Contig 003717:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019N13Sequence211003717 (2)137019303ref|XP_011082377.1|7e-06PREDICTED: probable anion transporter 4, chloroplastic [Sesamum indicum]
JMSF028O22Sequence626003717 (2)ref|XP_006345319.1|2e-53PREDICTED: probable anion transporter 4, chloroplastic-like [Solanum tuberosum]731024597ref|XP_010326196.1|6e-121PREDICTED: probable anion transporter 4, chloroplastic isoform X2 [Solanum lyco

Alignment

This contig is upended


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JMSF028O22+                                             TTCTGCAGCCCACGGGGTTAGGAACG
                      ____________________________________________________________
consensus                                               TTCTGCAGCCCACGGGGTTAGGAACG
 
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JMSF028O22+           TGGCTAAAGACCACAGAGCCACGCCCCAAGCCATGACTACTTTGCCACCAAAATAATCTG
                      ____________________________________________________________
consensus             TGGCTAAAGACCACAGAGCCACGCCCCAAGCCATGACTACTTTGCCACCAAAATAATCTG
 
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JMSF028O22+           CCAGAGTCCCTCCGGCTATTGGTGATATTAGGTAACCCCAGAGAAAAGACGACTGAACAA
                      ____________________________________________________________
consensus             CCAGAGTCCCTCCGGCTATTGGTGATATTAGGTAACCCCAGAGAAAAGACGACTGAACAA
 
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JMSF028O22+           CGCCGGCGAAAGATTGACGCCAAGCCCGGGAGATCGACAGCGGAACAATGGCCACCGACA
                      ____________________________________________________________
consensus             CGCCGGCGAAAGATTGACGCCAAGCCCGGGAGATCGACAGCGGAACAATGGCCACCGACA
 
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JMSF028O22+           TGACAACTCGATCGGCGTTACACAGAGCTAAAGCCAAGCCCACCATAGCCACAACTTTGA
                      ____________________________________________________________
consensus             TGACAACTCGATCGGCGTTACACAGAGCTAAAGCCAAGCCCACCATAGCCACAACTTTGA
 
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JMSF028O22+           CTCTCTCCGACGTGACGAACTCCACCCAGCTCGGCTCAAGCACACCGGCGGGACCGTCGG
                      ____________________________________________________________
consensus             CTCTCTCCGACGTGACGAACTCCACCCAGCTCGGCTCAAGCACACCGGCGGGACCGTCGG
 
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JMSF028O22+           CGGTTGACGGAACATCATTAGACGAAGCTCTGTTTCCGTTTCCGTTTCCGTTCCCGTTCA
                      ____________________________________________________________
consensus             CGGTTGACGGAACATCATTAGACGAAGCTCTGTTTCCGTTTCCGTTTCCGTTCCCGTTCA
 
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JMSF019N13+                                        CCCAGTAAATCAAAGGACTTAGAGTAGCTCT
JMSF028O22+           ACCAGAGAGTCCGAGCCAGGTATTTCGGCCCCAGTAAATCAAAGGACTTAGAGTAGCTCT
                      ____________________________________________________________
consensus             ACCAGAGAGTCCGAGCCAGGTATTTCGGCCCCAGTAAATCAAAGGACTTAGAGTAGCTCT
 
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JMSF019N13+           TGCTCGATGAGCTCGCTGCCCGTGTCTTGACGTTGAACGACAGCGAGGGTTTGGAGGGAT
JMSF028O22+           TGCTCGATGAGCTCGCTGCCCGTGTCTTGACGTTGAACGACAGCGAGGGTTTGGAGGGAT
                      ____________________________________________________________
consensus             TGCTCGATGAGCTCGCTGCCCGTGTCTTGACGTTGAACGACAGCGAGGGTTTGGAGGGAT
 
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JMSF019N13+           TAAGGTTTAATCGGAGGCTGCCGGGAATCAACGTTGTACGCCGGAGAGCCACCGGAGAAT
JMSF028O22+           TAAGGTTTAATCGGAGGCTGCCGGGAATCAACGTTGTACGCCGGAGAGCCACCGGAGAAT
                      ____________________________________________________________
consensus             TAAGGTTTAATCGGAGGCTGCCGGGAATCAACGTTGTACGCCGGAGAGCCACCGGAGAAT
 
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JMSF019N13+           CCATGCGGAGAGTCGGTAAAACAGTAGACTGAGGAGAATTGATTGAATTGGAATCTTGCC
JMSF028O22+           CCATGCGGAGAGTCGGTAAAACAGTAGACTGAGGAGAATTGATTGAATTGGAATCTTGCC
                      ____________________________________________________________
consensus             CCATGCGGAGAGTCGGTAAAACAGTAGACTGAGGAGAATTGATTGAATTGGAATCTTGCC