Contig 003732:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015D16Sequence510003732 (2)752013923 (3)ref|XP_002529368.1|7e-107serine-threonine kinase receptor-associated protein, putative [Ricinus communis
JMSF030L11Sequence625003732 (2)ref|XP_010688097.1|1e-11PREDICTED: serine-threonine kinase receptor-associated protein-like [Beta vulga751013923 (3)ref|XP_002529368.1|7e-107serine-threonine kinase receptor-associated protein, putative [Ricinus communis

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF030L11+                                             CTTTGCTGGCACTGATGAGGAAAAAT
                      ____________________________________________________________
consensus                                               CTTTGCTGGCACTGATGAGGAAAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF030L11+           CCNTCAGGAGTGATGGGGCTGTAGAACAAATCAACAACCGGCCGGGAATGCCCGTGGCAA
                      ____________________________________________________________
consensus             CCNTCAGGAGTGATGGGGCTGTAGAACAAATCAACAACCGGCCGGGAATGCCCGTGGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF015D16+                                      ATCAANCAATATTCCTAATTGCCCCCAGAATAT
JMSF030L11+           ACAAGCGGAGCGGCAACCTTNTTATCCATCAAACAATATTCCTAATTGCCCCCAGAATAT
                      ____________________________________________________________
consensus             ACAAGCGGAGCGGCAACCTTNTTATCCATCAAACAATATTCCTAATTGCCCCCAGAATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF015D16+           AAATATGCT-AAAAAAAAATACTTTCTTTCCTCTTT--ATCAAATATGCTATAAATAAGA
JMSF030L11+           AAATATGCTAAAAAAAAAATACTTTCTTTCCTCTTTCGATCAAATATGCTATAAATAAGA
                      ____________________________________________________________
consensus             AAATATGCTAAAAAAAAAATACTTTCTTTCCTCTTTCGATCAAATATGCTATAAATAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF015D16+           TACTAGCAAAATCAAAATCAACGCGGCCAAGTCCCAGATCCGAATTTCATAAAACAAGGA
JMSF030L11+           TACTAGCAAAATCAAAATCAACGCGGCCAAGTCCCAGATCCGAATTTCATAAAACAAGGA
                      ____________________________________________________________
consensus             TACTAGCAAAATCAAAATCAACGCGGCCAAGTCCCAGATCCGAATTTCATAAAACAAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF015D16+           ACGGCAAAAACAGCACCAACTGACAATTGAACAAAAAATACGCACAATTGCCTGCACAAA
JMSF030L11+           ACGGCAAAAACAGCACCAACTGACAATTGAACAAAAAATACGCACAATTGCCTGCACAAA
                      ____________________________________________________________
consensus             ACGGCAAAAACAGCACCAACTGACAATTGAACAAAAAATACGCACAATTGCCTGCACAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF015D16+           ATCCAAACTTTATATGCTGATTTTTGTTCTTTGATGTGTTTATCCACTGTATAGAAGAAA
JMSF030L11+           ATCCAAACTTTATATGCTGATTTTTGTTCTTTGATGTGTTTATCCACTGTATAGAAGAAA
                      ____________________________________________________________
consensus             ATCCAAACTTTATATGCTGATTTTTGTTCTTTGATGTGTTTATCCACTGTATAGAAGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF015D16+           ATTGCAAATTAAAATGTAAAATTTTCTACAGATCAGATATAGATAAGGAAATGGATATGT
JMSF030L11+           ATTGCAAATTAAAATGTAAAATTTTCTACAGATCAGATATAGATAAGGAAATGGATATGT
                      ____________________________________________________________
consensus             ATTGCAAATTAAAATGTAAAATTTTCTACAGATCAGATATAGATAAGGAAATGGATATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF015D16+           GTATTAGGGAGATTGGCGCGACAATCAACAAGGTGGGAAACCCTAAATTGGGATTCGATC
JMSF030L11+           GTATTAGGGAGATTGGCGCGACAATCAACAAGGTGGGAAACCCTAAATTGGGATTCGATC
                      ____________________________________________________________
consensus             GTATTAGGGAGATTGGCGCGACAATCAACAAGGTGGGAAACCCTAAATTGGGATTCGATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF015D16+           GGTTTGAGTTCTGAGTGAATTCACACCTCCAACCCTAGAAGATTGATAGATCAGAGAGAA
JMSF030L11+           GGTTTGAGTTCTGAGTGAATTCACACCTCCAACCCTAGAAGATTGATAGATCAGAGAGAA
                      ____________________________________________________________
consensus             GGTTTGAGTTCTGAGTGAATTCACACCTCCAACCCTAGAAGATTGATAGATCAGAGAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF015D16+           AAAAACAAAAGAAAAAAAATATAGTAATATACAACTACACTACAGGGCTGGCTGGG    
JMSF030L11+           AAAAACAAAAG-AAAAAAATATAGTAATATACAACTACACTACAGGGCTGGCTGGGCGCC
                      ____________________________________________________________
consensus             AAAAACAAAAGAAAAAAAATATAGTAATATACAACTACACTACAGGGCTGGCTGGGCGCC