Contig 003757:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF033G01Sequence720003757 (2)754007174 (2)ref|XP_007043020.1|4e-34Chloroplast-targeted copper chaperone protein [Theobroma cacao] gb|EOX98851.1| C
JMSF035O18Sequence720003757 (2)683007174 (2)ref|XP_007043020.1|1e-34Chloroplast-targeted copper chaperone protein [Theobroma cacao] gb|EOX98851.1| C

Alignment

This contig is upended


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JMSF033G01+                                                                      C
                      ____________________________________________________________
consensus                                                                        C
 
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JMSF035O18+                    TGCGCTTTTCTCGACGACACTCACCGCCGTTACCATTTTTTACGGGTGCCA
JMSF033G01+           GGTGGTTTNTGCGCTTTTCTCGACGACACTCACCGCCGTTACCA-TTTTTACGGGTGCCA
                      ____________________________________________________________
consensus             GGTGGTTTNTGCGCTTTTCTCGACGACACTCACCGCCGTTACCATTTTTTACGGGTGCCA
 
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JMSF035O18+           GTGCGAGTGAGGCGGCGGAGCAGCCGCCGGTAAATAATAACGTCTTGCCACTACGCCTCG
JMSF033G01+           GTGCGAGTGAGGCGGCGGAGCAGCCGCCGGTAAATAATAACGTCTTGCCACTACGCCTCG
                      ____________________________________________________________
consensus             GTGCGAGTGAGGCGGCGGAGCAGCCGCCGGTAAATAATAACGTCTTGCCACTACGCCTCG
 
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JMSF035O18+           TCGGTGGTTTCCGCGCTTTCTCTNGACGACAGTCAACGCCGCCGCTACCTTTTCTGACGG
JMSF033G01+           TCGGTGGTTTCCGCGCTTTCTCTCGACGACAGTCAACGCCGCCGCTACCTTTTCTGACGG
                      ____________________________________________________________
consensus             TCGGTGGTTTCCGCGCTTTCTCTCGACGACAGTCAACGCCGCCGCTACCTTTTCTGACGG
 
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JMSF035O18+           GTGCCAGTGCCAGTGAGGCGGCGGAGCAGCCGCCGGCAAATAGTAACGCCTTGCCACCAC
JMSF033G01+           GTGCCAGTGCCAGTGAGGCGGCGGAGCAGCCGCCGGCAAATAGTAACGCCTTGCCACCAC
                      ____________________________________________________________
consensus             GTGCCAGTGCCAGTGAGGCGGCGGAGCAGCCGCCGGCAAATAGTAACGCCTTGCCACCAC
 
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JMSF035O18+           GCCTCGCCGGCGACGGCGGCGACGCCGCGTAGTCGCGGAATGTGGAGCGTGGTTTCTGGA
JMSF033G01+           GCCTCGCCGGCGACGGCGGCGACGCCGCGTAGTCGCGGAATGTGGAGCGTGGTTTCTGGA
                      ____________________________________________________________
consensus             GCCTCGCCGGCGACGGCGGCGACGCCGCGTAGTCGCGGAATGTGGAGCGTGGTTTCTGGA
 
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JMSF035O18+           CTAACCGCATGTACTTCTCATTGCCTATAAAAGGCGAAATTCTCTTGTCCCCAGAACCCT
JMSF033G01+           CTAACCGCATGTACTTCTCATTGCCTATAAAAGGCGAAATTCTCTTGTCCCCAGAACCCT
                      ____________________________________________________________
consensus             CTAACCGCATGTACTTCTCATTGCCTATAAAAGGCGAAATTCTCTTGTCCCCAGAACCCT
 
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JMSF035O18+           CGTATCTCGACTCAACAGAATAGTAAACTGGTAAATTACGATAATTCAACGGTCCATTAG
JMSF033G01+           CGTATCTCGACTCAACAGAATAGTAAACTGGTAAATTACGATAATTCAACGGTCCATTAG
                      ____________________________________________________________
consensus             CGTATCTCGACTCAACAGAATAGTAAACTGGTAAATTACGATAATTCAACGGTCCATTAG
 
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JMSF035O18+           ACGGGAGGAGCATGTATTTTTCATTACTAGGGACGAAGAGCGTCGGGCGTTGATGATGCC
JMSF033G01+           ACGGGAGGAGCATGTATTTTTCATTACTAGGGACGAAGAGCGTCGGGCGTTGATGATGCC
                      ____________________________________________________________
consensus             ACGGGAGGAGCATGTATTTTTCATTACTAGGGACGAAGAGCGTCGGGCGTTGATGATGCC
 
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JMSF035O18+           GGCGAGTCGGCGGCGTGGCAGCGGCGGCGCGGGAACCAGGGGGTGTCATGCTGCGGCGGC
JMSF033G01+           GGCGAGTCGGCGGCGTGGCAGCGGCGGCGCGGGAACCAGGGGGTGTCATGCTGCGGCGGC
                      ____________________________________________________________
consensus             GGCGAGTCGGCGGCGTGGCAGCGGCGGCGCGGGAACCAGGGGGTGTCATGCTGCGGCGGC
 
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JMSF035O18+           GGAGAACCGCCGTGGCTTTGTCGGACCGGCATGAAAACCCTCTCATCATATTCATAGTCT
JMSF033G01+           GGAGAACCGCCGTGGCTTTGTCGGACCGGCATGAAAACCCTCTCATCATATTCATAGTCT
                      ____________________________________________________________
consensus             GGAGAACCGCCGTGGCTTTGTCGGACCGGCATGAAAACCCTCTCATCATATTCATAGTCT
 
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JMSF035O18+           TCCCCGTCGTCGATCCTAACACGGCCTTCTTCATCTTGAATTTCATGCTACCTTAAATCT
JMSF033G01+           TCCCCGTCGTCGATCCTAACACGGCCTTCTTCATCTTGAATTTCATGCTACCTTAAATCT
                      ____________________________________________________________
consensus             TCCCCGTCGTCGATCCTAACACGGCCTTCTTCATCTTGAATTTCATGCTACCTTAAATCT
 
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JMSF035O18+           TCCGAGGTCGGCCGGTGAATAGTAATTGGGGACGCCGGAGAATTTAAAACTAGGTG    
JMSF033G01+           TCCGAGGTCGGCCGGTGAATAGTAATTGGGGACGCCGGAGAATTTAAAACTAGGTGCAGC
                      ____________________________________________________________
consensus             TCCGAGGTCGGCCGGTGAATAGTAATTGGGGACGCCGGAGAATTTAAAACTAGGTGCAGC