| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022P20 | Sequence | 544 | 003700 (4) | ref|NP_001234279.1| | 6e-29 | anti-PCD protein-like [Solanum lycopersicum] gb|ABA41597.1| putative anti-PCD pr | 767 | 001109 (3) | ref|XP_011022240.1| | 3e-58 | PREDICTED: thiol-disulfide oxidoreductase LTO1 isoform X2 [Populus euphratica] |
| JMFF038M04 | Sequence | 612 | 003700 (4) | ref|NP_001234279.1| | 1e-28 | anti-PCD protein-like [Solanum lycopersicum] gb|ABA41597.1| putative anti-PCD pr | 766 | 001109 (3) | ref|XP_011022240.1| | 3e-58 | PREDICTED: thiol-disulfide oxidoreductase LTO1 isoform X2 [Populus euphratica] |
| JMSF019E02 | Sequence | 313 | 003700 (4) | ref|XP_006340794.1| | 57.8 | PREDICTED: uncharacterized protein LOC102581146 [Solanum tuberosum] | 742 | 001109 (3) | ref|XP_011022240.1| | 1e-79 | PREDICTED: thiol-disulfide oxidoreductase LTO1 isoform X2 [Populus euphratica] |
| JMSF026C20 | Sequence | 649 | 003700 (4) | ref|NP_001234279.1| | 2e-28 | anti-PCD protein-like [Solanum lycopersicum] gb|ABA41597.1| putative anti-PCD pr | |||||
This contig is upended
. : . : . : . : . : . :
JMFF038M04+ AGATTACAGAGTATGAAGCGGCACAAGTTCACTAGGGGCACTGGGGCA
JMSF026C20+ GAGATTACAGAGTATGAAGCGGCACAAGTTCACTAGGGGCACTGGGGCA
____________________________________________________________
consensus GAGATTACAGAGTATGAAGCGGCACAAGTTCACTAGGGGCACTGGGGCA
. : . : . : . : . : . :
JMFF038M04+ GATCATTCACGAAATGAGANCAGAAATTAAGAGTAGCAATACTGAAGGAAATAAAAATAT
JMFF022P20+ CAGAAATTAAGAGTAGCAATACTGAAGGAAATAAAAATAT
JMSF026C20+ GATCATTCACGAAATGAGAACAGAAATTAAGAGTAGCAATACTGAAGGAAATAAAAATAT
____________________________________________________________
consensus GATCATTCACGAAATGAGAACAGAAATTAAGAGTAGCAATACTGAAGGAAATAAAAATAT
. : . : . : . : . : . :
JMFF038M04+ CATAGGTCACATCGATATGCATCAAGAACTTCAAGAGATTACCAAAAACAACTGAATAGC
JMFF022P20+ CATAGGTCACATCGATATGCATCAAGAACTTCAAGAGATTACCAAAAACAACTGAATAGC
JMSF026C20+ CATAGGTCACATCGATATGCATCAAGAACTTCAAGAGATTACCAAAAACAACTGAATAGC
____________________________________________________________
consensus CATAGGTCACATCGATATGCATCAAGAACTTCAAGAGATTACCAAAAACAACTGAATAGC
. : . : . : . : . : . :
JMFF038M04+ TGCTGTTAAGGATGTCGCCGCAGCTGCCACCACCAACGGGGCAAAAGGCATCAGACTCCG
JMFF022P20+ TGCTGTTAAGGATGTCGCCGCAGCTGCCACCACCAACGGGGCAAAAGGCATCAGACTCCG
JMSF026C20+ TGCTGTTAAGGATGTCGCCGCAGCTGCCACCGCCAACGGGGCAAAAGGCATCAGACTCCG
____________________________________________________________
consensus TGCTGTTAAGGATGTCGCCGCAGCTGCCACCACCAACGGGGCAAAAGGCATCAGACTCCG
. : . : . : . : . : . :
JMFF038M04+ TGAGTTTGAGGTACGTCAAGTACGAAGTTTCCAGGAATCCGATGCCTCCCAGGGCTGCAC
JMFF022P20+ TGAGTTTGAGGTACGTCAAGTACGAAGTTTCCAGGAATCCGATGCCTCCCAGGGCTGCAC
JMSF019E02+ CCAGGAATCCGATGCCTCCCAGGGCTGCAC
JMSF026C20+ TGAGTTTGAGGTACGTCAAGTACGAAGTTTCCAGGAATCCGATGCCTCCCAGGGCTGCAC
____________________________________________________________
consensus TGAGTTTGAGGTACGTCAAGTACGAAGTTTCCAGGAATCCGATGCCTCCCAGGGCTGCAC
. : . : . : . : . : . :
JMFF038M04+ ACCAATTGTATGCTGAAATGCTCGAACCACTGCTAGTAGAAGGAGACGACAACTCCTCCG
JMFF022P20+ ACCAATTGTATGCTGAAATGCTCGAACCACTGCTAGTAGAAGGAGACGACAACTCCTCCG
JMSF019E02+ ACCAATTGTATGCTGAAATGCTCGAACCACTGCTAGTAGAAGGAGACGACAACTCCTCCG
JMSF026C20+ ACCAATTGTATGCTGAAATGCTCGAACCACTGCTAGTAGAAGGAGACGACAACTCCTCCG
____________________________________________________________
consensus ACCAATTGTATGCTGAAATGCTCGAACCACTGCTAGTAGAAGGAGACGACAACTCCTCCG
. : . : . : . : . : . :
JMFF038M04+ TCTTGGATTCTTTCTCCGCGTCTGTAACTTGCTCCGACGAGCAGTGCACTCGAAGCATCA
JMFF022P20+ TCTTGGATTCTTTCTCCGCGTCTGTAACTTGCTCCGACGAGCAGTGCACTCGAAGCATCA
JMSF019E02+ TCTTGGATTCTTTCTCCGCGTCTGTAACTTGCTCCGACGAGCAGTGCACTCGAAGCATCA
JMSF026C20+ TCTTGGATTCTTTCTCCGCGTCTGTAACTTGCTCCGACGAGCAGTGCACTCGAAGCATCA
____________________________________________________________
consensus TCTTGGATTCTTTCTCCGCGTCTGTAACTTGCTCCGACGAGCAGTGCACTCGAAGCATCA
. : . : . : . : . : . :
JMFF038M04+ GCAATTGCCGATCGCGACCGCTCTTGAGTTGTAAGGGAATAGATAGTGAATTGGAACGAG
JMFF022P20+ GCAATTGCCGATCGCGACCGCTCTTGAGTTGTAAGGGAATAGATAGTGAATTGGAACGAG
JMSF019E02+ GCAATTGCCGATCGCGACCGCTCTTGAGTTGTAAGGGAATAGATAGTGAATTGGAACGAG
JMSF026C20+ GCAATTGCCGATCGCGACCGCTCTTGAGTTGTAAGGGAATAGATAGTGAATTGGAACGAG
____________________________________________________________
consensus GCAATTGCCGATCGCGACCGCTCTTGAGTTGTAAGGGAATAGATAGTGAATTGGAACGAG
. : . : . : . : . : . :
JMFF038M04+ AGGAGAAGAGAAGAGATGAGTGGTTGAATAGTGGGGAAGACGAGACGCCGATGAGACTCG
JMFF022P20+ AGGAGAAGAGAAGAGATGAGTGGTTGAATAGTGGGGAAGACGAGACGCCGATGAGACTCG
JMSF019E02+ AGGAGAAGAGAAGAGATGAGTGGTTGAATAGTGGGGAAGACGAGACGCCGATGAGACTCG
JMSF026C20+ AGGAGAAGAGAAGAGATGAGTGGTTGAATAGTGGGGAAGACGAGACGCCGATGAGACTCG
____________________________________________________________
consensus AGGAGAAGAGAAGAGATGAGTGGTTGAATAGTGGGGAAGACGAGACGCCGATGAGACTCG
. : . : . : . : . : . :
JMFF038M04+ CCATCAGCTCCTCCGTCGAGCGGTGGCGGGGGTGGTTTGACTAGATTTATTGGCGGTGGA
JMFF022P20+ CCATCAGCTCCTCCGTCGAGCGGTGGCGGGGGTGGTTTGACTAGATTTATTGGCGGTGGA
JMSF019E02+ CCATCAGCTCCTCCGTCGAGCGGTGGCGGGGGTGGTTTGACT
JMSF026C20+ CCATCAGCTCCTCCGTCGAGCGGTGGCGGGGGTGGTTTGACTAGATTTATTGGCGGTGGA
____________________________________________________________
consensus CCATCAGCTCCTCCGTCGAGCGGTGGCGGGGGTGGTTTGACTAGATTTATTGGCGGTGGA
. : . : . : . : . : . :
JMFF038M04+ AGAGCGGAATTTGACTGATTTGTT
JMFF022P20+ AGAGCGGAATTTGACTGATTTGTT
JMSF026C20+ AGAGCGGAATTTGACTGATTTGTTGAAAGATTTATTTTTGGAGTTTTGGTTTAGTAACCC
____________________________________________________________
consensus AGAGCGGAATTTGACTGATTTGTTGAAAGATTTATTTTTGGAGTTTTGGTTTAGTAACCC