Contig 003712:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013M24Sequence257003712 (2)713001391 (2)ref|XP_011077870.1|5e-85PREDICTED: probable cytosolic iron-sulfur protein assembly protein CIAO1 homolo
JMSF028B20Sequence646003712 (2)ref|XP_011077870.1|6e-52PREDICTED: probable cytosolic iron-sulfur protein assembly protein CIAO1 homolo715001391 (2)ref|XP_011077870.1|6e-85PREDICTED: probable cytosolic iron-sulfur protein assembly protein CIAO1 homolo

Alignment

This contig is upended


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JMSF028B20+                         TCCCATATAGCAGTAGTGGCATCAAAGCTTGCAGTTGCCATCAATT
                      ____________________________________________________________
consensus                           TCCCATATAGCAGTAGTGGCATCAAAGCTTGCAGTTGCCATCAATT
 
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JMSF028B20+           TGCCAGATGGTGACCATGCACAGGATCTAACAGTTCTTGTGTGAGTCTCCTCTAAAACTG
                      ____________________________________________________________
consensus             TGCCAGATGGTGACCATGCACAGGATCTAACAGTTCTTGTGTGAGTCTCCTCTAAAACTG
 
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JMSF028B20+           CCTTGCAATGGAAAGAACCGGATGGGGAGCTCTGTTCCCAAATACGAACGGTCTTATCGC
                      ____________________________________________________________
consensus             CCTTGCAATGGAAAGAACCGGATGGGGAGCTCTGTTCCCAAATACGAACGGTCTTATCGC
 
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JMSF028B20+           CGCTACAAGAGGCGAGTACTGCGGGTACGCCGTCAGTTCCGGTGGCCGGTTTCCAAGCGA
                      ____________________________________________________________
consensus             CGCTACAAGAGGCGAGTACTGCGGGTACGCCGTCAGTTCCGGTGGCCGGTTTCCAAGCGA
 
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JMSF028B20+           CACTCCAGACCCTGTCGCTGTGGCCTTCGAGCCTCTGAATCTCCTTCAGCTCGAAAGTTT
                      ____________________________________________________________
consensus             CACTCCAGACCCTGTCGCTGTGGCCTTCGAGCCTCTGAATCTCCTTCAGCTCGAAAGTTT
 
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JMSF028B20+           TGTCCAAGAAATTCATGACGAGGATCGCGGAGCAGAGCTGCTGTGAAGTGTCGGAGCACC
                      ____________________________________________________________
consensus             TGTCCAAGAAATTCATGACGAGGATCGCGGAGCAGAGCTGCTGTGAAGTGTCGGAGCACC
 
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JMSF013M24+                                                      AGATCAGAGTTTTAACT
JMSF028B20+           GGCTGTGTGTTACGAGTTCTTCGGCACAGTGCATGCGCCGCCGAGATCAGAGTTTTAACT
                      ____________________________________________________________
consensus             GGCTGTGTGTTACGAGTTCTTCGGCACAGTGCATGCGCCGCCGAGATCAGAGTTTTAACT
 
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JMSF013M24+           GGTAAGACCGTGAGAGACCCCGTGCACGGCACACCCGCGAAGAAAATACTTGTACCCGCA
JMSF028B20+           GGTAAGACCGTGAGAGACCCCGTGCACGGCACACCCGCGAAGAAAATACTTGTACCCGCA
                      ____________________________________________________________
consensus             GGTAAGACCGTGAGAGACCCCGTGCACGGCACACCCGCGAAGAAAATACTTGTACCCGCA
 
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JMSF013M24+           CAATACTAGGGATGTCAATTGTACACGCATCCAACGGGGAACCCGATTCCCCGCTTCGAT
JMSF028B20+           CAATACTAGGGATGTCAATTGTACACGCATCCAACGGGGAACCCGATTCCCCGCTTCGAT
                      ____________________________________________________________
consensus             CAATACTAGGGATGTCAATTGTACACGCATCCAACGGGGAACCCGATTCCCCGCTTCGAT
 
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JMSF013M24+           GGGGATGGGGATGGGGATAGAAATAGGAGATCGGGGATGGAGATGGGGGCAATTTTGAAT
JMSF028B20+           GGGGATGGGGATGGGGATAGAAATAGGAGATCGGGGATGGAGATGGGGGCAATTTTGAAT
                      ____________________________________________________________
consensus             GGGGATGGGGATGGGGATAGAAATAGGAGATCGGGGATGGAGATGGGGGCAATTTTGAAT
 
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JMSF013M24+           TCTCCGCCGGGGATGGGGATGGGGAGTACTCTCCCCGCCCTGCCCGGTCCCCGATGTATC
JMSF028B20+           TCTCCGCCGGGGATGGGGATGGGGAGTACTCTCCCCGCCCTGCCCGGTCCCCGATGTATC
                      ____________________________________________________________
consensus             TCTCCGCCGGGGATGGGGATGGGGAGTACTCTCCCCGCCCTGCCCGGTCCCCGATGTATC