Contig 003702:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049E02Sequence645003702 (2)ref|XP_009613228.1|1e-66PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial609008384 (2)
JMSF026H14Sequence586003702 (2)ref|XP_009613228.1|9e-50PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial780008384 (2)ref|XP_006346504.1|9e-34PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial

Alignment

This contig is upended


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JMFF049E02+                         AAATTGGAAAACAAACTCAATAATGCATTACAAGTCTCAATCTTGG
                      ____________________________________________________________
consensus                           AAATTGGAAAACAAACTCAATAATGCATTACAAGTCTCAATCTTGG
 
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JMFF049E02+           GCAAAATCCTCTTCTCTATCATCAAGTAGAAGCACTTCAATGCCTCGTCGCATTTCTTCA
JMSF026H14+                         TCTATCATCAAGTAGAAGCACTTCAATGCCTCGTCGCATTTCTTCA
                      ____________________________________________________________
consensus             GCAAAATCCTCTTCTCTATCATCAAGTAGAAGCACTTCAATGCCTCGTCGCATTTCTTCA
 
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JMFF049E02+           ATTCACAATGCACCCGCACTAGAAAATCCAGAGATATCGTGCCCTTTATCTCCAACTTCT
JMSF026H14+           ATTCACAATGCACCCGCACTAGAAAATCCAGAGATATCGTGCTCTTTATCTCCAACTTCT
                      ____________________________________________________________
consensus             ATTCACAATGCACCCGCACTAGAAAATCCAGAGATATCGTGCTCTTTATCTCCAACTTCT
 
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JMFF049E02+           CTCGAGCACTCATTAACCCATCAAAAATCTCTCTTTGCGTTGCAGTGCGAGAGTTGACTA
JMSF026H14+           CTCGAGCACTCATTAACCCATCAAAAATCTCTCTGTGCGTCGCAGTGCGAGAGTTGACTA
                      ____________________________________________________________
consensus             CTCGAGCACTCATTAACCCATCAAAAATCTCTCTTTGCGTTGCAGTGCGAGAGTTGACTA
 
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JMFF049E02+           CTTGCTTGAGTAGCTGTATTGCTTGATGTGGTGATGGAAGGCGAGAGAGTATTGAAATGG
JMSF026H14+           CTTGCTNGAGTAGCTGTATTGCTTGATGTGGTGATGGAAGGCGAGAGAGTATTGAAATGG
                      ____________________________________________________________
consensus             CTTGCTTGAGTAGCTGTATTGCTTGATGTGGTGATGGAAGGCGAGAGAGTATTGAAATGG
 
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JMFF049E02+           CGATGCAGTAGCAGTCAATGTCGAGAGACTTGGGGCTGAGCTTTTGAATGAATTCGAGAA
JMSF026H14+           CGATGCAGTAGCAGTCAATGTCGAGAGACTTGGGGCTGAGCTTTTGAATGAATTCGAGAA
                      ____________________________________________________________
consensus             CGATGCAGTAGCAGTCAATGTCGAGAGACTTGGGGCTGAGCTTTTGAATGAATTCGAGAA
 
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JMFF049E02+           CGTGGCCTGGGGATGAGCGGAGATTTGAGAGGGTGGAGGAGACCAAGGTGGGCGTAAGTT
JMSF026H14+           CGTGNCCTGGGGATGAGCGGAGATTTGAGAGGNTGGAGGAGACCAAGGTGGGCGTAAGTT
                      ____________________________________________________________
consensus             CGTGGCCTGGGGATGAGCGGAGATTTGAGAGGGTGGAGGAGACCAAGGTGGGCGTAAGTT
 
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JMFF049E02+           CGGGCAAAACCTGTTTGATGAATTGCCACTGAGAAGAAATCACACAGTCCCGGAGAGCCT
JMSF026H14+           CGGGCAAAACCTGTTTGATGAATTGCCACTGAGAAGAAATCACACAGTCCCNGAGAGCCT
                      ____________________________________________________________
consensus             CGGGCAAAACCTGTTTGATGAATTGCCACTGAGAAGAAATCACACAGTCCCGGAGAGCCT
 
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JMFF049E02+           CGCCTGTGATTGCAGGGGAGGTTGTGGGCTTCGCGGTTGTAACAAGATTACGTGATGAGA
JMSF026H14+           CGCCTGTGATTGCAGGGGAGGTTGTGGGCTTCNCGGTTGTAACAAGATTACGTNATGAGA
                      ____________________________________________________________
consensus             CGCCTGTGATTGCAGGGGAGGTTGTGGGCTTCGCGGTTGTAACAAGATTACGTGATGAGA
 
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JMFF049E02+           AGTGCCTGATAACCTGTAAAAGCTTAGGCCTATCGAGCTTTCTGACTGGAATAGCTTGGC
JMSF026H14+           AGTGCCTGATAACCTGTAAAAGNTTAGGCCTATCGAGCTTTCTGACTGGAATAGCTTGGC
                      ____________________________________________________________
consensus             AGTGCCTGATAACCTGTAAAAGCTTAGGCCTATCGAGCTTTCTGACTGGAATAGCTTGGC
 
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JMFF049E02+           GGATTCTCATCTTCCACGGCTCGAGGCGG-ACGCGGGAGGTCTGCAATTTGTTGG     
JMSF026H14+           GGATTCTCATCTTCCACGGCTCGAGGCGGAACGCGGGAGGTCTGCAATTTGTTGGNTGCC
                      ____________________________________________________________
consensus             GGATTCTCATCTTCCACGGCTCGAGGCGGAACGCGGGAGGTCTGCAATTTGTTGGNTGCC