Contig 003763:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS052E09Sequence467003763 (6)ref|XP_006360347.1|2e-51PREDICTED: pleiotropic drug resistance protein 1-like [Solanum tuberosum]
JMFS115D12Sequence620003763 (6)ref|XP_009757475.1|9e-73PREDICTED: pleiotropic drug resistance protein 1-like, partial [Nicotiana sylve
JMSF002P01Sequence341003763 (6)ref|XP_006360347.1|8e-27PREDICTED: pleiotropic drug resistance protein 1-like [Solanum tuberosum]687002754 (3)ref|XP_004247841.1|9e-76PREDICTED: pleiotropic drug resistance protein 1 [Solanum lycopersicum]
JMSF020A12Sequence653003763 (6)ref|XP_009757475.1|2e-72PREDICTED: pleiotropic drug resistance protein 1-like, partial [Nicotiana sylve750002754 (3)ref|XP_004247841.1|8e-90PREDICTED: pleiotropic drug resistance protein 1 [Solanum lycopersicum]
JMSF031J22Sequence654003763 (6)ref|XP_009757475.1|2e-73PREDICTED: pleiotropic drug resistance protein 1-like, partial [Nicotiana sylve
JMSF033P06Sequence564003763 (6)ref|XP_009616095.1|5e-57PREDICTED: pleiotropic drug resistance protein 1-like [Nicotiana tomentosiformi

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS052E09+ ATATTAG
JMFS115D12+ TGCTTTTGGTTATGTGAAGGGAGGTGAGCAAATCCTCAAAGATATTAG
JMSF031J22+ CTTGCCTTGCTTTTGGTTATGTGAAGGGAGGTGAGCAAATCCTCAAAGATATTAG
JMSF020A12+ TGCTTTTGGTTATGTGAAGGGAGGTGAGCAAATCCTCAAAGATATTAG
                      ____________________________________________________________
consensus CTTGCCTTGCTTTTGGTTATGTGAAGGGAGGTGAGCAAATCCTCAAAGATATTAG
 
. : . : . : . : . : . :
JMFS052E09+ TAAAAGCGTTTATAAACGTGGGCAAAGATCTGCTGCCTACGTAGGCTGTTGCCTCTATAT
JMFS115D12+ TAAAAGCGTTGATAAACGTGGGCAAAGATCTGCTGCCTACGTAGGCTGTTGCCTCTATAT
JMSF031J22+ TAAAAGCGTTGATAAACGTGGGCAAAGATCTGCTGCCTACGTAGGCTGTTGCCTCTATAT
JMSF020A12+ TAAAAGCGTTGATAAACGTGGGCAAAGATCTGCTGCCTACGTAGGCTGTTGCCTCTATAT
JMSF033P06+ CCTACGTAGGCTGTTGCCTCTATAT
                      ____________________________________________________________
consensus TAAAAGCGTTGATAAACGTGGGCAAAGATCTGCTGCCTACGTAGGCTGTTGCCTCTATAT
 
. : . : . : . : . : . :
JMFS052E09+ TTAAATGCTCGTATCTCACTTCAATGGATGGCATATCAATCCCAACTCTATCAATTCTGT
JMFS115D12+ TTAAATGCTCGTATCTCACTTCAATGGATGGCATATCAATCCCAACTCTATCAATTCTGT
JMSF031J22+ TTAAATGCTCGTATCTCACTTCAATGGATGGCATATCAATCCCAACTCTATCAATTCTGT
JMSF020A12+ TTAAATGCTCGTATCTCACTTCAATGGATGGCATATCAATCCCAACTCTATCAATTCTGT
JMSF033P06+ TTAAATGCTCGTATCTCACTTCAATGGATGGCATATCAATCCCAACTCTATCAATTCTGT
                      ____________________________________________________________
consensus TTAAATGCTCGTATCTCACTTCAATGGATGGCATATCAATCCCAACTCTATCAATTCTGT
 
. : . : . : . : . : . :
JMFS052E09+ TCTTGAGTTTAACCAAGAATTTCTCATTATTTTCATCGGCAACTTTAACGAGCCTATCAA
JMFS115D12+ TCTTGAGTTTAACCAAGAATTTCTCATTATCTTCATCGGCAACCTTAACGAGCCTATCAA
JMSF031J22+ TCTTGAGTTTAACCAAGAATTTCTCATTATCTTCATCGGCAACCTTAACAAGCCTATCAA
JMSF020A12+ TCTTGAGTTTAACCAAGAATTTCTCATTATCTTCATCGGCAACCTTAACGAGCCTATCAA
JMSF033P06+ TCTTGAGTTTAACCAAGAATTTCTCATTATCTTCATCGGCAACCTTAACGAGCCTATCAA
                      ____________________________________________________________
consensus TCTTGAGTTTAACCAAGAATTTCTCATTATCTTCATCGGCAACCTTAACGAGCCTATCAA
 
. : . : . : . : . : . :
JMFS052E09+ GCAAGGCCATTCTCTCTTGGTATCCGAGGTTGTTAATGTCGATCTCGGCGCTGGGTCCGT
JMFS115D12+ GCAAGGCCATTCTCTCCTGGTATCCGAGGTTGTTAATGTCGATCTCGGCGGCGGGTCCGT
JMSF002P01+ TTGTTAATGTCGATCTCGGCGGCGGGTCCGT
JMSF031J22+ GCAAGGCCATTCTCTCCTGGTATCCGAGGTTGTTAATGTCGATCTCGGCGGCGGGTCCGT
JMSF020A12+ GCAAGGCCATTCTCTCCTGGTATCCGAGGTTGTTAATGTCGATCTCGGCGGCGGGTCCGT
JMSF033P06+ GCAAGGCCATTCTCTCCTGGTATCCGAGGTTGTTAATGTCGATCTCGGCGGCGGGTCCGT
                      ____________________________________________________________
consensus GCAAGGCCATTCTCTCCTGGTATCCGAGGTTGTTAATGTCGATCTCGGCGGCGGGTCCGT
 
. : . : . : . : . : . :
JMFS052E09+ CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGTGCTTCTCGAGCGCCG
JMFS115D12+ CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGAGCTTCTCGAGCGCCG
JMSF002P01+ CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGAGCTTCTCGAGCGCCG
JMSF031J22+ CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGAGCTTCTCGAGCGCCG
JMSF020A12+ CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGAGCTTCTCGAGCGCCG
JMSF033P06+ CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGAGCTTCTCGAGCGCCG
                      ____________________________________________________________
consensus CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGAGCTTCTCGAGCGCCG
 
. : . : . : . : . : . :
JMFS052E09+ CCCATTTGAGGGCCTCTTTGTCGTCCTCATCGCGAGAGGATCTGGATGAAGACTTCGGCC
JMFS115D12+ CCCATTTGAGGGCCTCTTCGTCGTCCTCATCGCGAGAGGATCTGGA-GAAGACTTCGGCC
JMSF002P01+ CCCATTTGAGGGCCTCTTCGTCGTCCTCATCGCGAGAGGATCTGGA-GAAGACTTCGGCC
JMSF031J22+ CCCATTTGAGGGCCTCTTCGTCGTCCTCATCGCGAGAGGATCTGGA-GAAGACTTCGGCC
JMSF020A12+ CCCATTTGAGGGCCTCTTNGTCGTCCTCATCGCGAGAGGATCTGGA-GAAGACTTCGGCC
JMSF033P06+ CCCATTTGAGGGCCTCTTNGTCGTCCTCATCGCGAGAGGATCTGGA-GAAGACTTCGGCC
                      ____________________________________________________________
consensus CCCATTTGAGGGCCTCTTCGTCGTCCTCATCGCGAGAGGATCTGGA-GAAGACTTCGGCC
 
. : . : . : . : . : . :
JMFS052E09+ CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTCTTAAGCTCCCTCGCAGGCTCCCGTCC
JMFS115D12+ CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTCTTAAGCTCCCTCGCAGGCTCCCGCCC
JMSF002P01+ CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTCTTAAGCTCCCTCGCAGGCTCCCGCCC
JMSF031J22+ CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTCTTAAGCTCCCTCGCAGGCTCCCGCCC
JMSF020A12+ CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTCTTAAGCTCCCTCGCAGGCTCCCGCCC
JMSF033P06+ CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTNTTAAGCTCCCTCGCAGGCTCCCGCCC
                      ____________________________________________________________
consensus CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTCTTAAGCTCCCTCGCAGGCTCCCGCCC
 
. : . : . : . : . : . :
JMFS052E09+ AGACTGGCTCGTAAGCTCCCGCCTCGCAGTATTCCCAGAT
JMFS115D12+ AGACTGGCTCGTAAGCTCCCGCCTCGCAGTATTCCCAGATCCGCTGGCTCCATGCCCACA
JMSF002P01+ AGACTGGCTCGTAAGCTCCCGCCTCGCAGTATTCCCAGATCCGCTGGCTCCATGCCCACA
JMSF031J22+ AGACTGGCTCGTAAGCTCCCGCCTCGCAGTATTCCCAGATCCGCTGGCTCCATGCCCACA
JMSF020A12+ AGACTGCATCGTAAGCTCCCGCCTCGCAGTATTCCCAGATCCGCTGGCTCCATGCCCACA
JMSF033P06+ AGACTGGCTCGTAAGCTCCCGCCTCGCAGTATTCCCAGATCCGCTGGCTCCATGCCCACA
                      ____________________________________________________________
consensus AGACTGGCTCGTAAGCTCCCGCCTCGCAGTATTCCCAGATCCGCTGGCTCCATGCCCACA
 
. : . : . : . : . : . :
JMFS115D12+ CTTTCTTGATCAACAAAATCTTAGCTTTTTAGTTTTCTTGATCGGGTTTTGCCTTTTTCT
JMSF002P01+ CTTTCTTGATCAACAAAATCTTAGCTTTTTAGTTTTCTTGATCGGGTTTTGCCTTTTTCT
JMSF031J22+ CTTTCTTGATCAACAAAATCTTAGCTTTTTAGTTTTCTTGATCGGGTTTTGCCTTTTTCT
JMSF020A12+ CTTTCTTGATCAACAAAATCTTAGCTTTTTAGTTTTCTTGATCGGGTTTTGCCTTTTTCT
JMSF033P06+ CTTTCTTGATCAACAAAATCTTAGCTTTTTAGTTTTCTTGATCGGGTTTTGCCTTTTTCT
                      ____________________________________________________________
consensus CTTTCTTGATCAACAAAATCTTAGCTTTTTAGTTTTCTTGATCGGGTTTTGCCTTTTTCT
 
. : . : . : . : . : . :
JMFS115D12+ CTATCCCAGTGGATTGAAAGAACAAAAGAATGA
JMSF002P01+ CTCTCCCAG
JMSF031J22+ CTCTCCCAGTGGATTGAAAGAACAAAAGAATGAGAATTGAGAAGCAGAGTGTTTTGACTC
JMSF020A12+ CTCTCCCAGTGGATTGAAAGAACAAAAGAATGAGAATTGAGAAGCAGAGTGTTTTGACTC
JMSF033P06+ CTCTCCCAGTGGATTGAAAGAACAAAAGAATGAGAATTGAGAAGCAGAGTGTTTTGACTC
                      ____________________________________________________________
consensus CTCTCCCAGTGGATTGAAAGAACAAAAGAATGAGAATTGAGAAGCAGAGTGTTTTGACTC