Contig 003752:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006O04Sequence300003752 (2)ref|XP_009775271.1|2e-33PREDICTED: E2F transcription factor-like E2FE isoform X2 [Nicotiana sylvestris]388004308 (2)ref|XP_006345002.1|2e-27PREDICTED: E2F transcription factor-like E2FE-like isoform X2 [Solanum tuberosu
JMSF032N07Sequence631003752 (2)ref|XP_009775271.1|1e-53PREDICTED: E2F transcription factor-like E2FE isoform X2 [Nicotiana sylvestris]757004308 (2)ref|XP_009607525.1|2e-90PREDICTED: E2F transcription factor-like E2FE [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF032N07+                                        ATTGTCAGGCTTAGAGGAGTCTGCCAGCTTC
                      ____________________________________________________________
consensus                                          ATTGTCAGGCTTAGAGGAGTCTGCCAGCTTC
 
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JMSF032N07+           GGAGCAGAAATGGAGTCTGATTTCTCATTCTGACTTGAAACATTAGGGTTTGAGTGTCTG
                      ____________________________________________________________
consensus             GGAGCAGAAATGGAGTCTGATTTCTCATTCTGACTTGAAACATTAGGGTTTGAGTGTCTG
 
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JMSF032N07+           TCATCTTCTTCATCATCTGAAACTTGGACAGAGACATCTCCACTATATGCACTAAAGCTC
                      ____________________________________________________________
consensus             TCATCTTCTTCATCATCTGAAACTTGGACAGAGACATCTCCACTATATGCACTAAAGCTC
 
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JMSF032N07+           TCTTTTAGACCTTCCTCCTTTAGTTCTTCAAAAGCTCTAGGAATTGCTTCAAACCCTTTC
                      ____________________________________________________________
consensus             TCTTTTAGACCTTCCTCCTTTAGTTCTTCAAAAGCTCTAGGAATTGCTTCAAACCCTTTC
 
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JMSF006O04+                                       AAAGAACACCAACACTTTCAAGAACATTCACA
JMSF032N07+           CATGTATACCTATTCTTTGCCTTCCTTGAAAGAACACCAACACTTTCAAGAACATTCACA
                      ____________________________________________________________
consensus             CATGTATACCTATTCTTTGCCTTCCTTGAAAGAACACCAACACTTTCAAGAACATTCACA
 
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JMSF006O04+           ATGTCATAGATCCTCCTCCTTTCAACCCCTAGTTGCCTTGCTGCATCATCAAGCCCAATA
JMSF032N07+           ATGTCATAGATCCTCCTCCTTTCAACCCCTAGTTGCCTTGCTGCATCATCAAGCCCAATA
                      ____________________________________________________________
consensus             ATGTCATAGATCCTCCTCCTTTCAACCCCTAGTTGCCTTGCTGCATCATCAAGCCCAATA
 
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JMSF006O04+           GTTTCTACACCTTCACGGTTATACAAGCTCAAAAAATTGGAACACAGGAGGCCGAGAGAT
JMSF032N07+           GTTTCTACACCTTCACGGTTATACAAGCTCAAAAAATTGGAACACAGGAGGCCGAGAGAT
                      ____________________________________________________________
consensus             GTTTCTACACCTTCACGGTTATACAAGCTCAAAAAATTGGAACACAGGAGGCCGAGAGAT
 
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JMSF006O04+           TTCTGTTTACGGCAATAAACAGATCCAGAATCCTTGGAAGCAGAAGAAACTAAAGCCATT
JMSF032N07+           TTCTGTTTACGGCAATAAACAGATCCAGAATCCTTGGAAGCAGAAGAAACTAAAGCCATT
                      ____________________________________________________________
consensus             TTCTGTTTACGGCAATAAACAGATCCAGAATCCTTGGAAGCAGAAGAAACTAAAGCCATT
 
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JMSF006O04+           GCTACAGAGATCTAAATCCAAACCCTCTCCTCCACGAATTCAGCTTCCACGTATGCCTGT
JMSF032N07+           GCTACAGAGATCTAAATCCAAACCCTCTCCTCCACGAATTCAGCTTCCACGTATGCCTGT
                      ____________________________________________________________
consensus             GCTACAGAGATCTAAATCCAAACCCTCTCCTCCACGAATTCAGCTTCCACGTATGCCTGT
 
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JMSF006O04+           AGATCTGAAATTTTAACGATGAAGCGG                                 
JMSF032N07+           AGATCTGAGATTTTAACGATGAAGCGGAGAGAGAAGTAGCTTGAATTTGGGGCAGTTAAG
                      ____________________________________________________________
consensus             AGATCTGAGATTTTAACGATGAAGCGGAGAGAGAAGTAGCTTGAATTTGGGGCAGTTAAG
 
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JMSF032N07+           AAAGGGTTGAGCTGTTGACAATGGCGGGGTGGGAAAACAGAAAAGAAAAAAAAGGAGAGC
                      ____________________________________________________________
consensus             AAAGGGTTGAGCTGTTGACAATGGCGGGGTGGGAAAACAGAAAAGAAAAAAAAGGAGAGC