Contig 003742:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008G08Sequence591003742 (6)568003742 (6)ref|XP_009047111.1|4e-05hypothetical protein LOTGIDRAFT_111249 [Lottia gigantea] gb|ESP01953.1| hypothet
JMSF002I22Sequence363003742 (6)771003742 (6)
JMSF031L09Sequence673003742 (6)751003742 (6)

Alignment

This contig is upended


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rJMFF008G08-                                          TTGATTTAGTAACAAAGTGACACATAGT
                      ____________________________________________________________
consensus                                             TTGATTTAGTAACAAAGTGACACATAGT
 
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rJMFF008G08-          AAAAATGCACTGTACTTACCCTAAAACTTCTTTACCAACATCTCTTCACTGTACCAAGTA
rJMSF002I22-                                                                   GTA
                      ____________________________________________________________
consensus             AAAAATGCACTGTACTTACCCTAAAACTTCTTTACCAACATCTCTTCACTGTACCAAGTA
 
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rJMFF008G08-          TATCCCAAACCTACAAGGTTTGGAACCTAAAGCATTAAGAAGATAGTCCTTCACAGAAAA
rJMSF002I22-          TATCCCAAACCTACAAGGTTTGGAACCTAAAGCATTAAGAAGATAGTCCTTCACAGAAAA
rJMSF031L09-                          GGTTTGGAACCTAAAGCATTAAGAAGATAGTCCTTCACAGAAAA
                      ____________________________________________________________
consensus             TATCCCAAACCTACAAGGTTTGGAACCTAAAGCATTAAGAAGATAGTCCTTCACAGAAAA
 
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rJMFF008G08-          ACAACAAGAAATAACCAAAAAAGCACCCCAGCCAAATTGATCATGTTTTTAATTCGCTGC
rJMSF002I22-          ACAACAAGAAATAACCAAAAAAGCACCCCAGCCAAATTGATCATGTTTTTAATTCGCTGC
rJMSF031L09-          ACAACAAGAAATAACCAAAAAAGCACCCCAGCCAAATTGATCATGTTTTTAATTCGCTGC
                      ____________________________________________________________
consensus             ACAACAAGAAATAACCAAAAAAGCACCCCAGCCAAATTGATCATGTTTTTAATTCGCTGC
 
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rJMFF008G08-          TGAAGGGTCGAGGGCCGCTGCCGCTGCTGGAGGGTCAAGGCCACGGCCGCTGCTGGAAGG
rJMSF002I22-          TGAAGGGTCGAGGGCCGCTGCCGCTGCTGGAGGGTCAAGGCCACGGCCGCTGCTGGAAGG
rJMSF031L09-          TGAAGGGTCGAGGGCCGCTGCCGCTGCTGGAGGGTCAAGGCCACGGCCGCTGCTGGAAGG
                      ____________________________________________________________
consensus             TGAAGGGTCGAGGGCCGCTGCCGCTGCTGGAGGGTCAAGGCCACGGCCGCTGCTGGAAGG
 
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rJMFF008G08-          TCGAGGGCCACGGCCGCTGCTGGAAGGTCGAGGGCCACGGCCGCTGCTGGAAAGTCGAGG
rJMSF002I22-          TCGAGGGCCACGGCCGCTGCTGGAAGGTCGAGGGCCACGGCCGCTGCTGGAAAGTCGAGG
rJMSF031L09-          TCGAGGGCCACGGCCGCTGCTGGAAGGTCGAGGGCCACGGCCGCTGCTGGAAAGTCGAGG
                      ____________________________________________________________
consensus             TCGAGGGCCACGGCCGCTGCTGGAAGGTCGAGGGCCACGGCCGCTGCTGGAAAGTCGAGG
 
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rJMFF008G08-          GCCACGGCCGCTGCTGAAAGGTCGGAGGCCACGGCCGCTGCTGAAAATTTGAAGGAGTTG
rJMSF002I22-          GCCACGGCCGCTGCTGAAAGGTCGGAGGCCACGGCCGCTGCTGAAAATTTGAAGGAGTTG
rJMSF031L09-          GCCACGGCCGCTGCTGAAAGGTCGGAGGCCACGGCCGCTGCTGAAAATTTGAAGGAGTTG
                      ____________________________________________________________
consensus             GCCACGGCCGCTGCTGAAAGGTCGGAGGCCACGGCCGCTGCTGAAAATTTGAAGGAGTTG
 
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rJMFF008G08-          AGGGCTGCTGGAAGGTTTAGTGCGTCTTGGGCGACGCCCTCTGCTAGAAGGAGTAACGTA
rJMSF002I22-          AGGGCTGCTGGAAGGTTTAGTGCGTCTTGGGCGACGCCCTCTGCTAGAAGGAGTAACGTA
rJMSF031L09-          AGGGCTGCTGGAAGGTTTAGTGCGTCTTGGGCGACGCCCTCTGCTAGAAGGAGTAACGTA
JMSF031L09+                                                          AAGGAGTAACGTA
                      ____________________________________________________________
consensus             AGGGCTGCTGGAAGGTTTAGTGCGTCTTGGGCGACGCCCTCTGCTAGAAGGAGTAACGTA
 
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rJMFF008G08-          GACGCCCTCTGCTGGAAGAACGCCCTCTGCTGGAAGAACGCCCTCTGCTGGAAGAACGCC
rJMSF002I22-          GACGCCCTCTGCTGGAAGAACGCCCTCTGCTGGAAGAACGCCCTCTGCTGGAAGAACGCC
rJMSF031L09-          GACGCCCTCTGCTGGAAGAACGCCCTCTGCTGGAAGAACGCCCTCTGCTGGAAGAACGCC
JMSF031L09+           GACGCCCTCTGCTGGAAGAACGCCNTCTGCTGGAAGAACGCCCTCTGCTGGAAGAACGCC
                      ____________________________________________________________
consensus             GACGCCCTCTGCTGGAAGAACGCCCTCTGCTGGAAGAACGCCCTCTGCTGGAAGAACGCC
 
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rJMFF008G08-          CTCTGCTGGAAGAACGACGCTGCTGGAAGGATGACGCTGCTGGAAGGATGACGCTACTGG
rJMSF002I22-          CTCTGCTGGAAGAACGACGCTGCTGGAAGGATGACGCTGCTGGAAGGATGACGCTACTGG
rJMSF031L09-          CTCTGCTGGAAGAACGACGCTGCTGGAAGGATGACGCTGCTGGAAGGATGACGCTACTGG
JMFF008G08+                  GGAAGAACGACGCTGCTGGAAGGATGACGCTGCTGGAAGGATGACGCTACTGG
JMSF031L09+           CTCTGCTGGAAGAACGACGCTGCTGGAAGGATGACGCTGCTGGAAGGATGACGCTACTGG
                      ____________________________________________________________
consensus             CTCTGCTGGAAGAACGACGCTGCTGGAAGGATGACGCTGCTGGAAGGATGACGCTACTGG
 
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rJMSF002I22-          AAGGACGCCAACTTCTGCGAATATTTGGGACATAGCATCTCTCAAGGAGGCGAGAGATCC
rJMSF031L09-          AAGGACGCCAACTTCTGCGAATATTTGGGACATAGCATCTCTCAAGGAGGCGAGAGATCC
JMFF008G08+           AAGGACGCCAACTTCTGCGAATATTTGGGACATAGCATCTCTCAAGGAGGCGAGAGATCC
JMSF031L09+           AAGGACGCCAACTTCTGCGAATATTTGGGACATAGCATCTCTCAAGGAGGCGAGAGATCC
                      ____________________________________________________________
consensus             AAGGACGCCAACTTCTGCGAATATTTGGGACATAGCATCTCTCAAGGAGGCGAGAGATCC
 
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rJMSF002I22-          AAACAAAATACCAACCTCGGCCTCAAGCTTTTCAAGCTCGAAGTAGAGTTCTACCAAGTA
rJMSF031L09-          AAACAAAATACCAACCTCGGCCTCAAGCTTTTCAAGCTCGAAGTAGAGTTCTACCAAGTA
JMFF008G08+           AAACAAAATACCAACCTCGGCCTCAAGCTTTTCAAGCTCGAAGTAGAGTTCTACCAAGTA
JMSF031L09+           AAACAAAATACCAACCTCGGCCTCAAGCTTTTCAAGCTCGAAGTAGAGTTCTACCAAGTA
                      ____________________________________________________________
consensus             AAACAAAATACCAACCTCGGCCTCAAGCTTTTCAAGCTCGAAGTAGAGTTCTACCAAGTA
 
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rJMSF002I22-          CCTATCTTTCTTAACATACAATTCCCTTAAGTGCCGGAGTTTACTCCTAATTTCTGTCTC
rJMSF031L09-          CCTATCTTTCTTAACATACAATTCCCTTAAGTGCCGGAGTTTACTCCTAATTTCTGTCTC
JMFF008G08+           CCTATCTTTCTTAACATACAATTCCCTTAAGTGCCGGAGTTTACTCCTAATTTCTGTCTC
JMSF002I22+                                                                   TCTC
JMSF031L09+           CCTATCTTTCTTAACATACAATTCCCTTAAGTGCCGGAGTTTACTCCTAATTTCTGTCTC
                      ____________________________________________________________
consensus             CCTATCTTTCTTAACATACAATTCCCTTAAGTGCCGGAGTTTACTCCTAATTTCTGTCTC
 
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rJMSF002I22-          AGTAGCCTCAGTAGATAGAAAACCAACATGCTCAGTANGTTGAAACTTCTGTATCTGAAA
rJMSF031L09-          AGTAGCCTCAGTAGATAGAAAACCAACATGCTCAGTAGGTTGAAACTTCTGTATCTGAAA
JMFF008G08+           AGTAGCCTCAGTAGATAGAAAACCAACATGCTCAGTAGGTTGAAACTTCTGTATCTGAAA
JMSF002I22+           AGTAGCCTCAGTAGATAGAAAACCAACATGCTCAGTAGGTTGAAACTTCTGTATCTGAAA
JMSF031L09+           AGTAGCCTCAGTAGATAGAAAACCAACATGCTCAGTAGGTTGAAACTTCTGTATCTGAAA
                      ____________________________________________________________
consensus             AGTAGCCTCAGTAGATAGAAAACCAACATGCTCAGTAGGTTGAAACTTCTGTATCTGAAA
 
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rJMSF002I22-          CTTATTTGAAATTTCATTGCATTTCG                                  
rJMSF031L09-          CTTATTTGAAATTTCATTGCATTTCGTA                                
JMFF008G08+           CTTATTTGAAATTTCATTGCATTTCGTAGTGATCTTTGCCTCCTTATAAATTTGTCTCAG
JMSF002I22+           CTTATTTGAAATTTCATTGCATTTCGTAGTGATCTTTGCCTCCTTATAAATTTGTCTCAG
JMSF031L09+           CTTATTTGAAATTTCATTGCATTTCGTAGTGATCTTTGCCTCCTTATAAATTTGTCTCAG
                      ____________________________________________________________
consensus             CTTATTTGAAATTTCATTGCATTTCGTAGTGATCTTTGCCTCCTTATAAATTTGTCTCAG
 
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JMFF008G08+           GGACTTCATAGCATTAGCAATGACACTAATTGCCTCCCTCAAATCTTGTTTGCTTGCTAA
JMSF002I22+           GGACTTCATAGCATTAGCAATGACACTAATTGCCTCCCTCAAATCTTGTTTGCTTGCTAA
JMSF031L09+           GGACTTCATAGCATTAGCAATGACACTAATTGCCTCCCTCAAATCTTGTTTGCTTGCTAA
                      ____________________________________________________________
consensus             GGACTTCATAGCATTAGCAATGACACTAATTGCCTCCCTCAAATCTTGTTTGCTTGCTAA
 
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JMFF008G08+           TTGCTTGGCAATCATCTCATCTTTCAGCCTAATGGCAGACATATGTAATTCCTGCATCTG
JMSF002I22+           TTGCTTGGCAATCATCTCATCTTTCAGCCTAATGGCAGACATATGTAATTCCTGCATCTG
JMSF031L09+           TTGCTTGGCAATCATCTCATCTTTCAGCCTAATGGCAGACATATGTAATTCCTGCATCTG
                      ____________________________________________________________
consensus             TTGCTTGGCAATCATCTCATCTTTCAGCCTAATGGCAGACATATGTAATTCCTGCATCTG
 
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JMFF008G08+           CTCTAAGTCTGCCATTATCCGGCGGTGAACAAAGAGGCCGGGGCCAAAAACGTCGCCGCG
JMSF002I22+           CTCTAAGTCTGCCATTATCCGGCGGTGAACAAAGAGGCCGGGGCCAAAAACGTCGCCGCG
JMSF031L09+           CTCTAAGTCTGCCATTATCCGGCGGTGAACAAAGAGGCCGGGGCCAAAAACGTCGCCGCG
                      ____________________________________________________________
consensus             CTCTAAGTCTGCCATTATCCGGCGGTGAACAAAGAGGCCGGGGCCAAAAACGTCGCCGCG
 
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JMFF008G08+           TCAAATGCACGTCGCTGCGTCCTGCGTCAAATGCCAAAACGTGCTGCGTCAAATGCC   
JMSF002I22+           TCAAATGCACGTCGCTGCGTCCTGCGTCAAATGCCAAAACGTGCTGCGTCAAATGCC   
JMSF031L09+           TCAAATGCACGTCGCTGCGTCCTGCGTCAAATGCCAAAACGTGCTGCGTCAAATGCCCCT
                      ____________________________________________________________
consensus             TCAAATGCACGTCGCTGCGTCCTGCGTCAAATGCCAAAACGTGCTGCGTCAAATGCCCCT