Contig 003753:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005A17Sequence501003753 (3)ref|XP_009608653.1|9e-50PREDICTED: protein TPLATE [Nicotiana tomentosiformis]678007163 (2)ref|XP_009608653.1|3e-88PREDICTED: protein TPLATE [Nicotiana tomentosiformis]
JMFS009B11Sequence588003753 (3)ref|XP_004251071.1|2e-71PREDICTED: protein TPLATE [Solanum lycopersicum]
JMSF032O01Sequence649003753 (3)ref|XP_004251071.1|2e-85PREDICTED: protein TPLATE [Solanum lycopersicum]755007163 (2)ref|XP_009608653.1|4e-75PREDICTED: protein TPLATE [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF032O01+                      CTCCACCAATTGGAAACCCTATCGAGCAAGTTCATGTTATTCTCACAGA
                      ____________________________________________________________
consensus                        CTCCACCAATTGGAAACCCTATCGAGCAAGTTCATGTTATTCTCACAGA
 
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JMFS009B11+                 CGAGATCGTCACGCGCGAGGATGCAACCGAGCGTCTCCGTGATGGCGAATCGTA
JMSF032O01+           GAGTCACGAGATCGTCACGCGCGAGGATGCAACCGAGCGTCTCCGTGATGGCGAATCGTA
                      ____________________________________________________________
consensus             GAGTCACGAGATCGTCACGCGCGAGGATGCAACCGAGCGTCTCCGTGATGGCGAATCGTA
 
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JMFS009B11+           GGTTGTCGGAGGGGGAGTCGAAGCAGCTGGAGATTTGCTTGTTACAGTCAGATATGAGTT
JMFF005A17+                                                 TTGTTACAGTCAGATATGAGTT
JMSF032O01+           GGTTGTCGGAGGGGGAGTCGAAGCAGCTGGAGATTTGCTTGTTACAGTCAGATATGAGTT
                      ____________________________________________________________
consensus             GGTTGTCGGAGGGGGAGTCGAAGCAGCTGGAGATTTGCTTGTTACAGTCAGATATGAGTT
 
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JMFS009B11+           TGCCGAGCCGGAACGAGGGGATAGCCGCGAGGATGGAGACGGCGGCTGCAGTTACATCCG
JMFF005A17+           TGCCGAGCCGGAACGAGGGGATAGCCGCGAGGATGGAGACGGCGGCTGCAGTTACATCCG
JMSF032O01+           TGCCGAGCCGGAACGAGGGGATAGCCGCGAGGATGGAGACGGCGGCTGCAGTTACATCCG
                      ____________________________________________________________
consensus             TGCCGAGCCGGAACGAGGGGATAGCCGCGAGGATGGAGACGGCGGCTGCAGTTACATCCG
 
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JMFS009B11+           GGTCAGGGAACTCGAGATCGTTGCGAATTCCAGTACAGACAATCTCCCATAAGTCGGCGG
JMFF005A17+           GGTCAGGGAACTCGAGATCGTTGCGAATTCCAGTACAGACAATCTCCCATAAGTCGGCGG
JMSF032O01+           GGTCAGGGAACTCGAGATCGTTGCGAATTCCAGTACAGACAATCTCCCATAAGTCGGCGG
                      ____________________________________________________________
consensus             GGTCAGGGAACTCGAGATCGTTGCGAATTCCAGTACAGACAATCTCCCATAAGTCGGCGG
 
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JMFS009B11+           TGAGGCGAGTTGATCTGATCAGGTCGAAAGCGAGTTTCTTAGAAATGGCAGAGGCAGGAG
JMFF005A17+           TGAGGCGAGTTGATCTGATCAGGTCGAAAGCGAGTTTCTTAGAAATGGCAGAGGCAGGAG
JMSF032O01+           TGAGGCGAGTTGATCTGATCAGGTCGAAAGCGAGTTTCTTAGAAATGGCAGAGGCAGGAG
                      ____________________________________________________________
consensus             TGAGGCGAGTTGATCTGATCAGGTCGAAAGCGAGTTTCTTAGAAATGGCAGAGGCAGGAG
 
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JMFS009B11+           CGGCCACGATCTCCTCCACGGCGGATTTTGCAATGATGGAGATATCACGACCGGCCGCCG
JMFF005A17+           CGGCCACGATCTCCTCCACGGCGGATTTTGCAATGATGGAGATATCACGACCGGCCGCCG
JMSF032O01+           CGGCCACGATCTCCTCCACGGCGGATTTTGCAATGATGGAGATATCACGACCGGCCGCCG
                      ____________________________________________________________
consensus             CGGCCACGATCTCCTCCACGGCGGATTTTGCAATGATGGAGATATCACGACCGGCCGCCG
 
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JMFS009B11+           ATTGCTGTAGGGCTTGAAGAAGAGCTCCAGATTGCCGGAGGGCGTCATTAGACCGGAGGT
JMFF005A17+           ATTGCTGTAGGGCTTGAAGAAGAGCTCCAGATTGCCGGAGGGCGTCATTAGACCGGAGGT
JMSF032O01+           ATTGCTGTAGGGCTTGAAGAAGAGCTCCAGATTGCCGGAGGGCGTCATTAGACCGGAGGT
                      ____________________________________________________________
consensus             ATTGCTGTAGGGCTTGAAGAAGAGCTCCAGATTGCCGGAGGGCGTCATTAGACCGGAGGT
 
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JMFS009B11+           CAGCTTGGATCTGAGCGAACAGTATATCCATCTATCCTCCGGAAAGCGTAACTCGTAGTG
JMFF005A17+           CAGCTTGGATCTGAGCGAACAGTATATCCATCTATCCTCCGGAAAGCGTAACTCGTAGTG
JMSF032O01+           CAGCTTGGATCTGAGCGAACAGTATATCCATCTATCCTCCGGAAAGCGTAACTCGTAGTG
                      ____________________________________________________________
consensus             CAGCTTGGATCTGAGCGAACAGTATATCCATCTATCCTCCGGAAAGCGTAACTCGTAGTG
 
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JMFS009B11+           AAACTCCGGCGAAGAAGAATTTCCGGCAGGATCTCAGACTTCCAACTCCTATAGTCCTGT
JMFF005A17+           AAACTCCGGCGAAGAAGAATTTCCGGCAGGATCTCAGACTTCCAACTCCTATAGTCCTGT
JMSF032O01+           AAACTCCGGCGAAGAAGAATTTCCGGCAGGATCTCAGACTTCCAACTCCTATAGTCCTGT
                      ____________________________________________________________
consensus             AAACTCCGGCGAAGAAGAATTTCCGGCAGGATCTCAGACTTCCAACTCCTATAGTCCTGT
 
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JMFS009B11+           TGCTACACCGGGCATCTCTTTGCAGTCTTTGTTCCTCGTCGAGTTTTAGTTTCA      
JMFF005A17+           TGCTACACCGGGCATCTCTTTGCAGTCTTTGTTCCTCGTCGAGTTTTAGTTTCA      
JMSF032O01+           TGCTACACCGGGCATCTCTTTGCAGTCTTTGTTCCTCGTCGAGTTTTAGTTTCACTGTTC
                      ____________________________________________________________
consensus             TGCTACACCGGGCATCTCTTTGCAGTCTTTGTTCCTCGTCGAGTTTTAGTTTCACTGTTC