Contig 003747:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005I21Sequence503003747 (3)ref|XP_009616297.1|118PREDICTED: uncharacterized protein LOC104108863 [Nicotiana tomentosiformis]625001098 (4)ref|XP_009616297.1|169PREDICTED: uncharacterized protein LOC104108863 [Nicotiana tomentosiformis]
JMSF003A17Sequence186003747 (3)789001098 (4)ref|XP_009795881.1|190PREDICTED: uncharacterized protein LOC104242507 [Nicotiana sylvestris]
JMSF032D12Sequence671003747 (3)ref|XP_006426577.1|5e-35hypothetical protein CICLE_v10025780mg [Citrus clementina] gb|ESR39817.1| hypoth788001098 (4)ref|XP_009795881.1|302PREDICTED: uncharacterized protein LOC104242507 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF032D12+                                                            CAGCTGAAGTC
                      ____________________________________________________________
consensus                                                              CAGCTGAAGTC
 
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JMFF005I21+                                       AATGACCAGCTACAGATTTATCTGATTGAGGA
JMSF032D12+           ACTGCAACAGTTTCTCTCAGTGTAACAGAATGACCAGCTACAGATTTATCTGATTGAGGA
                      ____________________________________________________________
consensus             ACTGCAACAGTTTCTCTCAGTGTAACAGAATGACCAGCTACAGATTTATCTGATTGAGGA
 
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JMFF005I21+           GCCAAGACATGAACATTGTAGAGGCCTTGTAAAACCAGAGCACTGACGAGATAAGTAAGG
JMSF032D12+           GCCAAGACATGAACATTGTAGAGGCCTTGTAAAACCAGAGCACTGACGAGATAAGTAAGG
                      ____________________________________________________________
consensus             GCCAAGACATGAACATTGTAGAGGCCTTGTAAAACCAGAGCACTGACGAGATAAGTAAGG
 
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JMFF005I21+           CCAGGGGATTCAATCCCATCGGCATTGGTCACCAAAATAATAGGCTTCGAGCTATCGAGC
JMSF032D12+           CCAGGGGATTCAATCCCATCGGCATTGGTCACCAAAATAATAGGCTTCGAGCTATCGAGC
                      ____________________________________________________________
consensus             CCAGGGGATTCAATCCCATCGGCATTGGTCACCAAAATAATAGGCTTCGAGCTATCGAGC
 
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JMFF005I21+           TCGCCGGCAGCACCGCCGGAATTAGAATTCGAATTCGAAGATGAAGGCTCCGCCAAATCG
JMSF032D12+           TCGCCGGCAGCACCGCCGGAATTAGAATTCGAATTCGAAGATGAAGGCTCCGCCAAATCG
                      ____________________________________________________________
consensus             TCGCCGGCAGCACCGCCGGAATTAGAATTCGAATTCGAAGATGAAGGCTCCGCCAAATCG
 
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JMFF005I21+           TTCTTGTCGGACTCAGGTTGTCGATCCTGGTGTCCTTCTCCGGCCGCGGCGGCGCCACCT
JMSF032D12+           TTCTTGTCGGACTCAGGTTGTCGATCCTGGTGTCCTTCTCCGGCCGCGGCGGCGCCACCT
                      ____________________________________________________________
consensus             TTCTTGTCGGACTCAGGTTGTCGATCCTGGTGTCCTTCTCCGGCCGCGGCGGCGCCACCT
 
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JMSF003A17+               TGCGGCTCAGAAGCACCTGTTCGAGATTGGAGACCAAGCCGGGAGGTAGTAAGCTG
JMFF005I21+           GCCTTGCGGCTCAGAAGCACCTGTTCGAGATTGGAGACCAAGCCGGGAGGTAGTAAGCTG
JMSF032D12+           GCCTTGCGGCTCAGAAGCACCTGTTCGAGATTGGAGACCAAGCCGGGAGGTAGTAAGCTG
                      ____________________________________________________________
consensus             GCCTTGCGGCTCAGAAGCACCTGTTCGAGATTGGAGACCAAGCCGGGAGGTAGTAAGCTG
 
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JMSF003A17+           TTCTTCATTGCAGAGGTAGTCATTTCTAGAGAGAGAAAGTGGATATTCGGAGCACAGAAG
JMFF005I21+           TTCTTCATTGCAGAGGTAGTCATTTCTAGAGAGAGAAAGTGGATATTCGGAGCACAGAAG
JMSF032D12+           TTCTTCATTGCAGGGGTAGTCATTTCTAGAGAGAGAAAGTGGATATTCGGAGCACAGAAG
                      ____________________________________________________________
consensus             TTCTTCATTGCAGAGGTAGTCATTTCTAGAGAGAGAAAGTGGATATTCGGAGCACAGAAG
 
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JMSF003A17+           AGAGGAGAACGAAGGAGATAAGGAGGTAGTAGGTCAGGCGTTGAAGAATCAACCGAATTC
JMFF005I21+           AGAGGAGAACGAAGGAGATAAGGAGGTAGTAGGTCAGGCGTTGAAGAATCAACCGAATTC
JMSF032D12+           AGAGGAGAACGAAGGAGATAAGGAGGTAGTAGGTCAGGCGTTGAAGAATCAACCGAATTC
                      ____________________________________________________________
consensus             AGAGGAGAACGAAGGAGATAAGGAGGTAGTAGGTCAGGCGTTGAAGAATCAACCGAATTC
 
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JMSF003A17+           AAAACCCT                                                    
JMFF005I21+           AAAACCCTAGAGAGAGAAAGGAGTGATGAAAAAGGAGAGTAATAAAGCGCT         
JMSF032D12+           AAAACCCTAGAGAGAGAAAGGAGTGATGAAAAAGGAGAGTAATAAAGCGCTGAAAATGGA
                      ____________________________________________________________
consensus             AAAACCCTAGAGAGAGAAAGGAGTGATGAAAAAGGAGAGTAATAAAGCGCTGAAAATGGA
 
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JMSF032D12+           AGACAACCGGTTCAAACGGCGTCTAGCTGCAGAGTAGAGAGAGAAAGATTTTGTGCGCAT
                      ____________________________________________________________
consensus             AGACAACCGGTTCAAACGGCGTCTAGCTGCAGAGTAGAGAGAGAAAGATTTTGTGCGCAT
 
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JMSF032D12+           ATAGATATAGAGAGAGAAAGAGAGATAAGCGTGGAGAGGAGGAGAGAAGTGCGCGTGGTC
                      ____________________________________________________________
consensus             ATAGATATAGAGAGAGAAAGAGAGATAAGCGTGGAGAGGAGGAGAGAAGTGCGCGTGGTC