Contig 003692:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF002J04-                                                     AGATTCAGCACACATGT
                      ____________________________________________________________
consensus                                                        AGATTCAGCACACATGT
 
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rJMSF002J04-          ACATGGCCAAAGTTTATGTGTATAATCTACAAACGAAAACCAAAAACTAATGACAGAAAG
                      ____________________________________________________________
consensus             ACATGGCCAAAGTTTATGTGTATAATCTACAAACGAAAACCAAAAACTAATGACAGAAAG
 
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rJMSF002J04-          AATCATCGTACAAGTGTCTGGTATGATGGTGTAATCAAATGTAGGACTGGCGAGAAAATT
                      ____________________________________________________________
consensus             AATCATCGTACAAGTGTCTGGTATGATGGTGTAATCAAATGTAGGACTGGCGAGAAAATT
 
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rJMSF002J04-          TATATCCAGAAATGACAGCCGAAATCGCCATAGCAAGGAATGCCAAGAACTCCATACTTA
                      ____________________________________________________________
consensus             TATATCCAGAAATGACAGCCGAAATCGCCATAGCAAGGAATGCCAAGAACTCCATACTTA
 
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rJMSF002J04-          TAGCTGATGCAGAGGAATCAGTAAATAGGTTGTCATTGTTTTCTCTCATCTTATTTGTCA
                      ____________________________________________________________
consensus             TAGCTGATGCAGAGGAATCAGTAAATAGGTTGTCATTGTTTTCTCTCATCTTATTTGTCA
 
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rJMSF002J04-          GTGGCACTGCAGATGATGCTGAGGATATTAACAAGTATGCTGCCACCTGATCACCAAAAA
JMSF025H02+                                                       ACCTGATCACCAAAAA
                      ____________________________________________________________
consensus             GTGGCACTGCAGATGATGCTGAGGATATTAACAAGTATGCTGCCACCTGATCACCAAAAA
 
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rJMSF002J04-          AGTCTATCATAGCCCAATTTCGTCCGGAAGAGTATATTTTTCCGGTGGAAAGTTCATGGA
JMSF025H02+           AGTCTATCATAGCCCAATTTCGTCCGGAAGAGTATATTTTTCCGGTGGAAAGTTCATGGA
                      ____________________________________________________________
consensus             AGTCTATCATAGCCCAATTTCGTCCGGAAGAGTATATTTTTCCGGTGGAAAGTTCATGGA
 
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rJMSF002J04-          GTTGCCGGAAAGTCTGCAGTCCAGAATACAGAGTAGACAGAATCGATATTGCCAGCACAT
JMSF025H02+           GTTGCCGGAAAGTCTGCAGTCCAGAATACAGAGTAGACAGAATCGATATTGCCAGCACAT
                      ____________________________________________________________
consensus             GTTGCCGGAAAGTCTGCAGTCCAGAATACAGAGTAGACAGAATCGATATTGCCAGCACAT
 
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rJMSF002J04-          ACCT                                                        
JMSF025H02+           ACCTGTATTCCTCGTATCTGTCGAAATCTTTCCAATCCCCATGCTTATTACTAGCCATGA
                      ____________________________________________________________
consensus             ACCTGTATTCCTCGTATCTGTCGAAATCTTTCCAATCCCCATGCTTATTACTAGCCATGA
 
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JMSF025H02+           TGATGAAGGCGAGCAAGGAGAAGAGCAGAGCGGCGGCGCGAGCGCCCAAAGAAGATTTCT
                      ____________________________________________________________
consensus             TGATGAAGGCGAGCAAGGAGAAGAGCAGAGCGGCGGCGCGAGCGCCCAAAGAAGATTTCT
 
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JMSF002J04+             AGCAAATCCTCCNTCTTCCACCGCCGGACGATGTTCCCCACTCCGGTACCCATCCCCG
JMSF025H02+           TGAGCAAATCCTCCCTCTTCCACCGCCGGACGATGTTCCCCACTCCGGTACCCATCCCCG
                      ____________________________________________________________
consensus             TGAGCAAATCCTCCCTCTTCCACCGCCGGACGATGTTCCCCACTCCGGTACCCATCCCCG
 
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JMSF002J04+           CCGCCGTCTGGCTCTCGACATCCCGGGCGCCGGCGCCGGGAGGTGGCGGTATCGGAGCCG
JMSF025H02+           CCGCCGTCTGGCTCTCGACATCCCGGGCGCCGGCGCCGGGAGGTGGCGGTATCGGAGCCG
                      ____________________________________________________________
consensus             CCGCCGTCTGGCTCTCGACATCCCGGGCGCCGGCGCCGGGAGGTGGCGGTATCGGAGCCG
 
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JMSF002J04+           GCACAGTCTCCGCCTCTTTCGCCGAATTATCCATGAGATCCGACATATTCTCCTGGGAAT
JMSF025H02+           GCACAGTCTCCGCCTCTTTCGCCGAATTATCCATGAGATCCGACATATTCTCCTGGGAAT
                      ____________________________________________________________
consensus             GCACAGTCTCCGCCTCTTTCGCCGAATTATCCATGAGATCCGACATATTCTCCTGGGAAT
 
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JMSF002J04+           CAGAGATCTTTGAGTACGGTGAAACAATCGACTAAGAACAAAAATCTCTGCTAAGAAG  
JMSF025H02+           CAGAGATCTTTGAGTACGGTGAAACAATCGACTAAGAACAAAAATCTCTGCTAAGAAGTC
                      ____________________________________________________________
consensus             CAGAGATCTTTGAGTACGGTGAAACAATCGACTAAGAACAAAAATCTCTGCTAAGAAGTC
 
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JMSF025H02+           AAGTGAATAGAAGAATGGAGGGTGGATCGGATATGATGTGGCTTGGAAGGGAGACAATTC
                      ____________________________________________________________
consensus             AAGTGAATAGAAGAATGGAGGGTGGATCGGATATGATGTGGCTTGGAAGGGAGACAATTC