Contig 003749:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041A23Sequence651003749 (10)ref|XP_009779793.1|1e-110PREDICTED: outer envelope pore protein 24A, chloroplastic [Nicotiana sylvestris569003749 (10)emb|CDP07535.1|1e-34unnamed protein product [Coffea canephora]
JMFN004H08Sequence672003749 (10)ref|XP_009779793.1|2e-105PREDICTED: outer envelope pore protein 24A, chloroplastic [Nicotiana sylvestris
JMFN029M01Sequence627003749 (10)ref|XP_009779793.1|2e-106PREDICTED: outer envelope pore protein 24A, chloroplastic [Nicotiana sylvestris
JMSF007F09Sequence457003749 (10)ref|XP_009779793.1|2e-74PREDICTED: outer envelope pore protein 24A, chloroplastic [Nicotiana sylvestris763003749 (10)ref|XP_009779793.1|5e-111PREDICTED: outer envelope pore protein 24A, chloroplastic [Nicotiana sylvestris
JMSF031B16Sequence606003749 (10)ref|XP_004238246.1|5e-107PREDICTED: outer envelope pore protein 24A, chloroplastic [Solanum lycopersicum734003749 (10)emb|CDP07535.1|2e-80unnamed protein product [Coffea canephora]
JMSF032G10Sequence626003749 (10)ref|XP_004238246.1|2e-106PREDICTED: outer envelope pore protein 24A, chloroplastic [Solanum lycopersicum716003749 (10)emb|CDP07535.1|8e-103unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF041A23- GTGTATAACCAATAGACTACATTCATTTTATTCAGTGGGCATGAAAATGGTGCTT
rJMSF031B16- TGGTGCTT
                      ____________________________________________________________
consensus GTGTATAACCAATAGACTACATTCATTTTATTCAGTGGGCATGAAAATGGTGCTT
 
. : . : . : . : . : . :
rJMFF041A23- GGCAAGCTGCTGAAATCATCAGTAACCTAACCAAAACATTTTTTCTAAGACTTGATGCAA
rJMSF031B16- GGCAAGCTGCTGAAATCATCAGTAACCTAACCAAAACATTTTTTCTAAGACTTGATGCAA
                      ____________________________________________________________
consensus GGCAAGCTGCTGAAATCATCAGTAACCTAACCAAAACATTTTTTCTAAGACTTGATGCAA
 
. : . : . : . : . : . :
rJMFF041A23- AGGTTTCTTGAACAATGGACACAGTATCTAAACAAAACCATTGGAAAATAAAATTTTGGA
rJMSF031B16- AGGTTTCTTGAACAATGGACACAGTATCTAAACAAAACCATTGGAAAATAAAATTTTGGA
rJMSF032G10- TTTTGGA
                      ____________________________________________________________
consensus AGGTTTCTTGAACAATGGACACAGTATCTAAACAAAACCATTGGAAAATAAAATTTTGGA
 
. : . : . : . : . : . :
rJMFF041A23- TTTGTCCACGACACAATATTCGGCTCCATGTTTTGAATACACCGACAATATTAGCTGTGG
rJMSF031B16- TTTGTCCACGACACAATATTCGGCTCCATGTTTTGAATACACCGACAATATTAGCTGTGG
rJMSF032G10- TTTGTCCACGACACAATATTCGGCTCCATGTTTTGAATACACCGACAATATTAGCTGTGG
rJMSF007F09- GTTTTGAATACACCGACAATATTAGCTGTGG
                      ____________________________________________________________
consensus TTTGTCCACGACACAATATTCGGCTCCATGTTTTGAATACACCGACAATATTAGCTGTGG
 
. : . : . : . : . : . :
rJMFF041A23- AAAGAAGCCAGACGATGATAGTCACTAGGTCAATGAATATGGTTTGTTTGTATGATTGCA
rJMSF031B16- AAAGAAGCCAGACGATGATAGTCACTAGGTCAATGAATATGGTTTGTTTGTATGATTGCA
rJMSF032G10- AAAGAAGCCAGACGATGATAGTCACTAGGTCAATGAATATGGTTTGTTTGTATGATTGCA
JMFN004H08+ TTGTTTGTATGATGNCA
rJMSF007F09- AAAGAAGCCAGACGATGATAGTCACTAGGTCAATGAATATGGTTTGTTTGTATGATTGCA
                      ____________________________________________________________
consensus AAAGAAGCCAGACGATGATAGTCACTAGGTCAATGAATATGGTTTGTTTGTATGATTGCA
 
. : . : . : . : . : . :
rJMFF041A23- GCAAGAAGATGAAAACGACAGAATCATGATACAGAGAAGCATCACATTTCAAAGTCCCAG
rJMSF031B16- GCAAGAAGATGAAAACGACAGAATCATGATACAGAGAAGCATCACATTTCAAAGTCCCAG
rJMSF032G10- GCAAGAAGATGAAAACGACAGAATCATGATACAGAGAAGCATCACATTTCAAAGTCCCAG
JMFN004H08+ GCAAGAAGATGAAAACGACAGAATCATGATACAGAGAAGCATCACATTTCANAGTCNCAG
rJMSF007F09- GCAAGAAGATGAAAACGACAGAATCATGATACAGAGAAGCTTCACATTTCAAAGTCCCAG
                      ____________________________________________________________
consensus GCAAGAAGATGAAAACGACAGAATCATGATACAGAGAAGCATCACATTTCAAAGTCCCAG
 
. : . : . : . : . : . :
rJMFF041A23- GTGCTCTCGGCAATAACCTTTGGCCTTTTAAGATCCTCGGCCAAATTAAGAGATGCAGAA
rJMSF031B16- GTGCTCTCGGCAATAACCTTTGGCCTTTTAAGATCCTCGGCCAAATTAAGAGATGCAGAA
rJMSF032G10- GTGCTCTCGGCAATAACCTTTGGCCTTTTAAGATCCTCGGCCAAATTAAGAGATGCAGAA
JMFN004H08+ GTGCTCTCGGCAATAACCTTTGGCCTTNTAAGATCCTCGGCCAAATTAAGAGATGCAGAA
rJMSF007F09- GTGCTCTCGGCAATAACCTTTGGCCTTTTAAGATCCTCGGCCAAATTAAGAGATGCAGAA
JMSF031B16+ CCTCGGCCAAATTAAGAGATGCAGAA
JMFN029M01+ GCAATAACCTTGGCCCTTTNAAGATCCTCGGCCAAATTAAGAGATGCAGAA
JMFF041A23+ CTCTCGGCAATAACCTTTGGCCTTTTAAGATCCTCGGCCAAATTAAGAGATGCAGAA
JMSF032G10+ TCGGCCAAATTAAGAGATGCAGAA
                      ____________________________________________________________
consensus GTGCTCTCGGCAATAACCTTTGGCCTTTTAAGATCCTCGGCCAAATTAAGAGATGCAGAA
 
. : . : . : . : . : . :
rJMFF041A23- ATCTTGAAAGTGCCATTCAATTTGGAATTCCTGGACCATTCTAGGCCCAAGTTCTTGTTG
rJMSF031B16- ATCTTGAAAGTGCCATTCAATTTGGAATTCCTGGACCATTCTAGGCCCAAGTTCTTGTTG
rJMSF032G10- ATCTTGAAAGTGCCATTCAATTTGGAATTCCTGGACCATTCTAGGCCCAAGTTCTTGTTG
JMFN004H08+ ATCTTGAAAGTGCCATTCAATTTGGAATTCCTGGACCATTCTAGGCCCAAGTTCTTGTTG
rJMSF007F09- ATCTTGAAAGTGCCATTCAATTTGGAATTCCTGGACCATTCTAGGCCCAAGTTCTTGTTG
JMSF031B16+ ATCTTGAAAGTGCCATTCAATTTGGAATTCCTGGACCATTCTAGGCCCAAGTTCTTGTTG
JMFN029M01+ ATCTGAAAGTGCCCATTCAATTTGGAATTCCTGGACCATTCTAGGCCCAAGTTCTTGTTG
JMFF041A23+ ATCTTGAAAGTGCCATTCAATTTGGAATTCCTGGACCATTCTAGGCCCAAGTTCTTGTTG
JMSF032G10+ ATCTTGAAAGTGCCATTCAATTTGGAATTCCTGGACCATTCTAGGCCCAAGTTCTTGTTG
                      ____________________________________________________________
consensus ATCTTGAAAGTGCCATTCAATTTGGAATTCCTGGACCATTCTAGGCCCAAGTTCTTGTTG
 
. : . : . : . : . : . :
rJMFF041A23- GACGTCTGGAACATAGCTTTCAACACATCGTCCCCGTAAACCCTCTGCGAAATAGAGAAA
rJMSF031B16- GACGTCTGGAACATAGCTTTCAACACATCGTCCCCGTAAACCCTCTGCGAAATAGAGAAA
rJMSF032G10- GACGTCTGGAACATAGCTTTCAACACATCGTCCCCGTAAACCCTCTGCGAAATAGAGAAA
JMFN004H08+ GACGTCTGGAACATAGCTTTCAACACATCGTCCCCGTAAACCCTCTGCGAAATAGAGAAA
rJMSF007F09- GACGTCTGGAACATAGCTTTCAACACATCGTCCCCGTAAACCCTCTGCGAAATAGAGAAA
JMSF031B16+ GACGTCTGGAACATAGCTTTCAACACATCGTCCCCGTAAACCCTCTGCGAAATAGAGAAA
JMFN029M01+ GACGTCTGGAACATAGCTTTCAACACATCGTCCCCGTAAACCCTCTGCGAAATAGAGAAA
JMFF041A23+ GACGTCTGGAACATAGCTTTCAACACATCGTCCCCGTAAACCCTCTGCGAAATAGAGAAA
JMSF032G10+ GACGTCTGGAACATAGCTTTCAACACATCGTCCCCGTAAACCCTCTGCGAAATAGAGAAA
                      ____________________________________________________________
consensus GACGTCTGGAACATAGCTTTCAACACATCGTCCCCGTAAACCCTCTGCGAAATAGAGAAA
 
. : . : . : . : . : . :
rJMFF041A23- TCCCAGGCATTCTTGGCGAAATCGTAGCTGGGCT
rJMSF031B16- TCCCAGGCATTCTTGGCGAAATCGTAGCTGGGCTCAAAGGTAGTCTGCCCCTTGTGCACA
rJMSF032G10- TCCCAGGCATTCTTGGCGAAATCGTAGCTGGGCTCAAAGGTAGTCTGCCCCTTGTGCACA
JMFN004H08+ TCCCAGGCATTCTTGGCGAAATCGTAGCTGGGCTCAAAGGTAGTCTGCCCCTTGTGCACA
rJMSF007F09- TCCCAGGCATTCTTGGCGAAATCGTAGCTGGGCTCAAAGGTAGTCTGCCCCTTGTGCACA
JMSF031B16+ TCCCAGGCATTCTTGGCGAAATCGTAGCTGGGCTCAAAGGTAGTCTGCCCCTTGTGCACA
JMFN029M01+ TCCCAGGCATTCTTGGCGAAATCGTAGCTGGGCTCAAAGGTAGTCTGCCCCTTGTGCACA
JMFF041A23+ TCCCAGGCATTCTTGGCGAAATCGTAGCTGGGCTCAAAGGTAGTCTGCCCCTTGTGCACA
JMSF007F09+ GTAGCTGGGCTCAAAGGTAGTCTGCCCCTTGTGCACA
JMSF032G10+ TCCCAGGCATTCTTGGCGAAATCGTAGCTGGGCTCAAAGGTAGTCTGCCCCTTGTGCACA
                      ____________________________________________________________
consensus TCCCAGGCATTCTTGGCGAAATCGTAGCTGGGCTCAAAGGTAGTCTGCCCCTTGTGCACA
 
. : . : . : . : . : . :
rJMSF031B16- TAAGTATACTTAAGCTTACAATTCCCGGAGCCGATCAAGTGATTAGCCGAAACCTTGTTA
rJMSF032G10- TAAGTATACTTAAGCTTACAATTCCCGGAGCCGATCAAGTGATTAGCCGAAACCTTGTTA
JMFN004H08+ TAAGTATACTTAAGCTTACAATTCCCGGAGCCGATCAAGTGATTAGCCGAAACCTTGTTA
rJMSF007F09- TAAGTATACTTAAGCTTACAATTCCCGGAGCCGATCAAGTGATTAGCCGAAACCTTGTTA
JMSF031B16+ TAAGTATACTTAAGCTTACAATTCCCGGAGCCGATCAAGTGATTAGCCGAAACCTTGTTA
JMFN029M01+ TAAGTATACTTAAGCTTACAATTCCCGGAGCCGATCAAGTGATTAGCCGAAACCTTGTTA
JMFF041A23+ TAAGTATACTTAAGCTTACAATTCCCGGAGCCGATCAAGTGATTAGCCGAAACCTTGTTA
JMSF007F09+ TAAGTATACTTAAGCTTACAATTCCCGGAGCCGATCAAGTGATTAGCCGAAACCTTGTTA
JMSF032G10+ TAAGTATACTTAAGCTTACAATTCCCGGAGCCGATCAAGTGATTAGCCGAAACCTTGTTA
                      ____________________________________________________________
consensus TAAGTATACTTAAGCTTACAATTCCCGGAGCCGATCAAGTGATTAGCCGAAACCTTGTTA
 
. : . : . : . : . : . :
rJMSF031B16- GCCGGATCCAAAACCAAAGTCCCATCCACCGTTGTCCGTTTATCTCCTTTGAAGTGGATG
rJMSF032G10- GCCGGATCCAAAACCAAAGTCCCATCCACCGTTGTCCGTTTATCTCCTTTGAAGTGGATG
JMFN004H08+ GCCGGATCCAAAACCAAAGTCCCATCCACCGTTGTCCGTTTATCTCCTTTGAAGTGGATG
rJMSF007F09- GCCGGATCCAAAACCAAAGTCCCATCCACCGTTGTCCGTTTATCTCCTTTGAAGTGGATG
JMSF031B16+ GCCGGATCCAAAACCAAAGTCCCATCCACCGTTGTCCGTTTATCTCCTTTGAAGTGGATG
JMFN029M01+ GCCGGATCCAAAACCAAAGTCCCATCCACCGTTGTCCGTTTATCTCCTTTGAAGTGGATG
JMFF041A23+ GCCGGATCCAAAACCAAAGTCCCATCCACCGTTGTCCGTTTATCTCCTTTGAAGTGGATG
JMSF007F09+ GCCGGATCCAAAACCAAAGTCCCATCCACCGTTGTCCGTTTATCTCCTTTGAAGTGGATG
JMSF032G10+ GCCGGATCCAAAACCAAAGTCCCATCCACCGTTGTCCGTTTATCTCCTTTGAAGTGGATG
                      ____________________________________________________________
consensus GCCGGATCCAAAACCAAAGTCCCATCCACCGTTGTCCGTTTATCTCCTTTGAAGTGGATG
 
. : . : . : . : . : . :
rJMSF031B16- TAATTCAGGTTCAACGGCTTCTCCAAAACCCTAACCGTACTCATAAATTGAAACCTAAAA
rJMSF032G10- TAATTCAAGTTCAACGGCTTCTCCAAAACCCTAACCGTACTCATAAATTGAAACCTAAAA
JMFN004H08+ TAATTCAAGTTCAACGGCTTCTCCAAAACCCTAACCGTACTCATAAATTGAAACCTAAAA
rJMSF007F09- TAATTCAAGTTCAACGGCTTCTCCAAAACCCTAACCGTACTCATAAATTGAAACCTAAAA
JMSF031B16+ TAATTCAAGTTCAACGGCTTCTCCAAAACCCTAACCGTACTCATAAATTGAAACCTAAAA
JMFN029M01+ TAATTCAAGTTCAACGGCTTCTCCAAAACCCTAACCGTACTCATAAATTGAAACCTAAAA
JMFF041A23+ TAATTCAAGTTCAACGGCTTCTCCAAAACCCTAACCGTACTCATAAATTGAAACCTAAAA
JMSF007F09+ TAATTCAAGTTCAACGGCTTCTCCAAAACCCTAACCGTACTCATAAATTGAAACCTAAAA
JMSF032G10+ TAATTCAAGTTCAACGGCTTCTCCAAAACCCTAACCGTACTCATAAATTGAAACCTAAAA
                      ____________________________________________________________
consensus TAATTCAAGTTCAACGGCTTCTCCAAAACCCTAACCGTACTCATAAATTGAAACCTAAAA
 
. : . : . : . : . : . :
rJMSF031B16- TCCTTG
rJMSF032G10- TCCTTGTTGGGGACGTTGTAGTCGACAATGAAAGAGCCAGGTTTCTCAAGTGAAAGAGCT
JMFN004H08+ TCCTTGTTGGGGACGTTGTAGTCGACAATGAAAGAGCCAGGTTTCTCAAGTGAAAGAGCT
rJMSF007F09- TCCTTGTTGGGGACGTTGTAGTCGACAATGAAAGAGCCAGGTTTCTCAAGTGAAAGAGCT
JMSF031B16+ TCCTTGTTGGGGACGTTGTAGTCGACAATGAAAGAGCCAGGTTTCTCAAGTGAAAGAGCT
JMFN029M01+ TCCTTGTTGGGGACGTTGTAGTCGACAATGAAAGAGCCAGGTTTCTCAAGTGAAAGAGCT
JMFF041A23+ TCCTTGTTGGGGACGTTGTAGTCGACAATGAAAGAGCCAGGTTTCTCAAGTGAAAGAGCT
JMSF007F09+ TCCTTGTTGGGGACGTTGTAGTCGACAATGAAAGAGCCAGGTTTCTCAAGTGAAAGAGCT
JMSF032G10+ TCCTTGTTGGGGACGTTGTAGTCGACAATGAAAGAGCCAGGTTTCTCAAGTGAAAGAGCT
                      ____________________________________________________________
consensus TCCTTGTTGGGGACGTTGTAGTCGACAATGAAAGAGCCAGGTTTCTCAAGTGAAAGAGCT
 
. : . : . : . : . : . :
rJMSF032G10- AAGCCGTTCAAGGAGGGGCCTTTGACGACGGTGGCGTCAGTCATGGTAG
JMFN004H08+ AAGCCGTTCAAGGAGGGGCCTTTGACGACGGTGGCGTCAGTCATGGTAGCTCGGAGTTTG
rJMSF007F09- AAGCCGTTCAAGGAGGGGCCTTTGACGACGGTGGCGTCAGTCATGGTAGCTCGGAGTTTG
JMSF031B16+ AAGCCGTTCAAGGAGGGGCCTTTGACGACGGTGGCGTCAGTCATGGTAGCTCGGAGTTTG
JMFN029M01+ AAGCCGTTCAAGGAGGGGCCTTTGACGACGGTGGCGTCAGTCATGGTAGCTCGGAGTTTG
JMFF041A23+ AAGCCGTTCAAGGAGGGGCCTTTGACGACGGTGGCGTCAGTCATGGTAGCTCGGAGTTTG
JMSF007F09+ AAGCCGTTCAAGGAGGGGCCTTTGACGACGGTGGCGTCAGTCATGGTAGCTCGGAGTTTG
JMSF032G10+ AAGCCGTTCAAGGAGGGGCCTTTGACGACGGTGGCGTCAGTCATGGTAGCTCGGAGTTTG
                      ____________________________________________________________
consensus AAGCCGTTCAAGGAGGGGCCTTTGACGACGGTGGCGTCAGTCATGGTAGCTCGGAGTTTG
 
. : . : . : . : . : . :
JMFN004H08+ ATGTCGCCGGCGTTGACGGAGACAGTGGCGCCGGCCGCC
rJMSF007F09- ATGTCGCCGGCGTTGACGGAGACAGTGGCGCCGGCCGCCATTTTGTCGAGGTCATAT
JMSF031B16+ ATGTCGCCGGCGTTGACGGAGACAGTGGCGCCGGCCGCCATTTTGTCGAGGTCATATCGG
JMFN029M01+ ATGTCGCCGGCGTTGACGGAGACAGTGGCGCCGGCCGCCATTTTGTCGAGGTCATATCGG
JMFF041A23+ ATGTCGCCGGCGTTGACGGAGACAGTGGCGCCGGCCGCCATTTTGTCGAGGTCATATCGG
JMSF007F09+ ATGTCGCCGGCGTTGACGGAGACAGTGGCGCCGGCCGCCATTTTGTCGAGGTCATATCGG
JMSF032G10+ ATGTCGCCGGCGTTGACGGAGACAGTGGCGCCGGCCGCCATTTTGTCGAGGTCATATCGG
                      ____________________________________________________________
consensus ATGTCGCCGGCGTTGACGGAGACAGTGGCGCCGGCCGCCATTTTGTCGAGGTCATATCGG
 
. : . : . : . : . : . :
JMSF031B16+ GTTTTGAGCGAGCCCTTCATTCTCTCCGAGAGAGAAGCT
JMFN029M01+ GTTTTGAGCGAGCCCTTCATTCTCTCCGAGAGAGAA
JMFF041A23+ GTTTTGAGCGAGCCCTTCATTATCTCCGAGAGAGAAGCTAGATG
JMSF007F09+ GTTTTGAGCGAGCCCTTCATTCTCTCCGAGAGAGAAGCTAGATG
JMSF032G10+ GTTTTGAGCGAGCCCTTCATTCTCTCCGAGAGAGAAGCTAGATGGAGAGAAGAGTAAACC
                      ____________________________________________________________
consensus GTTTTGAGCGAGCCCTTCATTCTCTCCGAGAGAGAAGCTAGATGGAGAGAAGAGTAAACC