| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS035F02 | Sequence | 480 | 003730 (5) | ref|XP_009802424.1| | 6e-54 | PREDICTED: ABC transporter G family member 14-like [Nicotiana sylvestris] | |||||
| JMSF014A22 | Sequence | 472 | 003730 (5) | ref|XP_009802424.1| | 3e-38 | PREDICTED: ABC transporter G family member 14-like [Nicotiana sylvestris] | 755 | 002800 (5) | emb|CDP07185.1| | 1e-98 | unnamed protein product [Coffea canephora] |
| JMSF026D18 | Sequence | 656 | 003730 (5) | ref|XP_009802424.1| | 5e-78 | PREDICTED: ABC transporter G family member 14-like [Nicotiana sylvestris] | 634 | 002800 (5) | emb|CDP07185.1| | 7e-72 | unnamed protein product [Coffea canephora] |
| JMSF030H13 | Sequence | 661 | 003730 (5) | ref|XP_009802424.1| | 4e-77 | PREDICTED: ABC transporter G family member 14-like [Nicotiana sylvestris] | 647 | 002800 (5) | emb|CDP07185.1| | 8e-83 | unnamed protein product [Coffea canephora] |
| JMSF048H02 | Sequence | 656 | 003730 (5) | ref|XP_009802424.1| | 6e-77 | PREDICTED: ABC transporter G family member 14-like [Nicotiana sylvestris] | 725 | 002800 (5) | emb|CDP07185.1| | 8e-101 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF030H13+ C
____________________________________________________________
consensus C
. : . : . : . : . : . :
JMSF026D18+ CCCGGGTTAGGCTCTGGGGCAGCCTCAGCAGCGCTGTGAAGAGAAGCGTTTCTTTC
JMSF048H02+ CCCGGGTTAGGCTCTGGGGCAGCNTCAGCAGCGCTGTGAAGAGAAGCGTTTCTTTC
JMSF030H13+ TCCTCCCGGGTTAGGCTCTGGGGCAGCNTCAGCAGCGCTGTGAAGAGAAGCGTTTCTTTC
____________________________________________________________
consensus TCCTCCCGGGTTAGGCTCTGGGGCAGCCTCAGCAGCGCTGTGAAGAGAAGCGTTTCTTTC
. : . : . : . : . : . :
JMSF026D18+ ACTGTCAGATGCGGGTATAGGACATCATCTTGCGCCACGAATCCAGTTAGGCGTTTGATG
JMFS035F02+ GATG
JMSF048H02+ ACTGTCAGATGCGGGTATAGGACATCATCTTGCGCCACGAATCCAGTTAGGCGTTTGATG
JMSF030H13+ ACTGTCAGATGCGGGTATAGGACATCATCTTGCGCCACGAATCCAGTTAGGCGTTTGATG
____________________________________________________________
consensus ACTGTCAGATGCGGGTATAGGACATCATCTTGCGCCACGAATCCAGTTAGGCGTTTGATG
. : . : . : . : . : . :
JMSF026D18+ GAGCCAGAAAACGGCTGGCTGTTGTAGGTGACCTTCCCCGATAGTTTGCCATAGAGACGC
JMFS035F02+ GAGCCAGAAAACGGCTGGCTGTTGTAGGTGACCTTCCCCGATAGTTTGCCATAGAGACGC
JMSF048H02+ GAGCCAGAAAACGGCTGGCTGTTGTAGGTGACCTTCCCCGATAGTTTGCCATAGAGACGC
JMSF030H13+ GAGCCAGAAAACGGCTGGCTGTTGTAGGTGACCTTCCCCGATAGTTTGCCATAGAGACGC
____________________________________________________________
consensus GAGCCAGAAAACGGCTGGCTGTTGTAGGTGACCTTCCCCGATAGTTTGCCATAGAGACGC
. : . : . : . : . : . :
JMSF026D18+ CCTCCTAGGGCCGTTAGCAGGGTGGTTTTCCCACTCCCCGATGGACCTAGCATGGCTAGT
JMFS035F02+ CCTCCTAGGGCCGTTAGCAGGGTGGTTTTCCCACTCCCCGATGGACCTAGCATGGCTAGT
JMSF014A22+ GGCCGTTAGCAGGGTGGTTTTCCCACTCCCCGATGGACCTAGCATGGCTAGT
JMSF048H02+ CCTCCTAGGGCCGTTAGCAGGGTGGTTTTCCCACTCCCCGATGGACCTAGCATGGCTAGT
JMSF030H13+ CCTCCTAGGGCCGTTAGCAGGGTGGTTTTCCCACTCCCCGATGGACCTAGCATGGCTAGT
____________________________________________________________
consensus CCTCCTAGGGCCGTTAGCAGGGTGGTTTTCCCACTCCCCGATGGACCTAGCATGGCTAGT
. : . : . : . : . : . :
JMSF026D18+ ATCTCGCCCGGACACACCATGCCCGTCACTCCATTCAGAATCGTCTTCTCTCTGGCACTC
JMFS035F02+ ATCTCGCCCGGACACACCATGCCCGTCACTCCATTCAGAATCGTCTTCTCTCTGGCACTC
JMSF014A22+ ATCTCGCCCGGACACACCATGCCCGTCACTCCATTCAGAATCGTCTTCTCTCTGGCACTC
JMSF048H02+ ATCTCGCCCGGACACACCATGCCCGTCACTCCATTCAGAATCGTCTTCTCTCTGGCACTC
JMSF030H13+ ATCTCGCCCGGACACACCATGCCCGTCACTCCATTCAGAATCGTCTTCTCTCTGGCACTC
____________________________________________________________
consensus ATCTCGCCCGGACACACCATGCCCGTCACTCCATTCAGAATCGTCTTCTCTCTGGCACTC
. : . : . : . : . : . :
JMSF026D18+ GATTTCCCCGTGCAGCATGATCCCTTGTCTTCCCCTCCAACCTTGTACACAATCTCTTCA
JMFS035F02+ GATTTCCCCGTGCAGCATGATCCCTTGTCTTCCCCTCCAACCTTGTACACAATCTCTTCA
JMSF014A22+ GATTTCCCCGTGCAGCATGATCCCTTGTCTTCCCCTCCAACCTTGTACACAATCTCTTCA
JMSF048H02+ GATTTCCCCGTGCAGCATGATCCCTTGTCTTCCCCTCCAACCTTGTACACAATCTCTTCA
JMSF030H13+ GATTTCCCCGTGCAGCATGATCCCTTGTCTTCCCCTCCAACCTTGTACACAATCTCTTCA
____________________________________________________________
consensus GATTTCCCCGTGCAGCATGATCCCTTGTCTTCCCCTCCAACCTTGTACACAATCTCTTCA
. : . : . : . : . : . :
JMSF026D18+ AACTTCAAGACTATGGGATACAAGGCTCTTTGAAGGAAGGACTGTGTATTGGTCTGCAAA
JMFS035F02+ AACTTCAAGACTATGGGATACAAGGCTCTTTGAAGGAAGGACTGTGTATTGGTCTGCAAA
JMSF014A22+ AACTTCAAGACTATGGGATACAAGGCTCTTTGAAGGAAGGACTGTGTATTGGTCTGCAAA
JMSF048H02+ AACTTCAAGACTATGGGATACAAGGCTCTTTGAAGGAAGGACTGTGTATTGGTCTGCAAA
JMSF030H13+ AACTTAAAGACTATGGGATACAAGGCTCTTTGAAGGAAGGACTGTGTATTGGTCTGCAAA
____________________________________________________________
consensus AACTTCAAGACTATGGGATACAAGGCTCTTTGAAGGAAGGACTGTGTATTGGTCTGCAAA
. : . : . : . : . : . :
JMSF026D18+ GGGTAAGCCAGGCAGGGCTTGTCAGGTGCAGCATCTGCAGGCTGGTTCGTCGTGGCTGCA
JMFS035F02+ GGGTAAGCCAGGCAGGGCTTGTCAGGTGCAGCATCTGCAGGCTGGTTCGTCGTGGCTGCA
JMSF014A22+ GGGTAAGCCAGGCAGGGCTTGTCAGGTGCAGCATCTGCAGGCTGGTTCGTCGTGGCTGCA
JMSF048H02+ GGGTAAGCCAGGCAGGGCTTGTCAGGTGCAGCATCTGCAGGCTGGTTCGTCGTGGCTGCA
JMSF030H13+ GGGTAAGCCAGGCAGGGCTTGTCAGGTGCAGCATCTGCAGGCTGGTTCGTCGTGGCTGCA
____________________________________________________________
consensus GGGTAAGCCAGGCAGGGCTTGTCAGGTGCAGCATCTGCAGGCTGGTTCGTCGTGGCTGCA
. : . : . : . : . : . :
JMSF026D18+ TCATCCATCCTCTGATCGGGACTACAATTCTCGGGCTTTGGCGCTACAGAGTGAAGGGCG
JMFS035F02+ TCATCCATCCTCTGATCGGGACTACAATTCTCGGGCTTTGGCGCTACAGAGTGAAGGGCG
JMSF014A22+ TCATCCATCCTCTGATCGGGACTACAATTCTCGGGCTTTGGCGCTACAGAGTGAAGGGCG
JMSF048H02+ TCATCCATCCTCTGATCGGGACTACAATTCTCGGGCTTTGGCGCTACAGAGTGAAGGGCG
JMSF030H13+ TCATCCATCCTCTGATCGGGACTACAATTCTCGGGCTTTGGCGCTACAGAGTGAAGGGCG
____________________________________________________________
consensus TCATCCATCCTCTGATCGGGACTACAATTCTCGGGCTTTGGCGCTACAGAGTGAAGGGCG
. : . : . : . : . : . :
JMSF026D18+ GGCATTGCCAAGCTGAACCGAAGAAAAGTTTGGGTTATGGAGATGGGAGTTTTGGTGGTG
JMFS035F02+ GGCATTGCCAAGCTGAACCGAAGAAAAGTTTGGGTTATGGAGATGGGAGTTTTG
JMSF014A22+ GGCATTGCCAAGCTGAACCGAAGAAAAGTTTGGGTTATGGAGATGGGAGTTTTGGTGGTG
JMSF048H02+ GGCATTGCCAAGCTGAACCGAAGAAAAGTTTGGGTTATGGAGATGGGAGTTTTGGTGGTG
JMSF030H13+ GGCATTGCCAAGCTGAACCGAAGAAAAGTTTGGGTTATGGAGATGGGAGTTTTGGTGGTG
____________________________________________________________
consensus GGCATTGCCAAGCTGAACCGAAGAAAAGTTTGGGTTATGGAGATGGGAGTTTTGGTGGTG
. : . : . : . : . : . :
JMSF026D18+ GATGAGTGGGGGGGAAGGGGGAAGGAGAGGAAGTTAAAGTGGTGCTTTTAACTTGGC
JMSF014A22+ GATGAGTGGGGGGGAAGGGGGAAGGAGAGGAAGTTAAAGTGGTGCTTTTAACTTGGC
JMSF048H02+ GATGAGTGGGGGGGAAGGGGGAAGGAGAGGAAGTTAAAGTGGTGCTTTTAACTTGGC
JMSF030H13+ GATGAGTGGGGGGGAAGGGGGAAGGAGAGGAAGTTAAAGTGGTGCTTTTAACTTGGCTTT
____________________________________________________________
consensus GATGAGTGGGGGGGAAGGGGGAAGGAGAGGAAGTTAAAGTGGTGCTTTTAACTTGGCTTT