| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS080E06 | Sequence | 617 | 003764 (4) | ref|XP_009594051.1| | 1e-31 | PREDICTED: formin-binding protein 4 isoform X1 [Nicotiana tomentosiformis] | |||||
| JMSF022C20 | Sequence | 674 | 003764 (4) | ref|XP_009594051.1| | 7e-31 | PREDICTED: formin-binding protein 4 isoform X1 [Nicotiana tomentosiformis] | 737 | 012733 (3) | ref|XP_009594051.1| | 1e-55 | PREDICTED: formin-binding protein 4 isoform X1 [Nicotiana tomentosiformis] |
| JMSF034C17 | Sequence | 687 | 003764 (4) | ref|XP_009594051.1| | 2e-31 | PREDICTED: formin-binding protein 4 isoform X1 [Nicotiana tomentosiformis] | 735 | 012733 (3) | ref|XP_009594051.1| | 8e-55 | PREDICTED: formin-binding protein 4 isoform X1 [Nicotiana tomentosiformis] |
| JMSF043M20 | Sequence | 741 | 003764 (4) | ref|XP_009594051.1| | 9e-35 | PREDICTED: formin-binding protein 4 isoform X1 [Nicotiana tomentosiformis] | 709 | 012733 (3) | ref|XP_009594051.1| | 5e-55 | PREDICTED: formin-binding protein 4 isoform X1 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF043M20+ CTTCAACCTTGGCAGTATCAG
____________________________________________________________
consensus CTTCAACCTTGGCAGTATCAG
. : . : . : . : . : . :
JMSF022C20+ TTTTACCTGGTCAT
JMSF043M20+ AGCCAATCACACCCTTAGCATCATTCTTGTCTTCTGTAGAAGCTACTTTTCCCTGGTCAT
JMFS080E06+ TTTTCCCTGGTCAT
JMSF034C17+ TTTTCCCTGGTCAT
____________________________________________________________
consensus AGCCAATCACACCCTTAGCATCATTCTTGTCTTCTGTAGAAGCTACTTTTCCCTGGTCAT
. : . : . : . : . : . :
JMSF022C20+ CATGGGCAACTGAGGAGTCCTCTGAGCCAGCACGTATAGGTCCTTCACTTGAACCCTCAT
JMSF043M20+ CATGGGCAACTGAGGAGTCCTCTGAGCCAGCACGTATAGGTCCTTCACTTGAACCCTCAT
JMFS080E06+ CATGGGCAACTGAGGAGTCCTCTGAGCCAGCACGTATAGGTCCTTCACTTGAACCCTCAT
JMSF034C17+ CATGGGCAACTGAGGAGTCCTCTGAGCCAGCACGTATAGGTCCTTCACTTGAACCCTCAT
____________________________________________________________
consensus CATGGGCAACTGAGGAGTCCTCTGAGCCAGCACGTATAGGTCCTTCACTTGAACCCTCAT
. : . : . : . : . : . :
JMSF022C20+ CCAACTCATCATCACTATACTGCCCAAGCAACATTAGAGGATTCTCTTGTTGAAGACCGA
JMSF043M20+ CCAACTCATCATCACTATACTGCCCAAGCAACATTAGAGGATTCTCTTGTTGAAGACCGA
JMFS080E06+ CCAACTCATCATCACTATACTGCCCAAGCAACATTAGAGGATTCTCTTGTTGAAGACCGA
JMSF034C17+ CCAACTCATCATCACTATACTGCCCAAGCAACATTAGAGGATTCTCTTGTTGAAGACCGA
____________________________________________________________
consensus CCAACTCATCATCACTATACTGCCCAAGCAACATTAGAGGATTCTCTTGTTGAAGACCGA
. : . : . : . : . : . :
JMSF022C20+ GAGGAGAAAATACTCTTCATTTTATCTCCACAAGCCTTTGATGCCGCCATAGAAGGACAT
JMSF043M20+ GAGGAGAAAATACTCTTCATTTTATCTCCACAAGCCTTTGATGCCGCCATAGAAGGACAT
JMFS080E06+ GAGGAGAAAATACTCTTCATTTTATCTCCACAAGCCTTTGATGCCGCCATAGAAGGACAT
JMSF034C17+ GAGGAGAAAATACTCTTCATTTTATCTCCACAAGCCTTTGATGCCGCCATAGAAGGACAT
____________________________________________________________
consensus GAGGAGAAAATACTCTTCATTTTATCTCCACAAGCCTTTGATGCCGCCATAGAAGGACAT
. : . : . : . : . : . :
JMSF022C20+ GAAAGGTAAGAAGTTATTCAATATTCACTGTGGCAGGGCCTTGATGTATACTGATGGCCA
JMSF043M20+ GAAAGGTAAGAAGTTATTCAATATTCACTGTGGCAGGGCCTTGATGTATACTGATGGCCA
JMFS080E06+ GAAAGGTAAGAAGTTATTCAATATTCACTGTGGCAGGGCCTTGATGTATACTGATGGCCA
JMSF034C17+ GAAAGGTAAGAAGTTATTCAATATTCACTGTGGCAGGGCCTTGATGTATACTGATGGCCA
____________________________________________________________
consensus GAAAGGTAAGAAGTTATTCAATATTCACTGTGGCAGGGCCTTGATGTATACTGATGGCCA
. : . : . : . : . : . :
JMSF022C20+ ATTGAAAGTTCCCAATACCACAGCCTGGTTACAGACTGAAAACATAATCTTTTGTGGAAC
JMSF043M20+ ATTGAAAGTTCCCAATACCACAGCCTGGTTACAGACTGAAAACATAATCTTTTGTGGAAC
JMFS080E06+ ATTGAAAGTTCCCAATACCACAGCCTGGTTACAGACTGAAAACATAATCTTTTGTGGAAC
JMSF034C17+ ATTGAAAGTTCCCAATACCACAGCCTGGTTACAGACTGAAAACATAATCTTTTGTGGAAC
____________________________________________________________
consensus ATTGAAAGTTCCCAATACCACAGCCTGGTTACAGACTGAAAACATAATCTTTTGTGGAAC
. : . : . : . : . : . :
JMSF022C20+ AAACAACATGTCTTGTACAAAGAAAATCAATAATTTCCACCAATATTATGCGGTCACATC
JMSF043M20+ AAACAACATGTCTTGTACAAAGAAAATCAATAATTTCCACCAATATTATGCGGTCACATC
JMFS080E06+ AAACAACATGTCTTGTACAAAGAAAATCAATAATTTCCACCAATATTATGCGGTCACATC
JMSF034C17+ AAACAACATGTCTTGTACAAAGAAAATCAATAATTTCCACCAATATTATGCGGTCACATC
____________________________________________________________
consensus AAACAACATGTCTTGTACAAAGAAAATCAATAATTTCCACCAATATTATGCGGTCACATC
. : . : . : . : . : . :
JMSF022C20+ ATGTCTTCTCTACAAAGATGTCCTTTTGAAGAAAACTCACAGAACCCACCTGAAGATGAT
JMSF043M20+ ATGTCTTCTCTACAAAGATGTCCTTTTGAAGAAAACTCACAGAACCCACCTGAAGATGAT
JMFS080E06+ ATGTCTTCTCTACAAAGATGTCCTTTTGAAGAAAACTCACAGAACCCACCTGAAGATGAT
JMSF034C17+ ATGTCTTCTCTACAAAGATGTCCTTTTGAAGAAAACTCACAGAACCCACCTGAAGATGAT
____________________________________________________________
consensus ATGTCTTCTCTACAAAGATGTCCTTTTGAAGAAAACTCACAGAACCCACCTGAAGATGAT
. : . : . : . : . : . :
JMSF022C20+ GGTGAATTGGGTAGCTCAGCTTGATTTTTGGAAGCTTCATCCCCTCCAACTCCATCTTGA
JMSF043M20+ GGTGAATTGGGTAGCTCAGCTTGATTTTTGGAAGCTTCATCCCCTCCAACTCCATCTTGA
JMFS080E06+ GGTGAATTGGGTAGCTCAGCTTGATTTTTGGAAGCTTCATCCCCTCCAACTCCATCTTGA
JMSF034C17+ GGTGAATTGGGTAGCTCAGCTTGATTTTTGGAAGCTTCATCCCCTCCAACTCCATCTTGA
____________________________________________________________
consensus GGTGAATTGGGTAGCTCAGCTTGATTTTTGGAAGCTTCATCCCCTCCAACTCCATCTTGA
. : . : . : . : . : . :
JMSF022C20+ GAAGAGCCACCCAAATCTCCAGAGGGTTCCGCGAAGAGGTCAAGCTTTACTCTGCGACTG
JMSF043M20+ GAAGAGCCACCCAAATCTCCAGAGGGTTCCGCGAAGAGGTCAAGCTTTACTCTGCGACTG
JMFS080E06+ GAAGAGCCACCCAAATCTCCAGAGGGTTCCGCGAAGAGGTCAAGCTTTACTCTGCGACTG
JMSF034C17+ GAAGAGCCACCCAAATCTCCAGAGGGTTCCGCGAAGAGGTCAAGCTTTACTCTGCGACTG
____________________________________________________________
consensus GAAGAGCCACCCAAATCTCCAGAGGGTTCCGCGAAGAGGTCAAGCTTTACTCTGCGACTG
. : . : . : . : . : . :
JMSF022C20+ GAGGCGCTCATGGCGGCGAGCCGGCGCTCTTTTCTCTTTCCCATATTCTAAAACGACGAT
JMSF043M20+ GAGGCGCTCATGGCGGCGAGCCGGCGCTCTTTTCTCTTTCCCATATTCTAAAACGACGAT
JMFS080E06+ GAGGCGCTCATGGCGGCGAGCCGGCGCTCTTTTCTCTTTCCCATATTCTAAAACGA
JMSF034C17+ GAGGCGCTCATGGCGGCGAGCCGGCGCTCTTTTCTCTTTCCCATATTCTAAAACGACGAT
____________________________________________________________
consensus GAGGCGCTCATGGCGGCGAGCCGGCGCTCTTTTCTCTTTCCCATATTCTAAAACGACGAT
. : . : . : . : . : . :
JMSF022C20+ TTGACGGAGTTTTGATCGGT
JMSF043M20+ TTGACGGAGTTTTGATCGGTGATTAAATCAGCTAAAATTCTTCAGCTATATATGTTTCTC
JMSF034C17+ TTGACGGAGTTTTGATCGGTGATTAAATCAGCTAAAATTCTTCAGCTATATATGTTTCTC
____________________________________________________________
consensus TTGACGGAGTTTTGATCGGTGATTAAATCAGCTAAAATTCTTCAGCTATATATGTTTCTC