Contig 003687:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN013O05Sequence542003687 (3)ref|XP_006352266.1|164PREDICTED: uncharacterized protein LOC102591569 [Solanum tuberosum]
JMSF024L17Sequence543003687 (3)ref|XP_006352266.1|160PREDICTED: uncharacterized protein LOC102591569 [Solanum tuberosum]484003687 (3)ref|XP_006352266.1|159PREDICTED: uncharacterized protein LOC102591569 [Solanum tuberosum]

Alignment

This contig is upended


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JMFN013O05+                                                            GATGAACAATA
                      ____________________________________________________________
consensus                                                              GATGAACAATA
 
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JMFN013O05+           GATCTATGGCAGATGTTTATAAATAAACTGATTAGAGAACTATTACTCCTCATTCTACAC
JMSF024L17+                 TGGCAGATGTTTATAAATAAACTGATTAGAGAACTATTACTCCTCATTCTACAC
                      ____________________________________________________________
consensus             GATCTATGGCAGATGTTTATAAATAAACTGATTAGAGAACTATTACTCCTCATTCTACAC
 
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JMFN013O05+           TTAGATATATGCTCATGTTTACTGTTTTACAACACACACACACCTATATTGGCGAGAATA
rJMSF024L17-                                   TTTACAACACACNCACACCTATATTGGCGNGAATA
JMSF024L17+           TTAGATATATGCTCATGTTTACTGTTTTACAACACACACACACCTATATTGGCGAGAATA
                      ____________________________________________________________
consensus             TTAGATATATGCTCATGTTTACTGTTTTACAACACACACACACCTATATTGGCGAGAATA
 
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JMFN013O05+           TTTACAAAGACGAGCAAAAAAACAAAGAAAAAGCTCTGAAACCATCATGCTTAGAAAGAA
rJMSF024L17-          TTTACAAAGACGAGCAAAAAAACAAAGAAAAAGCTCTGAAACCATCATGCTTAGAAAGAA
JMSF024L17+           TTTACAAAGACGAGCAAAAAAACAAAGAAAAAGCTCTGAAACCATCATGCTTAGAAAGAA
                      ____________________________________________________________
consensus             TTTACAAAGACGAGCAAAAAAACAAAGAAAAAGCTCTGAAACCATCATGCTTAGAAAGAA
 
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JMFN013O05+           GGGTCTGAATTGGAAGACCTGGGAAGCTTAGATCCATGCTCTGGTGCGAGATTTTCAGAA
rJMSF024L17-          GGGTCTGAATTGGAAGACCTGGGAAGCTTANATCCATGCTCTGGTGCGAGATTTTCAGAA
JMSF024L17+           GGGTCTGAATTGGAAGACCTGGGAAGCTTAGATCCATGCTCTGGTGCGAGATTTTCAGAA
                      ____________________________________________________________
consensus             GGGTCTGAATTGGAAGACCTGGGAAGCTTAGATCCATGCTCTGGTGCGAGATTTTCAGAA
 
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JMFN013O05+           GCAGCCCGTTTCGGTCTCAGCTTCTCGTCAGCATGCTGGTACAAGTGTCTTACAAGTATA
rJMSF024L17-          GCAGCCCGTTTCGGTCTCAGCTTCTCGTCAGCATGCTGGTACAAGTGTCTTACAAGTGTA
JMSF024L17+           GCAGCCCGTTTCGGTCTCAGCTTCTCGTCAGCATGCTGGTACAAGTGTCTTACAAGTGTA
                      ____________________________________________________________
consensus             GCAGCCCGTTTCGGTCTCAGCTTCTCGTCAGCATGCTGGTACAAGTGTCTTACAAGTGTA
 
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JMFN013O05+           TTTTTTGCTTCGGAACAAATAACTTGATTGGGCGGTGGGAGAGTTCGATCATGGGTAGGA
rJMSF024L17-          TTTTTTGCTTCGGAACAAATAACTTGATTGGGCGGTGGGAGAGTTCGATCATGGGTAGGA
JMSF024L17+           TTTTTTGCTTCGGAACAAATAACTTGATTGGGCGGTGGGAGAGTTCGATCATGGGTAGGA
                      ____________________________________________________________
consensus             TTTTTTGCTTCGGAACAAATAACTTGATTGGGCGGTGGGAGAGTTCGATCATGGGTAGGA
 
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JMFN013O05+           CGGTAAGTTACTGGTGTCATTCTGGAAGGGGCAGAGGGATCAGAGGGTCGGAGCTGGCTG
rJMSF024L17-          CGGTAAGTTACTGGTGTCATTCTGGAAGGGGCAGAGGGATCANAGGGTCGGAGCTGGCTG
JMSF024L17+           CGGTAAGTTACTGGTGTCATTCTGGAAGGGGCAGAGGGATCAGAGGGTCGGAGCTGGCTG
                      ____________________________________________________________
consensus             CGGTAAGTTACTGGTGTCATTCTGGAAGGGGCAGAGGGATCAGAGGGTCGGAGCTGGCTG
 
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JMFN013O05+           AAGTTGTGAGGGTCAAAGGACGGCCAGTCACCGAACACTGAACCCATGGATCGAGCAATG
rJMSF024L17-          AAGTTGTGAGGGTCAAAAGACGGCCAGTCACCGAACACTGAACCCATGGATCGAGCANTG
JMSF024L17+           AAGTTGTGAGTGTCAAAAGACGGCCAGTCACCGAACACTGAACCCATGGATCGAGCAATG
                      ____________________________________________________________
consensus             AAGTTGTGAGGGTCAAAAGACGGCCAGTCACCGAACACTGAACCCATGGATCGAGCAATG
 
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JMFN013O05+           CCGGACCACGCCGATATGGATGGAAGAATCGAGAGAAGAATGGCGTTTCAG         
rJMSF024L17-          CCGGACCACGCCGATATGGATGGAAGAATCGAGAGAAGAATGGCGTTTCAGAATATGGCC
JMSF024L17+           CCGGACCACGCCGATATGGATGGAAGAATCGAGAGAAGAATGGCGTTTCAGAATATGGCC
                      ____________________________________________________________
consensus             CCGGACCACGCCGATATGGATGGAAGAATCGAGAGAAGAATGGCGTTTCAGAATATGGCC