Contig 003696:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038A13Sequence480003696 (2)ref|XP_009622782.1|5e-79PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Nicot672011124 (3)ref|XP_004239811.1|1e-74PREDICTED: eukaryotic translation initiation factor 2 subunit 3-like isoform X3
JMSF025P14Sequence679003696 (2)ref|XP_009622782.1|3e-118PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Nicot754011124 (3)ref|XP_004239811.1|1e-108PREDICTED: eukaryotic translation initiation factor 2 subunit 3-like isoform X3

Alignment

This contig is upended


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JMSF025P14+                                                    AGGCGCATAATTCAACAGC
                      ____________________________________________________________
consensus                                                      AGGCGCATAATTCAACAGC
 
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JMSF025P14+           AGNTAAGTGTTCCGAAGTCTGAGGCTGAGGACAGCTCTCATTGGCAGCAATTAGAAGTAA
                      ____________________________________________________________
consensus             AGNTAAGTGTTCCGAAGTCTGAGGCTGAGGACAGCTCTCATTGGCAGCAATTAGAAGTAA
 
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JMSF025P14+           AGCTCCATCCATGATTGCCGCTCCATTAAGCATAGTAGCCATGAGAATATCATGGCCTGG
                      ____________________________________________________________
consensus             AGCTCCATCCATGATTGCCGCTCCATTAAGCATAGTAGCCATGAGAATATCATGGCCTGG
 
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JMFF038A13+                            CATGCCTCAGCAACTTCATCCTGCAGTTCTCAAAACCAGGCAC
JMSF025P14+           GCAATCAACGAATGACACATGCCTCAGCAACTTCATCCTGCAGTTCTCAAAACCAGGCAC
                      ____________________________________________________________
consensus             GCAATCAACGAATGACACATGCCTCAGCAACTTCATCCTGCAGTTCTCAAAACCAGGCAC
 
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JMFF038A13+           ATCGCACATAGGACTATNTTCTTTTCCACTTCCATATGCCTTGTAGCACATAGGTCTAGG
JMSF025P14+           ATCGCACATAGGACTATCTTCTTTTCCACTTCCATATGCCTTGTAGCACATAGGTCTAGG
                      ____________________________________________________________
consensus             ATCGCACATAGGACTATCTTCTTTTCCACTTCCATATGCCTTGTAGCACATAGGTCTAGG
 
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JMFF038A13+           GCAACGGTCCTCTTCACATTTATATATCTTTGCATTGGCATATCCAAGCTTAATTGTAAT
JMSF025P14+           GCAACGGTCCTCTTCACATTTATATATCTTTGCATTGGCATATCCAAGCTTAATTGTAAT
                      ____________________________________________________________
consensus             GCAACGGTCCTCTTCACATTTATATATCTTTGCATTGGCATATCCAAGCTTAATTGTAAT
 
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JMFF038A13+           ATTACGTTCAAGCTCATTTTTAAAACGAACAGTCTGGACACCGGATATGGCTTTTACAAC
JMSF025P14+           ATTACGTTCAAGCTCATTTTTAAAACGAACAGTCTGGACACCGGATATGGCTTTTACAAC
                      ____________________________________________________________
consensus             ATTACGTTCAAGCTCATTTTTAAAACGAACAGTCTGGACACCGGATATGGCTTTTACAAC
 
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JMFF038A13+           TGTTGACTTCCCATGGGCCACATGACCAATGGTGCCAATGTTTATTGTTGCCTGACGAGA
JMSF025P14+           TGTTGACTTCCCATGGGCCACATGACCAATGGTGCCAATGTTTATTGTTGCCTGACGAGA
                      ____________________________________________________________
consensus             TGTTGACTTCCCATGGGCCACATGACCAATGGTGCCAATGTTTATTGTTGCCTGACGAGA
 
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JMFF038A13+           GATCACCTCAGGTGATAGTGGATGTAGCTGTGTTACATCTAACTTACTTAGATCCTGCTC
JMSF025P14+           GATCACCTCAGGTGATAGTGGATGTAGCTGTGTTACATCTAACTTACTTAGATCCTGCTC
                      ____________________________________________________________
consensus             GATCACCTCAGGTGATAGTGGATGTAGCTGTGTTACATCTAACTTACTTAGATCCTGCTC
 
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JMFF038A13+           CATCAATCCTTTTCTAGACATTTTGCTGCCCTTTACTTCAGTATCCACTCAAATTTCAAT
JMSF025P14+           CATCAATCCTTTTCTAGACATTTTGCTGCCCTTTACTTCAGTATCCACTCAAATTTCAAT
                      ____________________________________________________________
consensus             CATCAATCCTTTTCTAGACATTTTGCTGCCCTTTACTTCAGTATCCACTCAAATTTCAAT
 
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JMFF038A13+           CCGGAGAAAAGGCGTTTGCGCCGGCCGTCGAGAGTGCAGTGGGGTTTTCAAGGGTTGAGC
JMSF025P14+           CCGGAGAAAAGGCGTTTGCGCCGGCCGTCGAGAGTGCAGTGGGGTTTTCAAGGGTTGAGC
                      ____________________________________________________________
consensus             CCGGAGAAAAGGCGTTTGCGCCGGCCGTCGAGAGTGCAGTGGGGTTTTCAAGGGTTGAGC
 
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JMFF038A13+           AAAGCGAGAGAGAC                                              
JMSF025P14+           AAAGCGAGAGAGACGACGCAATGAGAGTGGGTCAAGTAGGCCTGTAGCTGAAGGAACACC
                      ____________________________________________________________
consensus             AAAGCGAGAGAGACGACGCAATGAGAGTGGGTCAAGTAGGCCTGTAGCTGAAGGAACACC