Contig 003744:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012F24Sequence570003744 (7)ref|XP_009788642.1|190PREDICTED: uncharacterized protein LOC104236423 [Nicotiana sylvestris]
JMFF015L16Sequence524003744 (7)ref|XP_009788642.1|151PREDICTED: uncharacterized protein LOC104236423 [Nicotiana sylvestris]
JMFF017F04Sequence544003744 (7)ref|XP_009788642.1|149PREDICTED: uncharacterized protein LOC104236423 [Nicotiana sylvestris]
JMFF039H19Sequence524003744 (7)ref|XP_009788642.1|151PREDICTED: uncharacterized protein LOC104236423 [Nicotiana sylvestris]
JMFN012E19Sequence426003744 (7)ref|XP_009593251.1|188PREDICTED: uncharacterized protein LOC104089939 [Nicotiana tomentosiformis]
JMFS132G02Sequence562003744 (7)ref|XP_009788642.1|203PREDICTED: uncharacterized protein LOC104236423 [Nicotiana sylvestris]
JMSF032A21Sequence685003744 (7)ref|XP_009788642.1|112PREDICTED: uncharacterized protein LOC104236423 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN012E19+                                   AACCTCCATTACCGCCGGGTGGGCACCGCCGGCGTA
                      ____________________________________________________________
consensus                                     AACCTCCATTACCGCCGGGTGGGCACCGCCGGCGTA
 
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JMFN012E19+           GTAGATCAAGAAATGTGACTTCTCGCCGAATAATCGGACATGGTAGGCTACCCATTCTCG
                      ____________________________________________________________
consensus             GTAGATCAAGAAATGTGACTTCTCGCCGAATAATCGGACATGGTAGGCTACCCATTCTCG
 
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JMFN012E19+           TATCCTCTGTGGACTCAAATCGCCGTAGATGGGCGATCCACAGTACAAGTAGTCGTATTT
                      ____________________________________________________________
consensus             TATCCTCTGTGGACTCAAATCGCCGTAGATGGGCGATCCACAGTACAAGTAGTCGTATTT
 
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JMFN012E19+           GGGCGGAGATTTGAACACAGAGCTAAAATTTTCGAAATCTCCGGGGGATTCGATTAATGC
                      ____________________________________________________________
consensus             GGGCGGAGATTTGAACACAGAGCTAAAATTTTCGAAATCTCCGGGGGATTCGATTAATGC
 
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JMFN012E19+           CTCGAATGTATCGGTGATGTTGAAGATGGAATCGCCTCCGCCGTTGGTGGCGGCGTGGAT
JMSF032A21+                                               TCCGCCGTTGGTGGCGGCGTGGAT
                      ____________________________________________________________
consensus             CTCGAATGTATCGGTGATGTTGAAGATGGAATCGCCTCCGCCGTTGGTGGCGGCGTGGAT
 
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JMFN012E19+           TAGGAGTTTGCCGCCGTGGTCGGCGTCGCCGACCGGAACAGGGAATGTGCAATTCACCAC
JMFF012F24+                                                             AATTCACCAC
JMFS132G02+                                            CGGAACAGGGAATGTGCAATTCACCAC
JMSF032A21+           TAGGAGTTTGCCGCCGTGGTCGGCGTCGCCGACCGGAACAGGGAATGTGCAATTCACCAC
                      ____________________________________________________________
consensus             TAGGAGTTTGCCGCCGTGGTCGGCGTCGCCGACCGGAACAGGGAATGTGCAATTCACCAC
 
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JMFN012E19+           CACCACCGTGTACACGCGGCCGTATCCCCAGTCTGGGAGGATTCTCTGGCCGGGGGTGAA
JMFF012F24+           CACCACCGTGTACACGCGGCCGTATCCCCAGTCTGGGAGGATTCTCTGGCCGGGGGTGAA
JMFS132G02+           CACCACCGTGTACACGCGGCCGTATCCCCAGTCTGGGAGGATTCTCTGGCCGGGGGTGAA
JMFF017F04+                                                                  GTGAA
JMSF032A21+           CACCACCGTGTACACGCGGCCGTATCCCCAGTCTGGGAGGATTCTCTGGCCGGGGGTGAA
                      ____________________________________________________________
consensus             CACCACCGTGTACACGCGGCCGTATCCCCAGTCTGGGAGGATTCTCTGGCCGGGGGTGAA
 
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JMFN012E19+           AACGGAATCTTCGGATTCACCCGCCGGGAC                              
JMFF012F24+           AACGGAATCTTCGGATTCACCCGCCGGGACCCACTCACACCGGTAACTCGGAGTTCCGAA
JMFS132G02+           AACGGAATCTTCGGATTCACCCGCCGGGACCCACTCACACCGGTAACTCGGAGTTCCGAA
JMFF039H19+                          TTCACCCGCCGGGACCCACTCACACCGGTAACTCGGAGTTCCGAA
JMFF015L16+                        GATTCACCCGCCGGGACCCACTCACACCGGTAACTCGGAGTTCCGAA
JMFF017F04+           AACGGAATCTTCGGATTCACCCGCCGGGACCCACTCACACCGGTAACTCGGAGTTCCGAA
JMSF032A21+           AACGGAATCTTCGGATTCACCCGCCGGGACCCACTCACACCGGTAACTCGGAGTTCCGAA
                      ____________________________________________________________
consensus             AACGGAATCTTCGGATTCACCCGCCGGGACCCACTCACACCGGTAACTCGGAGTTCCGAA
 
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JMFF012F24+           AACATGGAGAGGCTTTGAGGCTAAACCCATTACGGCAAACGTGTTGTAGCCGCCGCGGTA
JMFS132G02+           AACATGGAGAGGCTTTGAGGCTAAACCCATTACGGCAAACGTGTTGTAGCCGCCGCGGTA
JMFF039H19+           AACATGGAGAGGCTTTGAGGCTAAACCCATTACGGCAAACGTGTTGTAGCCGCCGCGGTA
JMFF015L16+           AACATGGAGAGGCTTTGAGGCTAAACCCATTACGGCAAACGTGTTGTAGCCGCCGCGGTA
JMFF017F04+           AACATGGAGAGGCTNTGAGGCTAAACCCATTACGGCAAACGTGTTGTAGCCGCCGCGGTA
JMSF032A21+           AACATGGAGAGGCTTTGAGGCT-AACCCATTACGGCAAACGTGTTGTAGCCGCCGCGGTA
                      ____________________________________________________________
consensus             AACATGGAGAGGCTTTGAGGCTAAACCCATTACGGCAAACGTGTTGTAGCCGCCGCGGTA
 
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JMFF012F24+           CGCCGACATGAGAATGAAGGTGTAGGCGGCGGAGCCAATGCCGGTGAAACCCCGTTTGAC
JMFS132G02+           CGCCGACATGAGAATGAAGGTGTAGGCGGCGGAGCCAATGCCGGTGAAACCCCGTTTGAC
JMFF039H19+           CGCCGACATGAGAATGAAGGTGTAGGCGGCGGAGCCAATGCCGGTGAAACCCCGTTTGAC
JMFF015L16+           CGCCGACATGAGAATGAAGGTGTAGGCGGCGGAGCCAATGCCGGTGAAACCCCGTTTGAC
JMFF017F04+           CNCCGACATGAGAATGAAGGTGTAGGCGGCGGAGCCAATGCCGGTGAAACCCCGTTTGAC
JMSF032A21+           CGCCGACATGAGAATGAAGGTGTAGGCGGCGGAGCCAATGCCGGTGAAACCCCGTTTGAC
                      ____________________________________________________________
consensus             CGCCGACATGAGAATGAAGGTGTAGGCGGCGGAGCCAATGCCGGTGAAACCCCGTTTGAC
 
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JMFF012F24+           GGCGCCGTTCCCCAGGGCTCTGTCCCGCTGCAGAGGCGTCGGAAGCGAGGCGGCATTCAA
JMFS132G02+           GGCGCCGTTCCCCAGGGCTCTGTCCCGCTGCAGAGGCGTCGGAAGCGAGGCGGCATTCAA
JMFF039H19+           GGCGCCGTTCCCCAGGGCTCTGTCCCGCTGCAGAGGCGTCGGAAGCGAGGCGGCATTCAA
JMFF015L16+           GGCGCCGTTCCCCAGGGCTCTGTCCCGCTGCAGAGGCGTCGGAAGCGAGGCGGCATTCAA
JMFF017F04+           GGCGCCGTTCCCCAGGGCTCTGTCCCGCTGCAGAGGCGTCGGAAGCGAGGCGGCATTCAA
JMSF032A21+           GGCGCCGTTCCCCAGGGCTCTGTCCCGCTGCAGAGGCGTCGGAAGCGAGGCGGCATTCAA
                      ____________________________________________________________
consensus             GGCGCCGTTCCCCAGGGCTCTGTCCCGCTGCAGAGGCGTCGGAAGCGAGGCGGCATTCAA
 
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JMFF012F24+           GACCGGTAAGTTAGTTTTCACGGCGGCGGGTTTGGAGAGGCAGTTGCGGAGATCGGCGGT
JMFS132G02+           GACCGGTAAGTTAGTTTTCACGGCGGCGGGTTTGGAGAGGCAGTTGCGGAGATCGGCGGT
JMFF039H19+           GACCGGTAAGTTAGTTTTCACGGCGGCGGGTTTGGAGAGGCAGTTGCGGAGATCGGCGGT
JMFF015L16+           GACCGGTAAGTTAGTTTTCACGGCGGCGGGTTTGGAGAGGCAGTTGCGGAGATCGGCGGT
JMFF017F04+           GACCGGTAAGTTAGTTTTCACGGCGGCGGGTTTGGAGAGGCAGTTGCGGAGATCGGCGGT
JMSF032A21+           GACCGGTAAGTTAGTTTTCACGGCGGCGGGTTTGGAGAGGCAGTTGCGGAGATCGGCGGT
                      ____________________________________________________________
consensus             GACCGGTAAGTTAGTTTTCACGGCGGCGGGTTTGGAGAGGCAGTTGCGGAGATCGGCGGT
 
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JMFF012F24+           GGAAAGAGAGAGCGGAGAAGGAATGAACTGAAGAACGGTGATGATGCAAAAGAGGAAGAG
JMFS132G02+           GGAAAGAGAGAGCGGAGAAGGAATGAACTGAAGAACGGTGATGATGCAAAAGAGGAAGAG
JMFF039H19+           GGAAAGAGAGAGCGGAGAAGGAATGAACTGAAGAACGGTGATGATGCAAAAGAGGAAGAG
JMFF015L16+           GGAAAGAGAGAGCGGAGAAGGAATGAACTGAAGAACGGTGATGATGCAAAAGAGGAAGAG
JMFF017F04+           GGAAAGAGAGAGCGGAGAAGGAATGAACTGAAGAACGGTGATGATGCAAAAGAGGAAGAG
JMSF032A21+           GGAAAGAGAGAGCGGAGAAGGAATGAACTGAAGAACGGTGATGATGCAAAAGAGGAAGAG
                      ____________________________________________________________
consensus             GGAAAGAGAGAGCGGAGAAGGAATGAACTGAAGAACGGTGATGATGCAAAAGAGGAAGAG
 
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JMFF012F24+           GAGAGCAGTGAGCAAAAGCTTCAACTCCGCCGCGCAGTTCCACACAACACCCACAAACAT
JMFS132G02+           GAGAGCAGTGAGCAAAAGCTTCAACTCCGCCGCGCAGTTCCACACAACACCCACAAACAT
JMFF039H19+           GAGAGCAGTGAGCAAAAGCTTCAACTCCGCCGCGCAGTTCCACACAACACCCACAAACAT
JMFF015L16+           GAGAGCAGTGAGCAAAAGCTTCAACTCCGCCGCGCAGTTCCACACAACACCCACAAACAT
JMFF017F04+           GAGAGCAGTGAGCAAAAGCTTCAACTCCGCCGCGCAGTTCCACACAACACCCACAAACAT
JMSF032A21+           GAGAGCAGTGAGCAAAAGCTTCAACTCCGCCGCGCAGTTCCACACAACACCCACAAACAT
                      ____________________________________________________________
consensus             GAGAGCAGTGAGCAAAAGCTTCAACTCCGCCGCGCAGTTCCACACAACACCCACAAACAT
 
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JMFF012F24+           CTTCCGGTCGCCGCCGCCGCCTTTCTGATCTTTCACCGTCATTCTTCTATTCTTCTTCCT
JMFS132G02+           CTTCCGGTCGCCGCCGCCGCCTTTCTGATCTTTCACCGTCATTCTTCTATTCTTC     
JMFF039H19+           CTTCCGGTCGCCGCCGCCGCCTTTCTGATCTTTCACCGTCATTCTTCTATTCTTCTTCCT
JMFF015L16+           CTTCCGGTCGCCGCCGCCGCCTTTCTGATCTTTCACCGTCATTCTTCTATTCTTCTTCCT
JMFF017F04+           CTTCCGGTCGCCGCCGCCGCCTTTCTGATCTTTCACCGTCATTCTTCTATTCTTCTTCCT
JMSF032A21+           CTTCCGGTCGCCGCCGCCGCCTTTCTGATCTTTCACCGTCATTCTTCTATTCTTCTTCCT
                      ____________________________________________________________
consensus             CTTCCGGTCGCCGCCGCCGCCTTTCTGATCTTTCACCGTCATTCTTCTATTCTTCTTCCT
 
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JMFF012F24+           CCTCCTCCTCCGCTTAACAC                                        
JMFF039H19+           CCTCCTCCTCCGCTTAACACAAAAGTTGAAGCTGACACACACAAACAAACAATGTGT   
JMFF015L16+           CCTCCTCCTCCGCTTAACACAAAAGTTGAAGCTGACACACACAAACAAACAATG      
JMFF017F04+           CCTCCTCCTCCGCTTAACACAAAAGTTGAAGCTGACACACACAAACAAACAATG      
JMSF032A21+           CCTCCTCCTCCGCTTAACACAAAAGTTGAAGCTGACACACACAAACAAACAATGTGTATC
                      ____________________________________________________________
consensus             CCTCCTCCTCCGCTTAACACAAAAGTTGAAGCTGACACACACAAACAAACAATGTGTATC