clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF008B21 | Sequence | 330 | 003699 (6) | 675 | 004276 (10) | ref|XP_009764657.1| | 2e-96 | PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 isoform X2 | |||
JMSF026C07 | Sequence | 655 | 003699 (6) | 726 | 004276 (10) | ref|XP_009764657.1| | 1e-82 | PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 isoform X2 | |||
JMSF026D07 | Sequence | 654 | 003699 (6) | 659 | 004276 (10) | ref|XP_009764657.1| | 4e-78 | PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 isoform X2 | |||
JMSF035P16 | Sequence | 644 | 003699 (6) | ref|XP_011091530.1| | 1e-31 | PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 [Sesamum i | 718 | 004276 (10) | ref|XP_009764657.1| | 6e-110 | PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 isoform X2 |
JMSF043D03 | Sequence | 754 | 003699 (6) | ref|XP_009770019.1| | 3e-96 | PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 [Nicotiana | 721 | 004276 (10) | ref|XP_009764657.1| | 6e-110 | PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 isoform X2 |
JMSF048A10 | Sequence | 715 | 003699 (6) | ref|XP_009588664.1| | 1e-77 | PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 [Nicotiana | 770 | 004276 (10) | ref|XP_009764657.1| | 1e-114 | PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 isoform X2 |
This contig is upended
. : . : . : . : . : . :
JMSF043D03+ GCTTCAGCAAATATCCCAGTGACCTGGTAAACTGTGCCCACAATGTTGAAGTGAATT
____________________________________________________________
consensus GCTTCAGCAAATATCCCAGTGACCTGGTAAACTGTGCCCACAATGTTGAAGTGAATT
. : . : . : . : . : . :
JMSF043D03+ TCCCCATAGGACGATACGACAACACCAATGCTGACTAATACCATGTTCAAGAATACATCA
JMSF048A10+ ATACGACAACACCAATGCTGACTAATACCATGTTCAAGAATACATCA
____________________________________________________________
consensus TCCCCATAGGACGATACGACAACACCAATGCTGACTAATACCATGTTCAAGAATACATCA
. : . : . : . : . : . :
JMSF043D03+ CATCTTAGCTTGTCAGTTCCACAAATTACCGCCATGACAAATGTGGCAACTGGCATTAGA
JMSF048A10+ CATCTTAGCTTGTCAGTTCCACAAATTACCGCCATGACAAATGTGGCAACTGGCATTAGA
____________________________________________________________
consensus CATCTTAGCTTGTCAGTTCCACAAATTACCGCCATGACAAATGTGGCAACTGGCATTAGA
. : . : . : . : . : . :
JMSF043D03+ GCCTTGAGCATCTGGATGAAGGCTACAGATATGAACAAGTAAGCAGTGTTGCCAAACCAA
JMSF048A10+ GCCTTGAGCATCTGGATGAAGGCTACAGATATGAACAAGTAAGCAGTGTTGCCAAACCAA
____________________________________________________________
consensus GCCTTGAGCATCTGGATGAAGGCTACAGATATGAACAAGTAAGCAGTGTTGCCAAACCAA
. : . : . : . : . : . :
JMSF043D03+ AGACTAGCTGCAAAGAAAGCACTAATAGGGATCACACATGTTGCATATATTTCAAATGTC
JMSF048A10+ AGACTAGCTGCAAAGAAAGCACTAATAGGGATCACACATGTTGCATATATTTCAAATGTC
JMSF035P16+ ATCACACATGTTGCATATATTTCAAATGTC
____________________________________________________________
consensus AGACTAGCTGCAAAGAAAGCACTAATAGGGATCACACATGTTGCATATATTTCAAATGTC
. : . : . : . : . : . :
JMSF043D03+ ATCTTGACAGGAGACACAACCTTGAGAACACGGATAAGAAAGAATGCTACTAAGCCTGAA
JMSF048A10+ ATCTTGACAGGAGACACAACCTTGAGAACACGGATAAGAAAGAATGCTACTAAGCCTGAA
JMSF035P16+ ATCTTGACAGGAGACACAACCTTGAGAACACGGATAAGAAAGAATGCTACTAAGCCTGAA
____________________________________________________________
consensus ATCTTGACAGGAGACACAACCTTGAGAACACGGATAAGAAAGAATGCTACTAAGCCTGAA
. : . : . : . : . : . :
JMSF043D03+ AAGCCCATGTGAATCATGGTGAGTGTAATAGGAAATGGGAAATTGAAATATTTTGGTGAG
JMSF048A10+ AAGCCCATGTGAATCATGGTGAGTGTAATAGGAAATGGGAAATTGAAATATTTTGGTGAG
JMSF035P16+ AAGCCCATGTGAATCATGGTGAGTGTAATAGGAAATGGGAAATTGAAATATTTTGGTGAG
____________________________________________________________
consensus AAGCCCATGTGAATCATGGTGAGTGTAATAGGAAATGGGAAATTGAAATATTTTGGTGAG
. : . : . : . : . : . :
JMSF043D03+ AGCACCCACTTGTTGTACAAAATAACCCCAGACGAAAGCAGAATATAAATAAGGAGATAT
JMSF048A10+ AGCACCCACTTGTTGTACAAAATAACCCCAGACGAAAGCAGAATATAAATAAGGAGATAT
JMSF008B21+ TGTTGTACAAAATANCCCCAGACGAAAGCAGAATATAAATAAGGAGATAT
JMSF035P16+ AGCACCCACTTGTTGTACAAAATAACCCCAGACGAAAGCAGAATATAAATAAGGAGATAT
____________________________________________________________
consensus AGCACCCACTTGTTGTACAAAATAACCCCAGACGAAAGCAGAATATAAATAAGGAGATAT
. : . : . : . : . : . :
JMSF043D03+ AGATAAGTCAAAAGAAGTTGTTTGTTAATCATCATGTCTGGGTAGCACTGGTCTCCTGCT
JMSF048A10+ AGATAAGTCAAAAGAAGTTGTTTGTTAATCATCATGTCTGGGTAGCACTGGTCTCCTGCT
JMSF008B21+ AGATAAGTCAAAAGAAGTTGTTTGTTAATCATCATGTCTGGGTAGCACTGGTCTCCTGCT
JMSF035P16+ AGATAAGTCAAAAGAAGTTGTTTGTTAATCATCATGTCTGGGTAGCACTGGTCTCCTGCT
____________________________________________________________
consensus AGATAAGTCAAAAGAAGTTGTTTGTTAATCATCATGTCTGGGTAGCACTGGTCTCCTGCT
. : . : . : . : . : . :
JMSF043D03+ CCCCAAAGATGAAGGAAAAATCTGCTGAAGAATGAAGGCAGATTGGAGGTGCAATATTCA
JMSF048A10+ CCCCAAAGATGAAGGAAAAATCTGCTGAAGAATGAAGGCAGATTGGAGGTGCAATATTCA
JMSF008B21+ CCCCAAAGATGAAGGAAAAATCTGCT
JMSF035P16+ CCCCAAAGATGAAGGAAAAATCTGCTGAAGAATGAAGGCAGATTGGAGGTGCAATATTCA
JMSF026D07+ AGATGAAGGAAAAATCTGCTGAAGAATGAAGGCAGATTGGAGGTGCAATATTCA
JMSF026C07+ AGATGAAGGAAAAATCTGCTGAAGAATGAAGGCAGATTGGAGGTGCAATATTCA
____________________________________________________________
consensus CCCCAAAGATGAAGGAAAAATCTGCTGAAGAATGAAGGCAGATTGGAGGTGCAATATTCA
. : . : . : . : . : . :
JMSF043D03+ GTTTCAACT
JMSF048A10+ GTTTCAACTGCAGTTAGTCATCCAAATAATGAGCAGTTCGCT
JMSF035P16+ GTTTCAACTGCAGTTAGTCATCCAAATAATGAGCAGTTCGCTGTTACTATAAAACATAGT
JMSF026D07+ GTTTCAACTGCAGTTAGTCATCCAAATAATGAGCAGTTCGCTGTTACTATAAAACATAGT
JMSF026C07+ GTTTCAACTGCAGTTAGTCATCCAAATAATGAGCAGTTCGCTGTTACTATAAAACATAGT
____________________________________________________________
consensus GTTTCAACTGCAGTTAGTCATCCAAATAATGAGCAGTTCGCTGTTACTATAAAACATAGT
. : . : . : . : . : . :
JMSF035P16+ CAAAACGCTGATCCAATCGCAGAGAGAGGTGACAATAGCAGACTAGAAAATGCAACAGTA
JMSF026D07+ CAAAACGCTGATCCAATCGCAGAGAGAGGTGACAATAGCAGACTAGAAAATGCAACAGTA
JMSF026C07+ CAAAACGCTGATCCAATCGCAGAGAGAGGTGACAATAGCAGACTAGAAAATGCAACAGTA
____________________________________________________________
consensus CAAAACGCTGATCCAATCGCAGAGAGAGGTGACAATAGCAGACTAGAAAATGCAACAGTA
. : . : . : . : . : . :
JMSF035P16+ AGTAAATGAATACATCTAGAAAAGCATTTTTAAAAAATGAAAGGTAAGCATGAGTGAGAC
JMSF026D07+ AGTAAATGAATACATCTAGAAAAGCATTTTTAAAAAATGAAAGGTAAGCATGAGTGAGAC
JMSF026C07+ AGTAAATGAATACATCTAGAAAAGCATTTTTAAAAAATGAAAGGTAAGCATGAGTGAGAC
____________________________________________________________
consensus AGTAAATGAATACATCTAGAAAAGCATTTTTAAAAAATGAAAGGTAAGCATGAGTGAGAC
. : . : . : . : . : . :
JMSF035P16+ AAGAGAAAGCATAAAAGAAGAGCAAATCGATGAAGAAAGAAAGCAAAAGGAGGCGGATCT
JMSF026D07+ AAGAGAAAGCATAAAAGAAGAGCAAATCGATGAAGAAAGAAAGCAAAAGGAGGCGGATCT
JMSF026C07+ AAGAGAAAGCATAAAAGAAGAGCAAATCGATGAAGAAAGAAAGCAAAAGGAGGCGGATNT
____________________________________________________________
consensus AAGAGAAAGCATAAAAGAAGAGCAAATCGATGAAGAAAGAAAGCAAAAGGAGGCGGATCT
. : . : . : . : . : . :
JMSF035P16+ GAGAAACGAATAAACCAGGGAACAAAATGGAGAAAATCTATGCAGTAACTAATGCGCCAA
JMSF026D07+ GAGAAACGAATAAACCAGGGAACAAAATGGAGAAAATCTATGCAGTAACTAATGCGCCAA
JMSF026C07+ GAGAAACGAATAAACCAGGGAACAAAATGGAGAAAATCTATGCAGTAACTAATGCGCCAA
____________________________________________________________
consensus GAGAAACGAATAAACCAGGGAACAAAATGGAGAAAATCTATGCAGTAACTAATGCGCCAA
. : . : . : . : . : . :
JMSF035P16+ AGCAATGAGAGA
JMSF026D07+ AGCAATGAGAGATAATCAGGAATCAAGGTACCTTGGGAGACTTAATAAATTCAACAACCA
JMSF026C07+ AGCAATGAGAGATAATCAGGAATCAAGGTACCTTGGGAGACTTAATAAATTCAACAACCA
____________________________________________________________
consensus AGCAATGAGAGATAATCAGGAATCAAGGTACCTTGGGAGACTTAATAAATTCAACAACCA
. : . : . : . : . : . :
JMSF026D07+ CAATAACAGTAACAATAATGTAGTAAAAAAAAGGTAGGAAATGAGAATGTGATAGAATTC
JMSF026C07+ CAATAACAGTAACAATAATGTAGTAAAAAAAAGGTAGGAAATGAGAATGTGATAGAATTC
____________________________________________________________
consensus CAATAACAGTAACAATAATGTAGTAAAAAAAAGGTAGGAAATGAGAATGTGATAGAATTC
. : . : . : . : . : . :
JMSF026D07+ ATACCTCAAGTAAGGAAGATCTGCTATGGGTGAAGAGTGGAGGACGATAAACCC
JMSF026C07+ ATACCTCAAGTAAGGAAGATCTGCTATGGGTGAAGAGTGGAGGACGATAAACCCATGTGC
____________________________________________________________
consensus ATACCTCAAGTAAGGAAGATCTGCTATGGGTGAAGAGTGGAGGACGATAAACCCATGTGC
. : . : . : . : . : . :
JMSF026C07+ GTAACTCCTTCCTTCCTCTAACCACAAATATATCGCACTCCCACCGCTGCAGACGCCGGC
____________________________________________________________
consensus GTAACTCCTTCCTTCCTCTAACCACAAATATATCGCACTCCCACCGCTGCAGACGCCGGC
. : . : . : . : . : . :
JMSF026C07+ CTGTCTTTGCTGCTGCTACCGCCACTGTTCTTCCTCTCCTCCTCTTACTTCCAATCCCCA
____________________________________________________________
consensus CTGTCTTTGCTGCTGCTACCGCCACTGTTCTTCCTCTCCTCCTCTTACTTCCAATCCCCA