Contig 003714:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS161A02Sequence642003714 (3)emb|CDY66909.1|8e-30BnaCnng52820D [Brassica napus]
JMSF028C17Sequence671003714 (3)emb|CDP08711.1|2e-69unnamed protein product [Coffea canephora]
JMSF052D19Sequence633003714 (3)ref|XP_006358640.1|2e-59PREDICTED: mitochondrial adenine nucleotide transporter ADNT1-like [Solanum tub106021619

Alignment

This contig is upended


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JMFS161A02+                            AGTACATCATCAGATATGTTAAAACAAAGATTTACATATGAAA
                      ____________________________________________________________
consensus                              AGTACATCATCAGATATGTTAAAACAAAGATTTACATATGAAA
 
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JMFS161A02+           GCGCAACACGTGAAGAACAATAGACACATGTCTTCAGTGGCAAACAAAACACAAGAAATC
                      ____________________________________________________________
consensus             GCGCAACACGTGAAGAACAATAGACACATGTCTTCAGTGGCAAACAAAACACAAGAAATC
 
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JMFS161A02+           TTATATTGATTTGTAGAATTAAAATGATTTCCTGCCATGACAAGCCTAAACATGAAAGGA
                      ____________________________________________________________
consensus             TTATATTGATTTGTAGAATTAAAATGATTTCCTGCCATGACAAGCCTAAACATGAAAGGA
 
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JMFS161A02+           AGCACATACCGTTTCCTGTTTGTTCCCTATATAGCCATAAGATGCCCCTGTTTCAATATC
                      ____________________________________________________________
consensus             AGCACATACCGTTTCCTGTTTGTTCCCTATATAGCCATAAGATGCCCCTGTTTCAATATC
 
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JMFS161A02+           AATGAAAGGAATGAGATATCATATAACACAATGCTTTAGTGGTAATGGTAACATGGGATG
                      ____________________________________________________________
consensus             AATGAAAGGAATGAGATATCATATAACACAATGCTTTAGTGGTAATGGTAACATGGGATG
 
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JMFS161A02+           AGAAGTGATTTATGAATAAACTAATTTAATATCCGGAACTAAAACCTCCAGAGTTACTGT
                      ____________________________________________________________
consensus             AGAAGTGATTTATGAATAAACTAATTTAATATCCGGAACTAAAACCTCCAGAGTTACTGT
 
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JMFS161A02+           ACCAAAATTAAAACTAAAAGTGAACATTCCGTCATTCAGGGAAGTTGCAGAAATCAGATT
                      ____________________________________________________________
consensus             ACCAAAATTAAAACTAAAAGTGAACATTCCGTCATTCAGGGAAGTTGCAGAAATCAGATT
 
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JMFS161A02+           TTTGTAAGGTAAAATTGAACAACCATGAGAAAACATAGTAATGCTAAACAATCACATCTT
                      ____________________________________________________________
consensus             TTTGTAAGGTAAAATTGAACAACCATGAGAAAACATAGTAATGCTAAACAATCACATCTT
 
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JMFS161A02+           TGGACAGGATCATACTTGGAGGCCTGCTCATAGCTGAAGAACTTGACAGCTGAGTTTGGG
JMSF052D19+                                      TCATAGCTGAAGAACTTGACAGCTGAGTTTGGG
JMSF028C17+                         CTTGGAGGCCTGCTCATAGCTGAAGAACTTGACAGCTGAGTTTGGG
                      ____________________________________________________________
consensus             TGGACAGGATCATACTTGGAGGCCTGCTCATAGCTGAAGAACTTGACAGCTGAGTTTGGG
 
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JMFS161A02+           ACGATGCGTGCACAGTTGGTCCCATTACCCTTAAATAATCCTCTGAAGCCCTCAGTTCTC
JMSF052D19+           ACGATGCGTGCACAGTTGGTCCCATTACCCTTAAATAATCCTCTGAAGCCCTCAGTTCTC
JMSF028C17+           ACGATGCGTGCACAGTTGGTCCCATTACCCTTAAATAATCCTCTGAAGCCCTCAGTTCTC
                      ____________________________________________________________
consensus             ACGATGCGTGCACAGTTGGTCCCATTACCCTTAAATAATCCTCTGAAGCCCTCAGTTCTC
 
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JMFS161A02+           CAGATATATTTTAGGCCTTGAATTGTGCCATTGTATTTTATATTATGAGGATT       
JMSF052D19+           CAGATATATTTTAGGCCTTGAATTGTGCCATTGTATTTTATATTATGAGGATTCTGAACC
JMSF028C17+           CAGATATATTTTAGGCCTTGAATTGTGCCATTGTATTTTATATTATGAGGATTCTGAACC
                      ____________________________________________________________
consensus             CAGATATATTTTAGGCCTTGAATTGTGCCATTGTATTTTATATTATGAGGATTCTGAACC
 
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JMSF052D19+           TGTAGCAATATTTTTAAGCGTTCCAGAGGAGCAACAGCTGTCCGTGACACGCCACCAGCG
JMSF028C17+           TGTAGCAATATTTTTAAGCGTTCCAGAGGAGCAACAGCTGTCCGTGACACGCCACCAGCG
                      ____________________________________________________________
consensus             TGTAGCAATATTTTTAAGCGTTCCAGAGGAGCAACAGCTGTCCGTGACACGCCACCAGCG
 
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JMSF052D19+           ACACCTCCAGCGACGAGAGACTTGCAGATACTTAAGACGGCATGGCTAGATGGCTTAATT
JMSF028C17+           ACACCTCCAGCGACGAGAGACTTGCAGATACTTAAGACGGCATGGCTAGATGGCTTAATT
                      ____________________________________________________________
consensus             ACACCTCCAGCGACGAGAGACTTGCAGATACTTAAGACGGCATGGCTAGATGGCTTAATT
 
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JMSF052D19+           TCCTCCCTAGCGAGCTTCGCCTCTTCGGCGAGGTTTACAATCTTCTCCACCGCCGATTCG
JMSF028C17+           TCCTCCCTAGCGAGCTTCGCCTCTTCGGCGAGGTTTACAATCTTCTCCACCGCCGATTCG
                      ____________________________________________________________
consensus             TCCTCCCTAGCGAGCTTCGCCTCTTCGGCGAGGTTTACAATCTTCTCCACCGCCGATTCG
 
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JMSF052D19+           CCAGCCTTCACATCCTCCGAAGCCATAAAAGACAAAGCGAGGGAAAAAAGACGATCTCGC
JMSF028C17+           CCAGCCTTCACATCCTCCGAAGCCATAAAAGACAAAGCGAGGGAAAAAAGACGATCTCGC
                      ____________________________________________________________
consensus             CCAGCCTTCACATCCTCCGAAGCCATAAAAGACAAAGCGAGGGAAAAAAGACGATCTCGC
 
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JMSF052D19+           CAACAAAAAGATCGAATTATCCGGAGAACTTAAATACCAGAATTAAGCCAAACAGACCAC
JMSF028C17+           CAACAAAAAGATCGAATTATCCGGAGAACTTAAATACCAGAATTAAGCCAAACAGACCAC
                      ____________________________________________________________
consensus             CAACAAAAAGATCGAATTATCCGGAGAACTTAAATACCAGAATTAAGCCAAACAGACCAC
 
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JMSF052D19+           ACTACGATCTCGAGTCTCGACTCCTCGATACGATCAATCGACGACTCGGCAACTTATCAA
JMSF028C17+           ACTACGATCTCGAGTCTCGACTCCTCGATACGATCAATCGACGACTCGGCAACTTATCAA
                      ____________________________________________________________
consensus             ACTACGATCTCGAGTCTCGACTCCTCGATACGATCAATCGACGACTCGGCAACTTATCAA
 
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JMSF052D19+           AGCACTTGCATTTTTTTCTCCAAGCGTTCCACACTCTATCTCTCTAGGTGGCGGCTGGCG
JMSF028C17+           AGCACTTGCATTTTTTTCTCCAAGCGTTCCACACTCTATCTCTCTAGGTGGCGGCTGGCG
                      ____________________________________________________________
consensus             AGCACTTGCATTTTTTTCTCCAAGCGTTCCACACTCTATCTCTCTAGGTGGCGGCTGGCG
 
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JMSF052D19+           GCTGGCGGCGGTCGGTGACGGCGGCGGGGAGACAGAGAGAGAGAAGCAGATCAGCACCCA
JMSF028C17+           GCTGGCGGCGGTCGGTGACGGCGGCGGGGAGACAGAGAGAGAGAAGCAGATCAGCACCCA
                      ____________________________________________________________
consensus             GCTGGCGGCGGTCGGTGACGGCGGCGGGGAGACAGAGAGAGAGAAGCAGATCAGCACCCA