| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS052E09 | Sequence | 467 | 003763 (6) | ref|XP_006360347.1| | 2e-51 | PREDICTED: pleiotropic drug resistance protein 1-like [Solanum tuberosum] | |||||
| JMFS115D12 | Sequence | 620 | 003763 (6) | ref|XP_009757475.1| | 9e-73 | PREDICTED: pleiotropic drug resistance protein 1-like, partial [Nicotiana sylve | |||||
| JMSF002P01 | Sequence | 341 | 003763 (6) | ref|XP_006360347.1| | 8e-27 | PREDICTED: pleiotropic drug resistance protein 1-like [Solanum tuberosum] | 687 | 002754 (3) | ref|XP_004247841.1| | 9e-76 | PREDICTED: pleiotropic drug resistance protein 1 [Solanum lycopersicum] |
| JMSF020A12 | Sequence | 653 | 003763 (6) | ref|XP_009757475.1| | 2e-72 | PREDICTED: pleiotropic drug resistance protein 1-like, partial [Nicotiana sylve | 750 | 002754 (3) | ref|XP_004247841.1| | 8e-90 | PREDICTED: pleiotropic drug resistance protein 1 [Solanum lycopersicum] |
| JMSF031J22 | Sequence | 654 | 003763 (6) | ref|XP_009757475.1| | 2e-73 | PREDICTED: pleiotropic drug resistance protein 1-like, partial [Nicotiana sylve | |||||
| JMSF033P06 | Sequence | 564 | 003763 (6) | ref|XP_009616095.1| | 5e-57 | PREDICTED: pleiotropic drug resistance protein 1-like [Nicotiana tomentosiformi | |||||
This contig is upended
. : . : . : . : . : . :
JMFS052E09+ ATATTAG
JMFS115D12+ TGCTTTTGGTTATGTGAAGGGAGGTGAGCAAATCCTCAAAGATATTAG
JMSF031J22+ CTTGCCTTGCTTTTGGTTATGTGAAGGGAGGTGAGCAAATCCTCAAAGATATTAG
JMSF020A12+ TGCTTTTGGTTATGTGAAGGGAGGTGAGCAAATCCTCAAAGATATTAG
____________________________________________________________
consensus CTTGCCTTGCTTTTGGTTATGTGAAGGGAGGTGAGCAAATCCTCAAAGATATTAG
. : . : . : . : . : . :
JMFS052E09+ TAAAAGCGTTTATAAACGTGGGCAAAGATCTGCTGCCTACGTAGGCTGTTGCCTCTATAT
JMFS115D12+ TAAAAGCGTTGATAAACGTGGGCAAAGATCTGCTGCCTACGTAGGCTGTTGCCTCTATAT
JMSF031J22+ TAAAAGCGTTGATAAACGTGGGCAAAGATCTGCTGCCTACGTAGGCTGTTGCCTCTATAT
JMSF020A12+ TAAAAGCGTTGATAAACGTGGGCAAAGATCTGCTGCCTACGTAGGCTGTTGCCTCTATAT
JMSF033P06+ CCTACGTAGGCTGTTGCCTCTATAT
____________________________________________________________
consensus TAAAAGCGTTGATAAACGTGGGCAAAGATCTGCTGCCTACGTAGGCTGTTGCCTCTATAT
. : . : . : . : . : . :
JMFS052E09+ TTAAATGCTCGTATCTCACTTCAATGGATGGCATATCAATCCCAACTCTATCAATTCTGT
JMFS115D12+ TTAAATGCTCGTATCTCACTTCAATGGATGGCATATCAATCCCAACTCTATCAATTCTGT
JMSF031J22+ TTAAATGCTCGTATCTCACTTCAATGGATGGCATATCAATCCCAACTCTATCAATTCTGT
JMSF020A12+ TTAAATGCTCGTATCTCACTTCAATGGATGGCATATCAATCCCAACTCTATCAATTCTGT
JMSF033P06+ TTAAATGCTCGTATCTCACTTCAATGGATGGCATATCAATCCCAACTCTATCAATTCTGT
____________________________________________________________
consensus TTAAATGCTCGTATCTCACTTCAATGGATGGCATATCAATCCCAACTCTATCAATTCTGT
. : . : . : . : . : . :
JMFS052E09+ TCTTGAGTTTAACCAAGAATTTCTCATTATTTTCATCGGCAACTTTAACGAGCCTATCAA
JMFS115D12+ TCTTGAGTTTAACCAAGAATTTCTCATTATCTTCATCGGCAACCTTAACGAGCCTATCAA
JMSF031J22+ TCTTGAGTTTAACCAAGAATTTCTCATTATCTTCATCGGCAACCTTAACAAGCCTATCAA
JMSF020A12+ TCTTGAGTTTAACCAAGAATTTCTCATTATCTTCATCGGCAACCTTAACGAGCCTATCAA
JMSF033P06+ TCTTGAGTTTAACCAAGAATTTCTCATTATCTTCATCGGCAACCTTAACGAGCCTATCAA
____________________________________________________________
consensus TCTTGAGTTTAACCAAGAATTTCTCATTATCTTCATCGGCAACCTTAACGAGCCTATCAA
. : . : . : . : . : . :
JMFS052E09+ GCAAGGCCATTCTCTCTTGGTATCCGAGGTTGTTAATGTCGATCTCGGCGCTGGGTCCGT
JMFS115D12+ GCAAGGCCATTCTCTCCTGGTATCCGAGGTTGTTAATGTCGATCTCGGCGGCGGGTCCGT
JMSF002P01+ TTGTTAATGTCGATCTCGGCGGCGGGTCCGT
JMSF031J22+ GCAAGGCCATTCTCTCCTGGTATCCGAGGTTGTTAATGTCGATCTCGGCGGCGGGTCCGT
JMSF020A12+ GCAAGGCCATTCTCTCCTGGTATCCGAGGTTGTTAATGTCGATCTCGGCGGCGGGTCCGT
JMSF033P06+ GCAAGGCCATTCTCTCCTGGTATCCGAGGTTGTTAATGTCGATCTCGGCGGCGGGTCCGT
____________________________________________________________
consensus GCAAGGCCATTCTCTCCTGGTATCCGAGGTTGTTAATGTCGATCTCGGCGGCGGGTCCGT
. : . : . : . : . : . :
JMFS052E09+ CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGTGCTTCTCGAGCGCCG
JMFS115D12+ CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGAGCTTCTCGAGCGCCG
JMSF002P01+ CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGAGCTTCTCGAGCGCCG
JMSF031J22+ CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGAGCTTCTCGAGCGCCG
JMSF020A12+ CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGAGCTTCTCGAGCGCCG
JMSF033P06+ CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGAGCTTCTCGAGCGCCG
____________________________________________________________
consensus CAGGGCCGAAGATAAGGCCTTTCCGGAGACGGTCAAAGGTGGGGAGCTTCTCGAGCGCCG
. : . : . : . : . : . :
JMFS052E09+ CCCATTTGAGGGCCTCTTTGTCGTCCTCATCGCGAGAGGATCTGGATGAAGACTTCGGCC
JMFS115D12+ CCCATTTGAGGGCCTCTTCGTCGTCCTCATCGCGAGAGGATCTGGA-GAAGACTTCGGCC
JMSF002P01+ CCCATTTGAGGGCCTCTTCGTCGTCCTCATCGCGAGAGGATCTGGA-GAAGACTTCGGCC
JMSF031J22+ CCCATTTGAGGGCCTCTTCGTCGTCCTCATCGCGAGAGGATCTGGA-GAAGACTTCGGCC
JMSF020A12+ CCCATTTGAGGGCCTCTTNGTCGTCCTCATCGCGAGAGGATCTGGA-GAAGACTTCGGCC
JMSF033P06+ CCCATTTGAGGGCCTCTTNGTCGTCCTCATCGCGAGAGGATCTGGA-GAAGACTTCGGCC
____________________________________________________________
consensus CCCATTTGAGGGCCTCTTCGTCGTCCTCATCGCGAGAGGATCTGGA-GAAGACTTCGGCC
. : . : . : . : . : . :
JMFS052E09+ CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTCTTAAGCTCCCTCGCAGGCTCCCGTCC
JMFS115D12+ CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTCTTAAGCTCCCTCGCAGGCTCCCGCCC
JMSF002P01+ CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTCTTAAGCTCCCTCGCAGGCTCCCGCCC
JMSF031J22+ CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTCTTAAGCTCCCTCGCAGGCTCCCGCCC
JMSF020A12+ CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTCTTAAGCTCCCTCGCAGGCTCCCGCCC
JMSF033P06+ CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTNTTAAGCTCCCTCGCAGGCTCCCGCCC
____________________________________________________________
consensus CCAGTGCTCCTCCAGATTGAGTTGCTGTTTGCTCTTAAGCTCCCTCGCAGGCTCCCGCCC
. : . : . : . : . : . :
JMFS052E09+ AGACTGGCTCGTAAGCTCCCGCCTCGCAGTATTCCCAGAT
JMFS115D12+ AGACTGGCTCGTAAGCTCCCGCCTCGCAGTATTCCCAGATCCGCTGGCTCCATGCCCACA
JMSF002P01+ AGACTGGCTCGTAAGCTCCCGCCTCGCAGTATTCCCAGATCCGCTGGCTCCATGCCCACA
JMSF031J22+ AGACTGGCTCGTAAGCTCCCGCCTCGCAGTATTCCCAGATCCGCTGGCTCCATGCCCACA
JMSF020A12+ AGACTGCATCGTAAGCTCCCGCCTCGCAGTATTCCCAGATCCGCTGGCTCCATGCCCACA
JMSF033P06+ AGACTGGCTCGTAAGCTCCCGCCTCGCAGTATTCCCAGATCCGCTGGCTCCATGCCCACA
____________________________________________________________
consensus AGACTGGCTCGTAAGCTCCCGCCTCGCAGTATTCCCAGATCCGCTGGCTCCATGCCCACA
. : . : . : . : . : . :
JMFS115D12+ CTTTCTTGATCAACAAAATCTTAGCTTTTTAGTTTTCTTGATCGGGTTTTGCCTTTTTCT
JMSF002P01+ CTTTCTTGATCAACAAAATCTTAGCTTTTTAGTTTTCTTGATCGGGTTTTGCCTTTTTCT
JMSF031J22+ CTTTCTTGATCAACAAAATCTTAGCTTTTTAGTTTTCTTGATCGGGTTTTGCCTTTTTCT
JMSF020A12+ CTTTCTTGATCAACAAAATCTTAGCTTTTTAGTTTTCTTGATCGGGTTTTGCCTTTTTCT
JMSF033P06+ CTTTCTTGATCAACAAAATCTTAGCTTTTTAGTTTTCTTGATCGGGTTTTGCCTTTTTCT
____________________________________________________________
consensus CTTTCTTGATCAACAAAATCTTAGCTTTTTAGTTTTCTTGATCGGGTTTTGCCTTTTTCT
. : . : . : . : . : . :
JMFS115D12+ CTATCCCAGTGGATTGAAAGAACAAAAGAATGA
JMSF002P01+ CTCTCCCAG
JMSF031J22+ CTCTCCCAGTGGATTGAAAGAACAAAAGAATGAGAATTGAGAAGCAGAGTGTTTTGACTC
JMSF020A12+ CTCTCCCAGTGGATTGAAAGAACAAAAGAATGAGAATTGAGAAGCAGAGTGTTTTGACTC
JMSF033P06+ CTCTCCCAGTGGATTGAAAGAACAAAAGAATGAGAATTGAGAAGCAGAGTGTTTTGACTC
____________________________________________________________
consensus CTCTCCCAGTGGATTGAAAGAACAAAAGAATGAGAATTGAGAAGCAGAGTGTTTTGACTC