Contig 003694:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007L10Sequence446003694 (3)ref|XP_009615892.1|2e-43PREDICTED: N(6)-adenine-specific DNA methyltransferase 2 isoform X2 [Nicotiana 777002875 (4)ref|XP_009758658.1|1e-53PREDICTED: F-box/LRR-repeat protein At5g63520-like, partial [Nicotiana sylvestr
JMSF025J11Sequence704003694 (3)ref|XP_009615891.1|3e-105PREDICTED: N(6)-adenine-specific DNA methyltransferase 2 isoform X1 [Nicotiana 731003694 (3)ref|XP_009615891.1|9e-92PREDICTED: N(6)-adenine-specific DNA methyltransferase 2 isoform X1 [Nicotiana

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J11-                                   ATGTTATGGTTTTAAGCATTCTGAGCTAGTGAAAT
                      ____________________________________________________________
consensus                                      ATGTTATGGTTTTAAGCATTCTGAGCTAGTGAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J11-          GACAAATGGGTCTGTGAATTCAACTAAGTTGATGCTTTGCTGCTTACAACACAACAACAA
                      ____________________________________________________________
consensus             GACAAATGGGTCTGTGAATTCAACTAAGTTGATGCTTTGCTGCTTACAACACAACAACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J11-          GTAATTTTCAAGCACTGATTTGTCAAGAAATGCAAAGCTTGTCTAGAGCTGTAATATGAT
                      ____________________________________________________________
consensus             GTAATTTTCAAGCACTGATTTGTCAAGAAATGCAAAGCTTGTCTAGAGCTGTAATATGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J11-          TGATGCGCTTTGAAATTTTTTCTTTTGCCCTCACAGCTCTATGATCATTCACCCTCCCAA
                      ____________________________________________________________
consensus             TGATGCGCTTTGAAATTTTTTCTTTTGCCCTCACAGCTCTATGATCATTCACCCTCCCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J11-          CCACCAAGTCTCATCCCTGGGTCATAGTTGGTGAACAATCTGAATTCGTTACCAAGTTTG
JMSF025J11+                           CTGGGTCATAGTTGGTGAACAATCTGAATTCGNTACCAAGTTTG
                      ____________________________________________________________
consensus             CCACCAAGTCTCATCCCTGGGTCATAGTTGGTGAACAATCTGAATTCGTTACCAAGTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J11-          CTACTGTGCTGAGGTCTAAACCTGCATGGACGCAAATCCAAGAGCTCTGCCGCCCTATCC
JMSF025J11+           CTACTGTGCTGAGGTCTAAACCTGCATGGACGCAAATCCAAGAGCTCTGCCGCCCTATCC
                      ____________________________________________________________
consensus             CTACTGTGCTGAGGTCTAAACCTGCATGGACGCAAATCCAAGAGCTCTGCCGCCCTATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J11-          TTTTGCACATCACCAGTGAGTAGAAGCAGATATGATTTTCCGGATCTCAAAAGAAAAGAT
JMSF025J11+           TTTTGCACATCACCAGTGAGTAGAAGCAGATATGATTTTCCGGATCTCAAAAGAAAAGAT
                      ____________________________________________________________
consensus             TTTTGCACATCACCAGTGAGTAGAAGCAGATATGATTTTCCGGATCTCAAAAGAAAAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J11-          ATAGTTTCACTAACTTTCTCCAAGCACTCCTGACTCAAATAAGGAGGATCTGCAACAATA
JMSF025J11+           ATAGTTTCACTAACTTTCTCCAAGCACTCCTGACTCAAATAAGGAGGATCTGCAACAATA
                      ____________________________________________________________
consensus             ATAGTTTCACTAACTTTCTCCAAGCACTCCTGACTCAAATAAGGAGGATCTGCAACAATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J11-          ACTGAATATGAATGTTTCAATGATAAGGGGAGATCTTCTGGCTTATTGTAGTCATAGAAT
JMSF007L10+                                            TCTTCTGGCTTATNGTAGTCATAGAAT
JMSF025J11+           ACTGAATATGAATGTTTCAATGATAAGGGGAGATCTTCTGGCTTATTGTAGTCATAGAAT
                      ____________________________________________________________
consensus             ACTGAATATGAATGTTTCAATGATAAGGGGAGATCTTCTGGCTTATTGTAGTCATAGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J11-          GTGAACTCAGTTCCATATGAACTGAACCTCTGGTCATATTCAAGAAGCTGCGCTTTGACA
JMSF007L10+           GTGAACTCAGTTCCATATGAACTGAACCTCTGGTCATATTCAAGAAGCTGCGCTTTGACA
JMSF025J11+           GTGAACTCAGTTCCATATGAACTGAACCTCTGGTCATATTCAAGAAGCTGCGCTTTGACA
                      ____________________________________________________________
consensus             GTGAACTCAGTTCCATATGAACTGAACCTCTGGTCATATTCAAGAAGCTGCGCTTTGACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J11-          TTAGGATCAACTTTCTTGAGGTAGGCGTATAGCGTTGGGCAAGCAATGCAAGCAACTGAC
JMSF007L10+           TTAGGATCAACTTTCTTGAGGTAGGCGTATAGCGTTGGGCAAGCAATGCAAGCAACTGAC
JMSF025J11+           TTAGGATCAACTTTCTTGAGGTAGGCGTATAGCGTTGGGCAAGCAATGCAAGCAACTGAC
                      ____________________________________________________________
consensus             TTAGGATCAACTTTCTTGAGGTAGGCGTATAGCGTTGGGCAAGCAATGCAAGCAACTGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J11-          GGGGACTCAAGAGTCTCGCAAAGAGCGAGGACTTCTCGGGCCACGGTCTCGGCAGTTTCC
JMSF007L10+           GGGGACTCAAGAGTCTCGCAAAGAGCGAGGACTTCTCGGGCCACGGTCTCGGCAGTTTCC
JMSF025J11+           GGGGACTCAAGAGTCTCGCAAAGAGCGAGGACTTCTCGGGCCACGGTCTCGGCAGTTTCC
                      ____________________________________________________________
consensus             GGGGACTCAAGAGTCTCGCAAAGAGCGAGGACTTCTCGGGCCACGGTCTCGGCAGTTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025J11-          CGGTCGTACCAGAACTGGCTGAGCCGCCAATCCTCC                        
JMSF007L10+           CGGTCGTACCAGAACTGGCTGAGCCGCCAATCCTCCGCCACCAACGCCACCTC-TCCTCC
JMSF025J11+           CGGTCGTACCAGAACTGGCTGAGCCGCCAATCCTCCGCCACCAACGCCACCTCTTCCTCC
                      ____________________________________________________________
consensus             CGGTCGTACCAGAACTGGCTGAGCCGCCAATCCTCCGCCACCAACGCCACCTCTTCCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF007L10+           GGCTGCTCCCCCGAAGAAGCTTCAACTACTGTTCGGTTCTGCTCAGCGATGAACTCTCTG
JMSF025J11+           GGCTGCTCCCCCGAAGAAGCTTCAACTACTGTTCGGTTCTGCTCAGCGATGAACTCTCTG
                      ____________________________________________________________
consensus             GGCTGCTCCCCCGAAGAAGCTTCAACTACTGTTCGGTTCTGCTCAGCGATGAACTCTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF007L10+           AGAGCTTCGAGAGCGTGAGAGCTCAGCTGCGGAATATCGTCGTCGTCGTTTTGCTGTAAA
JMSF025J11+           AGAGCTTCGAGAGCGTGAGAGCTCAGCTGCGGAATATCGTCGTCGTCGTTTTGCTGTAAA
                      ____________________________________________________________
consensus             AGAGCTTCGAGAGCGTGAGAGCTCAGCTGCGGAATATCGTCGTCGTCGTTTTGCTGTAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF007L10+           GGGTTAGTCGCTCCCGCCGATTCCATTTTTTGCTTTCTTTGCCCGTTCGGAGAAAATG  
JMSF025J11+           GGGTTAGTCGCTCCCGCCGATTCCATTTTTTGCTTTCTTTGCCCGTTCGGAGAAAATGCC
                      ____________________________________________________________
consensus             GGGTTAGTCGCTCCCGCCGATTCCATTTTTTGCTTTCTTTGCCCGTTCGGAGAAAATGCC