| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN007H03 | Sequence | 625 | 003767 (6) | emb|CDP14781.1| | 1e-74 | unnamed protein product [Coffea canephora] | |||||
| JMFN014D14 | Sequence | 658 | 003767 (6) | ref|XP_010689290.1| | 6e-77 | PREDICTED: riboflavin synthase [Beta vulgaris subsp. vulgaris] | |||||
| JMSF034I06 | Sequence | 671 | 003767 (6) | ref|XP_004243342.1| | 2e-55 | PREDICTED: riboflavin synthase [Solanum lycopersicum] | 732 | 003767 (6) | ref|XP_010689290.1| | 2e-118 | PREDICTED: riboflavin synthase [Beta vulgaris subsp. vulgaris] |
| JMSF052G13 | Sequence | 612 | 003767 (6) | ref|XP_010689290.1| | 2e-64 | PREDICTED: riboflavin synthase [Beta vulgaris subsp. vulgaris] | 885 | 003767 (6) | ref|XP_010689290.1| | 7e-120 | PREDICTED: riboflavin synthase [Beta vulgaris subsp. vulgaris] |
This contig is upended
. : . : . : . : . : . :
JMFN007H03+ TAACTCATTATGATCCTTTGACTAGGATCGTAAGGCAGGATTTTACTCATTGCAT
____________________________________________________________
consensus TAACTCATTATGATCCTTTGACTAGGATCGTAAGGCAGGATTTTACTCATTGCAT
. : . : . : . : . : . :
JMFN007H03+ ACTAAGTAGTGGATGCGGGTTTCCCCCCGTAACCAAAAAGATTACACCTTTATCAAGAAT
____________________________________________________________
consensus ACTAAGTAGTGGATGCGGGTTTCCCCCCGTAACCAAAAAGATTACACCTTTATCAAGAAT
. : . : . : . : . : . :
JMFN007H03+ ATGCTCAAACATGTTGACAATCAAAATCAAATAACATTTTATTCAACATTTAAGATCACT
rJMSF034I06- GTTGACAATCAAAATCAAATAACATTTTATTCAACATTTAAGATCACT
rJMSF052G13- AAATCAAATAACATTTTATTCAACATTTAAGATCACT
____________________________________________________________
consensus ATGCTCAAACATGTTGACAATCAAAATCAAATAACATTTTATTCAACATTTAAGATCACT
. : . : . : . : . : . :
JMFN007H03+ GGGAGAAGATAGAAAATGGAGCAACACTGAAAGGGGCTACCTGTTTCAGCTCAAGCAGAT
rJMSF034I06- GGGAGAAGATAGAAAATGGAGCAACACTGAAAGGGGCTACCTGTTTCAGCTCAAGCAGAT
rJMSF052G13- GGGAGAAGATAGAAAATGGAGCAACACTGAAAGGGGCTACCTGTTTCAGCTCAAGCAGAT
____________________________________________________________
consensus GGGAGAAGATAGAAAATGGAGCAACACTGAAAGGGGCTACCTGTTTCAGCTCAAGCAGAT
. : . : . : . : . : . :
JMFN007H03+ TTGATGGAATCTACAAACCCACTGCTAAGCAACCTTTCTACATACTTCCCCAGTATATCC
rJMSF034I06- TTGATGGAATCTACAAACCCACTGCTAAGCAACCTTTCTACATACTTCCCCAGTATATCC
rJMSF052G13- TTGATGGAATCTACAAACCCACTGCTAAGCAACCTTTCTACATACTTCCCCAGTATATCC
____________________________________________________________
consensus TTGATGGAATCTACAAACCCACTGCTAAGCAACCTTTCTACATACTTCCCCAGTATATCC
. : . : . : . : . : . :
JMFN007H03+ ACCTCCAAGTTCACCTTCTGCCCCATCTTCTTCAATGGAATCACCACTTTCTGTTGCGTG
rJMSF034I06- ACCTCCAAGTTCACCTTCTGCCCCATCTTCTTCAATGGAATCACCACTTTCTGTTGCGTG
rJMSF052G13- ACCTCCAAGTTCACCTTCTGCCCCATCTTCTTCAATGGAATCACCACTTTCTGTTGCGTG
____________________________________________________________
consensus ACCTCCAAGTTCACCTTCTGCCCCATCTTCTTCAATGGAATCACCACTTTCTGTTGCGTG
. : . : . : . : . : . :
JMFN007H03+ TAAGCCACCAGCATGAAGTTGAAGCACTCATCGTCAAACACGTCCACCACAGTCAAGCTT
rJMSF034I06- TAAGCCACCAGCATGAAGTTGAAGCACTCATCGTCAAACACGTCCACCACAGTCAAGCTT
rJMSF052G13- TAAGCCACCAGCATGAAGTTGAAGCACTCATCGTCAAACACGTCCACCACAGTCAAGCTT
____________________________________________________________
consensus TAAGCCACCAGCATGAAGTTGAAGCACTCATCGTCAAACACGTCCACCACAGTCAAGCTT
. : . : . : . : . : . :
JMFN007H03+ GTCCCGTCGACGGCGATGAAGCCTTTGGGCACAATGTACTTTAGCAGCTCCTTCGTCGTC
rJMSF034I06- GTCCCGTCGACGGCGATGAAGCCTTTGGGCACAATGTACTTTAGCAGCTCCTTCGTCGTC
rJMSF052G13- GTCCCGTCGACGGCGATGAAGCCTCTGGGCACAATGTACTTTAGCAGCTCCTTCGTCGTC
JMFN014D14+ CCGTCGACGNCGATGAAGCCTTTGGGCACAATGTACTTTAGCAGCTCCTTCGTCGTC
____________________________________________________________
consensus GTCCCGTCGACGGCGATGAAGCCTTTGGGCACAATGTACTTTAGCAGCTCCTTCGTCGTC
. : . : . : . : . : . :
JMFN007H03+ TTCACCTTCACCCACAATGAATCCCCTTCTGGGTCGAGCCCCACGATCACGCCGGTGCCG
rJMSF034I06- TTCACCTTCACCCACAATGAATCCCCTCCTGGGTCGAGCCCCACGATCACGCCGGTGCCG
rJMSF052G13- TTCACCTTCACCCACAATGAATCCCCTTCTGGGTCGAGCCCCACGATCACGCCGGTGCCG
JMFN014D14+ TTCACCTTCACCCACAATGAATCCCCTTCTGGGTCGAGCCCCACGATCACGCCGGTGCCG
JMSF052G13+ CACCTTCACCCACAATGAATCCCCTTCTGGGTCGAGCCCCACGATCACGCCGGTGCCG
JMSF034I06+ CGCCGGTGCCG
____________________________________________________________
consensus TTCACCTTCACCCACAATGAATCCCCTTCTGGGTCGAGCCCCACGATCACGCCGGTGCCG
. : . : . : . : . : . :
JMFN007H03+ TCCACGTGGCCCTGCACGAAGTGGCCGCCCATTCTTGAGCTGGGCGTCAGTGCCCTCTCC
rJMSF034I06- TCCACGTGGCCCTGCACGAAGTGGCCGCCCATTCTTGAACTGGGCGTCAGTGCCCTCTCC
rJMSF052G13- TCCACGTGGCCCTGCACGAAGTGGCCGCCCATTCTTGAACTGGGCGTCAGTGCCCTCTCC
JMFN014D14+ TCCACGTGGCCCTGCACGAAGTGGCCGCCCATTCTTGAACTGGGCGTCAGTGCCCTCTCC
JMSF052G13+ TCCACGTGGCCCTGCACGAAGTGGCCGCCCATTCTTGAACTGGGCGTCAGTGCCCTCTCC
JMSF034I06+ TCCACGTGGCCCTGCACGAAGTGNCCGCCCATTCTTGAACTGGGCGTCAGTGCCCTCTCC
____________________________________________________________
consensus TCCACGTGGCCCTGCACGAAGTGGCCGCCCATTCTTGAACTGGGCGTCAGTGCCCTCTCC
. : . : . : . : . : . :
JMFN007H03+ AAATTGACCGGAGATCCCTGCTCCAATTCA
rJMSF034I06- AAATTGACCGGAGATCCCTGCTCCAATTCACTCAGAGAGGTCTTTCGCAGGGTCTCCGGG
rJMSF052G13- AAATTGACCGGAGATCCCTGCTCCAATTCACTCAGAGAGGTCTTTCGCAGGGTCTCCGGG
JMFN014D14+ AAATTGACCGGAGATCCCTGCTCCAATTCACTCAGAGAGGTCTTTCGCAGGGTCTCCGGG
JMSF052G13+ AAATTGACCGGAGATCCCTGCTCCAATTCACTCAGAGAGGTCTTTCGCAGGGTCTCCGGG
JMSF034I06+ AAATTGACCGGAGATCCCTGCTCCAATTCACTCAGAGAGGTCTTTCGCAGGGTCTCCGGG
____________________________________________________________
consensus AAATTGACCGGAGATCCCTGCTCCAATTCACTCAGAGAGGTCTTTCGCAGGGTCTCCGGG
. : . : . : . : . : . :
rJMSF034I06- GCCAACCCGACCGTGAATTCCGACAATTGGGTGTCGAATTCCGTGACGGTTAAACAAGTT
rJMSF052G13- GCCAACCCGACCGTGAATTCCGACAATTGGGTGTCGAATTCCGTGACGGTTAAACAAGTT
JMFN014D14+ GCCAACCCGACCGTGAATTCCGACAATTGGGTGTCGAATTCCGTGACGGTTAAACAAGTT
JMSF052G13+ GCCAACCCGACCGTGAATTCCGACAATTGGGTGTCGAATTCCGTGACGGTTAAACAAGTT
JMSF034I06+ GCCAACCCGACCGTGAATTCCGACAATTGGGTGTCGAATTCCGTGACGGTTAAACAAGTT
____________________________________________________________
consensus GCCAACCCGACCGTGAATTCCGACAATTGGGTGTCGAATTCCGTGACGGTTAAACAAGTT
. : . : . : . : . : . :
rJMSF034I06- CCGTTGACGGCGATGCTGTCGCCGAGATGGACGCCGTCAAGAACGGTTTTTGCGCCGATT
rJMSF052G13- CCGTTGACGGCGATGCTGTCGCCGAGATGGACGCCGTCAAGAACGGTTTTTGCGCCGATT
JMFN014D14+ CCGTTGACGGCGATGCTGTCGCCGAGATGGACGCCGTCAAGAACGGTTTTTGCGCCGATT
JMSF052G13+ CCGTTGACGGCGATGCTGTCGCCGAGATGGACGCCGTCAAGAACGGTTTTTGCGCCGATT
JMSF034I06+ CCGTTGACGGCGATGCTGTCGCCGAGATGGACGCCGTCAAGAACGGTTTTTGCGCCGATT
____________________________________________________________
consensus CCGTTGACGGCGATGCTGTCGCCGAGATGGACGCCGTCAAGAACGGTTTTTGCGCCGATT
. : . : . : . : . : . :
rJMSF034I06- TTCAGGGTGAAACTTTCGGGATCTTCGTACCCGATGTGTCGGACTTCGCCCATCTCTTCG
rJMSF052G13- TTCAGGGTGAAACTTTCGGGATCTTCGTACCCGATGTGTCGGACTTCGCCCATCTCTTCG
JMFN014D14+ TTCAGGGTGAAACTTTCGGGATCTTCGTACCCGATGTGTCGGACTTCGCCCATCTCTTCG
JMSF052G13+ TTCAGGGTGAAACTTTCGGGATCTTCGTACCCGATGTGTCGGACTTCGCCCATCTCTTCG
JMSF034I06+ TTCAGGGTGAAACTTTCGGGATCTTCGTACCCGATGTGTCGGACTTCGCCCATCTCTTCG
____________________________________________________________
consensus TTCAGGGTGAAACTTTCGGGATCTTCGTACCCGATGTGTCGGACTTCGCCCATCTCTTCG
. : . : . : . : . : . :
rJMSF034I06- ACTATGCCGGTGAAGA
rJMSF052G13- ACTATGCCGGTGAAGAGGGATTTGATCGGGAGGGGTCCGGAGTAAAGTAGGTAGGGTTTC
JMFN014D14+ ACTATGCCGGTGAAGAGGGATTTGATCGGGAGGGGTCCGGAGTAAAGTAGGTAGGGTTTC
JMSF052G13+ ACTATGCCGGTGAAGAGGGATTTGATCGGGAGGGGTCCGGAGTAAAGTAGGTAGGGTTTC
JMSF034I06+ ACTATGCCGGTGAAGAGGGATTTGATCGGGAGGGGTCCGGAGTAAAGTAGGTAGGGTTTC
____________________________________________________________
consensus ACTATGCCGGTGAAGAGGGATTTGATCGGGAGGGGTCCGGAGTAAAGTAGGTAGGGTTTC
. : . : . : . : . : . :
rJMSF052G13- CGGGGCTGGGTGAATCGGAGGGAAAGGGGATGATGGGGTTTGAGAGAGTGAATAGAAATG
JMFN014D14+ CGGGGCTGGGTGAATCGGAGGGAAAGGGGATGATGGGGTTTGAGAGAGTGAATAGAAATG
JMSF052G13+ CGGGGCTGGGTGAATCGGAGGGAAAGGGGATGATGGGGTTTGAGAGAGTGAATAGAAATG
JMSF034I06+ CGGGGCTGGGTGAATCGGAGGGAAAGGGGATGATGGGGTTTGAGAGAGTGAATAGAAATG
____________________________________________________________
consensus CGGGGCTGGGTGAATCGGAGGGAAAGGGGATGATGGGGTTTGAGAGAGTGAATAGAAATG
. : . : . : . : . : . :
rJMSF052G13- GGTTTCTTGAGAGTGAGCGAGGGACGCCATTGTTGGGTTTGAAGGTTGAGTATTGGTGAA
JMFN014D14+ GGTTTCTTGAGAGTGAGCGAGGGACGCCATTGTTGGGTTTGAAGGTTGAGTATTGGTGAA
JMSF052G13+ GGTTTCTTGAGAGTGAGCGAGGGACGCCATTGTTGGGTTTGAAGGTTGAGTATTGGTGAA
JMSF034I06+ GGTTTCTTGAGAGTGAGCGAGGGACGCCATTGTTGGGTTTGAAGGTTGAGTATTGGTGAA
____________________________________________________________
consensus GGTTTCTTGAGAGTGAGCGAGGGACGCCATTGTTGGGTTTGAAGGTTGAGTATTGGTGAA
. : . : . : . : . : . :
rJMSF052G13- GCTCT
JMFN014D14+ GCTCTGAGGGGTTTTGAGGATGAAGAAGACAGTGAGGAGATGGAAAGGGCCGCCATTTTC
JMSF052G13+ GCTCTGAGGGGTTTTGAGGATGAAGAAGACAGTGAGGAGATGGAAAGGGCCGCCATTTTC
JMSF034I06+ GCTCTGAGGGGTTTTGAGGATGAAGAAGACAGTGAGGAGATGGAAAGGGCCGCCATTTTC
____________________________________________________________
consensus GCTCTGAGGGGTTTTGAGGATGAAGAAGACAGTGAGGAGATGGAAAGGGCCGCCATTTTC
. : . : . : . : . : . :
JMSF052G13+ TGTCAATTGCCT
JMSF034I06+ TGTCAATTGCCTTGCTCAGTTGCTCAGAGTCTGAGATTAAATCTGTTATAATCATAGATA
____________________________________________________________
consensus TGTCAATTGCCTTGCTCAGTTGCTCAGAGTCTGAGATTAAATCTGTTATAATCATAGATA
. : . : . : . : . : . :
JMSF034I06+ AAAACAAAGAAAATTATGTATTTGACACCATAAATCACACTTAATATGGTATGTTAGTCC
____________________________________________________________
consensus AAAACAAAGAAAATTATGTATTTGACACCATAAATCACACTTAATATGGTATGTTAGTCC