Contig 003737:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF031C19-                                                  CAACCCTATTCGAGTTGATT
                      ____________________________________________________________
consensus                                                     CAACCCTATTCGAGTTGATT
 
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rJMSF031C19-          GTACACTTGACATGGTAATTAATAATAATAATGATTACAAAATATAAAATGTACTCAAAT
                      ____________________________________________________________
consensus             GTACACTTGACATGGTAATTAATAATAATAATGATTACAAAATATAAAATGTACTCAAAT
 
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rJMSF031C19-          GTTTTTAATCGGAGGCGGTGAGAACCATACACGCATACAGTACTACTGCAGACAGAAAAC
rJMSF032K17-            TTTTTATCGGAGGCGGTGAGAACCATACACGCATACAGTACTACTGCAGACAGAAAAC
                      ____________________________________________________________
consensus             GTTTTTTATCGGAGGCGGTGAGAACCATACACGCATACAGTACTACTGCAGACAGAAAAC
 
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rJMSF031C19-          GATATATAAATCTATATAGCAATTGAAGCAACAGAAATCTGGGAATAATAGATTAATAGT
rJMSF032K17-          GATATATAAATCTATATAGCAATTGAAGCAACAGAAATCTGGGAATAATAGATTAATAGT
                      ____________________________________________________________
consensus             GATATATAAATCTATATAGCAATTGAAGCAACAGAAATCTGGGAATAATAGATTAATAGT
 
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rJMSF031C19-          AATGATTTATTAATAATATATAGCTCTACGGCCCAATATAATTAATGTGCACTTGTAAGG
rJMSF032K17-          AATGATTTATTAATAATATATAGCTCTACGGCCCAATATAATTAATGTGCACTTGTAAGG
                      ____________________________________________________________
consensus             AATGATTTATTAATAATATATAGCTCTACGGCCCAATATAATTAATGTGCACTTGTAAGG
 
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rJMSF031C19-          AGACCGGCCGGGAATGCATGCACATACAGGCGGTTAGTCGTCGGAATCCATGGCGATAAT
rJMSF032K17-          AGACCGGCCGGGAATGCATGCACATACAGGCGGTTAGTCGTCGGAATCCATGGCGATAAT
JMSF032K17+                                                            ATGGCGATAAT
                      ____________________________________________________________
consensus             AGACCGGCCGGGAATGCATGCACATACAGGCGGTTAGTCGTCGGAATCCATGGCGATAAT
 
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rJMSF031C19-          GGTGCTCAAGTTCATCGGCACCATGTACTTATCAGTTCCGGTCAAAATGGAGCGGACGAT
rJMSF032K17-          GGTGCTCAAGTTCATCGGCACCATGTACTTATCAGTTCCGGTCAAAATGGAGCGGACGAT
JMSF032K17+           GGTGCTCAAGTTCATCGGCACCATGTACTTATCAGTTCCGGTCAAAATGGAGCGGACGAT
                      ____________________________________________________________
consensus             GGTGCTCAAGTTCATCGGCACCATGTACTTATCAGTTCCGGTCAAAATGGAGCGGACGAT
 
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rJMSF031C19-          GATGCTATTCGCCCTCTGAGATGGATGGAAGGCATCCCAAAACGCATATTCATCTCTGTT
rJMSF032K17-          GATGCTATTCGCCCTCTGAGATGGATGGAAGGCATCCCAAAACGCATATTCATCTCTGTT
JMSF032K17+           GATGCTATTCGCCCTCTGAGATGGATGGAAGGCATCCCAAAACGCATATTCATCTCTGTT
                      ____________________________________________________________
consensus             GATGCTATTCGCCCTCTGAGATGGATGGAAGGCATCCCAAAACGCATATTCATCTCTGTT
 
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rJMSF031C19-          TGAGCAAATGTTAGACATTGGTGTGCAAAGTCCGATCCCGTTGTACGGTCCTTGTCCGCA
rJMSF032K17-          TGAGCAAATGTTAGACATTGGTGTGCAAAGTCCGATCCCGTTGTATGGTCCTTGTCCGCA
JMSF032K17+           TGAGCAAATGTTAGACATTGGTGTGCAAAGTCCGATCCCGTTGTATGGTCCTTGTCCGCA
                      ____________________________________________________________
consensus             TGAGCAAATGTTAGACATTGGTGTGCAAAGTCCGATCCCGTTGTATGGTCCTTGTCCGCA
 
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rJMSF031C19-          ACACGCCACCTTCGACGTGACAAACCCGTATGCCTGCGGATTGTTGATGAAATCGTTATG
rJMSF032K17-          ACACGCCACCTTCGACGTGACAAACCCGTATGCCTGCGGATTGTTGATGAAATCGTTATG
JMSF032K17+           ACACGCCACCTTCGACGTGACAAACCCGTATGCCTGCGGATTGTTGATGAAATCGTTATG
                      ____________________________________________________________
consensus             ACACGCCACCTTCGACGTGACAAACCCGTATGCCTGCGGATTGTTGATGAAATCGTTATG
 
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rJMSF031C19-          CATTTGCTGCGCATTGACGGCGACGAAGACGGTGGAGCCCAGCTCCTGGTTGAGATCCTG
rJMSF032K17-          CATTTGCTGCGCATTGACGGCGACGAAGACGGTGGAGCCCAGCTCCTGGTTGAGATCCTG
JMSF032K17+           CATTTGCTGCGCATTGACGGCGACGAAGACGGTGGAGCCCAGCTCCTGGTTGAGATCCTG
                      ____________________________________________________________
consensus             CATTTGCTGCGCATTGACGGCGACGAAGACGGTGGAGCCCAGCTCCTGGTTGAGATCCTG
 
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rJMSF031C19-          AATCATTTGGATGAGAAGCGGATTGAATATTCCGGAGGCGCGTTGCAGCTCCGGCGCACA
rJMSF032K17-          AATCATTTGGATGAGAAGCGGATTGAATATTCCGGAGGCGCGTTGCAGCTCCGGCGCACA
JMSF032K17+           AATCATTTGGATGAGAAGCGGATTGAATATTCCGGAGGCGCGTTGCAGCTCCGGCGCACA
                      ____________________________________________________________
consensus             AATCATTTGGATGAGAAGCGGATTGAATATTCCGGAGGCGCGTTGCAGCTCCGGCGCACA
 
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rJMSF031C19-          TTGCCCGTTTCTTCCCCGTTGAGCTAACTCAGACGGANCGCACCCTAACGG         
rJMSF032K17-          TTGCCCGTTTCTTCCCCGTTGAGCTAACTCAGACGGAACGCACCCTAACGGCCCCGTCCC
JMSF032K17+           TTGCCCGTTTCTTCCCCGTTGAGCTAACTCAGACGGAACGCACCCTAACGGCCCCGTCCC
                      ____________________________________________________________
consensus             TTGCCCGTTTCTTCCCCGTTGAGCTAACTCAGACGGAACGCACCCTAACGGCCCCGTCCC
 
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rJMSF032K17-          TGTCACCAACACTCTTCGAGCTCCCATCTCATACAGCCTCGTCAAGA             
JMSF032K17+           TGTCACCAACACTCTTCGAGCTCCCATCTCATACAGCCTCGTCAAGATCTTGCGGTATTC
                      ____________________________________________________________
consensus             TGTCACCAACACTCTTCGAGCTCCCATCTCATACAGCCTCGTCAAGATCTTGCGGTATTC
 
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JMSF032K17+           GGAGATGAGGAAGCGGGCGTAATCGGGGATGTTGTATTGGAGGCTTCTGGCACTGACGGG
JMFN011K07+                             GTAATCGGGGATGTTGTATTGGAGGCTTCTGGCACTGACGGG
JMSF031C19+                                                        TCTGGCACTGACGGG
                      ____________________________________________________________
consensus             GGAGATGAGGAAGCGGGCGTAATCGGGGATGTTGTATTGGAGGCTTCTGGCACTGACGGG
 
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JMSF032K17+           CACCAGGAAGTAGTTGTTGACGAAATCGTTACCGCCAAGGGTGATGAGGACGAGGGCTTT
JMFN011K07+           CACCAGGAAGAAGTTGTTGACGAAATCGTTACCGCCAAGGGTGATGAGGACGAGGGCTTT
JMSF031C19+           CACCAGGAAGTAGTTGTTGACGAAATCGTTACCGCCAAGGGTGATGAGGACGAGGGCTTT
                      ____________________________________________________________
consensus             CACCAGGAAGTAGTTGTTGACGAAATCGTTACCGCCAAGGGTGATGAGGACGAGGGCTTT
 
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JMSF032K17+           GTTCACGAGATTCTGCGTCTGTTGTTCGCCTATCAGGGCGCTCACCCGCTGCTGGTACTG
JMFN011K07+           GTTCACGAGATTCTGCGTCTGTTGTTCGCCTATCAGGGCGCTCACCCGCTGCTGGTACTG
JMSF031C19+           GTTCACGAGATTCTGCGTCTGTTGTTCGCCTATCAGGGCGCTCACCCGCTGCTGGTACTG
                      ____________________________________________________________
consensus             GTTCACGAGATTCTGCGTCTGTTGTTCGCCTATCAGGGCGCTCACCCGCTGCTGGTACTG
 
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JMSF032K17+           CTGGAAATTCTGCAACTGTTGGCTTATCCT                              
JMFN011K07+           CTGGAAATTCTGCAACTGTTGGCTTATCCTTATAATGTTTATAAACTGAACGCCAGTGTC
JMSF031C19+           CTGGAAATTCTGCAACTGTTGGCTTATCCTTATAATGTTTATAAACTGAACGCCAGTGTC
                      ____________________________________________________________
consensus             CTGGAAATTCTGCAACTGTTGGCTTATCCTTATAATGTTTATAAACTGAACGCCAGTGTC
 
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JMFN011K07+           GTTGAGAATCCCGATTCCAGCAGAGGCGAAATTTGCACCGACCAACAACTTTTTACCGTT
JMSF031C19+           GTTGAGAATCCCGATTCCAGCAGAGGCGAAATTTGCACCGACCAACAACTTTTTACCGTT
                      ____________________________________________________________
consensus             GTTGAGAATCCCGATTCCAGCAGAGGCGAAATTTGCACCGACCAACAACTTTTTACCGTT
 
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JMFN011K07+           AAGCTCCGGGTCCAAGTAAGGCAACGTTGACTCCGAACCAATAGCTTGGCTGATAAAGTC
JMSF031C19+           AAGCTCCGGGTCCAAGTAAGGCAACGTTGACTCCGAACCAATAGCTTGGCTGATAAAGTC
                      ____________________________________________________________
consensus             AAGCTCCGGGTCCAAGTAAGGCAACGTTGACTCCGAACCAATAGCTTGGCTGATAAAGTC
 
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JMFN011K07+           AGGGATGTTGTAGCCATTGGAGAAGCGGCCGGTGGGGCGGTGAGTGGGGTAGTCAACGCC
JMSF031C19+           AGGGATGTTGTAGCCATTGGAGAAGCGGCCGGTGGGGCGGTGAGTGGGGTAGTCAACGCC
                      ____________________________________________________________
consensus             AGGGATGTTGTAGCCATTGGAGAAGCGGCCGGTGGGGCGGTGAGTGGGGTAGTCAACGCC
 
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JMFN011K07+           GTAGGGCGGGGAGTCGGCCCGGGCGGAGGTGGCGAGGTAGTTGTTGTTGCCATTGTCGAC
JMSF031C19+           GTAGGGCGGGGAGTCGGCCCGGGCGGAGGTGGCGAGGTAGTTGTTGTTGCCATTGTCGAC
                      ____________________________________________________________
consensus             GTAGGGCGGGGAGTCGGCCCGGGCGGAGGTGGCGAGGTAGTTGTTGTTGCCATTGTCGAC
 
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JMFN011K07+           CAGCGAGTCGCCGAACACGAAGAA                                    
JMSF031C19+           CAGCGAGTCGCCGAACACGAAGAAGGCACGCGCCGCCTCCGCAGGAGGCGCAAAGAATGC
                      ____________________________________________________________
consensus             CAGCGAGTCGCCGAACACGAAGAAGGCACGCGCCGCCTCCGCAGGAGGCGCAAAGAATGC
 
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JMSF031C19+           GGCCACCGCAACCACGGCGGCGGCTAAGAGAACACTAAAACCAACTCGACGACCAGACAT
                      ____________________________________________________________
consensus             GGCCACCGCAACCACGGCGGCGGCTAAGAGAACACTAAAACCAACTCGACGACCAGACAT
 
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JMSF031C19+           TATTGTAGTTTATGTGATGAGAAAGTTACGCAAGTAGCTTTCTGCGGGGTTGTGAATGTC
                      ____________________________________________________________
consensus             TATTGTAGTTTATGTGATGAGAAAGTTACGCAAGTAGCTTTCTGCGGGGTTGTGAATGTC