAAATACTAAAAATAGA
JMSF034L15+           GTCCCCGTCAATGCCCAGCTCAAATTATCAACAATAAACTAGAAAAATACTAAAAATAGA
                      ____________________________________________________________
consensus             GTCCCCGTCAATGCCCAGCTCAAATTATCAACAATAAACTAGAAAAATACTAAAAATAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS048F03+           AAAAAAGAGCTTAATT                                            
JMSF034L15+           AAAAAAGAGCTTAATTTGAATTTAAAAAACAAGCAGAAAGTAACAAGTTATATATTCAAT
                      ____________________________________________________________
consensus             AAAAAAGAGCTTAATTTGAATTTAAAAAACAAGCAGAAAGTAACAAGTTATATATTCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034L15+           TTTTCTTATCAACCCAAAGGGATTGTGATTCTGTTTTCTTGTGTTCTTGGAATTTGATGA
                      ____________________________________________________________
consensus             TTTTCTTATCAACCCAAAGGGATTGTGATTCTGTTTTCTTGTGTTCTTGGAATTTGATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034L15+           CAAGGGAAAGAGAATGATGGGGTAAGGAGGTTTCTTGGGTTATTGTTTAATTGAAAAGGA
                      ____________________________________________________________
consensus             CAAGGGAAAGAGAATGATGGGGTAAGGAGGTTTCTTGGGTTATTGTTTAATTGAAAAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034L15+           AAAGGAGACGTGATAGACGATGCCTACTTGGACTCAACTTGATCGCTTCTTCTTCCTCCC
                      ____________________________________________________________
consensus             AAAGGAGACGTGATAGACGATGCCTACTTGGACTCAACTTGATCGCTTCTTCTTCCTCCC