clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF012N02 | Sequence | 244 | 003684 (4) | 706 | 002860 (4) | ref|XP_006345419.1| | 4e-114 | PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum] | |||
JMSF024I03 | Sequence | 677 | 003684 (4) | ref|XP_006345419.1| | 3e-92 | PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum] | 690 | 002860 (4) | ref|XP_006345419.1| | 3e-95 | PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum] |
JMSF040I23 | Sequence | 611 | 003684 (4) | ref|XP_010324687.1| | 4e-75 | PREDICTED: alpha-N-acetylglucosaminidase isoform X1 [Solanum lycopersicum] | 844 | 002860 (4) | ref|XP_006345419.1| | 7e-126 | PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum] |
JMSF052B19 | Sequence | 616 | 003684 (4) | ref|XP_006345419.1| | 7e-76 | PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum] | 881 | 002860 (4) | ref|XP_009611357.1| | 6e-149 | PREDICTED: LOW QUALITY PROTEIN: alpha-N-acetylglucosaminidase [Nicotiana toment |
This contig is upended
. : . : . : . : . : . :
JMSF024I03+ GGTAAATGCTAGGGGCA
____________________________________________________________
consensus GGTAAATGCTAGGGGCA
. : . : . : . : . : . :
JMSF052B19+ CCAATCCCACC
JMSF040I23+ CCAATCCCACC
JMSF024I03+ GATTAATTCCTTGGAGCGCCATCCAGTCTATCTCTTTCTCCCATCTCTGCCAATCCCACC
____________________________________________________________
consensus GATTAATTCCTTGGAGCGCCATCCAGTCTATCTCTTTCTCCCATCTCTGCCAATCCCACC
. : . : . : . : . : . :
JMSF052B19+ ATACATAGGAATAGCTAGAAGTGACAACATTTTGGTAGTAGTTCCATGGCACAGGCCGTT
JMSF040I23+ ATACATAGGAATAGCTAGAAGTGACAACATTTTGGTAGTAGTTCCATGGCACAGGCCGTT
JMSF024I03+ ATACATAGGAATAGCTAGAAGTGACAACATTTTGGTAGTAGTTCCATGGCACAGGCCGTT
____________________________________________________________
consensus ATACATAGGAATAGCTAGAAGTGACAACATTTTGGTAGTAGTTCCATGGCACAGGCCGTT
. : . : . : . : . : . :
JMSF052B19+ GAATCATCACACCCTCTGTACTTACAGAAGGTAGTAATCCTGGCTTGGGAACTGAATTTA
JMSF040I23+ GAATCATCACACCCTCTGTACTTACAGAAGGTAGTAATCCTGGCTTGGGAACTGAATTTA
JMSF024I03+ GAATCATCACACCCTCTGTACTTACAGAAGGTAGTAATCCTGGCTTGGGAACTGAATTTA
____________________________________________________________
consensus GAATCATCACACCCTCTGTACTTACAGAAGGTAGTAATCCTGGCTTGGGAACTGAATTTA
. : . : . : . : . : . :
JMSF052B19+ TTTGTATGCCCCCAGTCTTTTCCCATGAAATGTGAGCACCACACCAATACTTTAAGTACC
JMSF040I23+ TTTGTATGCCCCCAGTCTTTTCCCATGAAATGTGAGCACCACACCAATACTTTAAGTACC
JMSF024I03+ TTTGTATGCCCCCAGTCTTTTCCCATGAAATGTGAGCACCACACCAATACTTTAAGTACC
____________________________________________________________
consensus TTTGTATGCCCCCAGTCTTTTCCCATGAAATGTGAGCACCACACCAATACTTTAAGTACC
. : . : . : . : . : . :
JMSF052B19+ AATGGAGGCCTGATGTGATTTCAATTGCTGTAGTTCCTTGTATCAGTATCTGAGGTGAAT
JMSF040I23+ AATGGAGGCCTGATGTGATTTCAATTGCTGTAGTTCCTTGTATCAGTATCTGAGGTGAAT
JMSF024I03+ AATGGAGGCCTGATGTGATTTCAATTGCTGTAGTTCCTTGTATCAGTATCTGAGGTGAAT
____________________________________________________________
consensus AATGGAGGCCTGATGTGATTTCAATTGCTGTAGTTCCTTGTATCAGTATCTGAGGTGAAT
. : . : . : . : . : . :
JMSF052B19+ CTCCACTTGAGCTCTTGAAATTGGTTACTCTAAAGCAGCTTTGCCCACCACAAACATCCT
JMSF040I23+ CTCCACTTGAGCTCTTGAAATTGGTTACTCTAAAGCAGCTTTGCCCACCACAAACATCCT
JMSF024I03+ CTCCACTTGAGCTCTTGAAATTGGTTACTCTAAAGCAGCTTTGCCCACCACAAACATCCT
____________________________________________________________
consensus CTCCACTTGAGCTCTTGAAATTGGTTACTCTAAAGCAGCTTTGCCCACCACAAACATCCT
. : . : . : . : . : . :
JMSF052B19+ TGGACACAATTTTGAGCTCAAAACTTGACAAATGGGTGGGAAGGAGCCTTTGAAGGACAC
JMSF040I23+ TGGACACAATTTTGAGCTCAAAACTTGACAAATGGGTGGGAAGGAGCCTTTGAAGGACAC
JMSF012N02+ AGGACAC
JMSF024I03+ TGGACACAATTTTGAGCTCAAAACTTGACAAATGGGTGGGAAGGAGCCTTTGAAGGACAC
____________________________________________________________
consensus TGGACACAATTTTGAGCTCAAAACTTGACAAATGGGTGGGAAGGAGCCTTTGAAGGACAC
. : . : . : . : . : . :
JMSF052B19+ CCTTGGCTGCAGATTCTTGGACTGAATTTGATGGTCTTTTGCTGTCCAGACGGCTTAGCA
JMSF040I23+ CCTTGGCTGCAGATTCTTGGACTGAATTTGATGGTCTTTTGCTGTCCAGACGGCTTAGCA
JMSF012N02+ CCTTGGCTGCAGATTCTTGGACTGAATTTGATGGTCTTTTGCTGTCCAGACGGCTTAGCA
JMSF024I03+ CCTTGGCTGCAGATTCTTGGACTGAATTTGATGGTCTTTTGCTGTCCAGACGGCTTAGCA
____________________________________________________________
consensus CCTTGGCTGCAGATTCTTGGACTGAATTTGATGGTCTTTTGCTGTCCAGACGGCTTAGCA
. : . : . : . : . : . :
JMSF052B19+ GGGACTCTATAGCTTCTGATTCTTGCACTGATAGTGAGGATGATGAACATAGAAGCAAAA
JMSF040I23+ GGGACTCTATAGCTTCTGATTCTTGCACTGATAGTGAGGATGATGAACATAGAAGCAAAA
JMSF012N02+ GGGACTCTATAGCTTCTGATTCTTGCACTGATAGTGAGGATGATGAACATAGAAGCAAAA
JMSF024I03+ GGGACTCTATAGCTTCTGATTCTTGCACTGATAGTGAGGATGATGAACATAGAAGCAAAA
____________________________________________________________
consensus GGGACTCTATAGCTTCTGATTCTTGCACTGATAGTGAGGATGATGAACATAGAAGCAAAA
. : . : . : . : . : . :
JMSF052B19+ TAAGAATCAGAAACGCAAAGAAATAATTGAAATCACACCCCATATTCCAGTTTAAGTTTG
JMSF040I23+ TAAGAATCAGAAACGCAAAGAAATAATTGAAATCACACCCCATATTCCAGTTTAAGTTTG
JMSF012N02+ TAAGAATCAGAAACGCAAAGAAATAATTGAAATCACACCCCATATTCCAGTTTAAGTTTG
JMSF024I03+ TAAGAATCAGAAACGCAAAGAAATAATTGAAATCACACCCCATATTCCAGTTTAAGTTTG
____________________________________________________________
consensus TAAGAATCAGAAACGCAAAGAAATAATTGAAATCACACCCCATATTCCAGTTTAAGTTTG
. : . : . : . : . : . :
JMSF052B19+ GATTCCTCATCCTCTGAGGAAAGTATTGTGTGTTTTTGCTGATTCTCTAGCTCTC
JMSF040I23+ GATTCCTCATCCTCTGAGGAAAGTATTGTGTGTTTTTGCTGATTCTCTAGCTCTC
JMSF012N02+ GATTCCTCATCCTCTGAGGAAAGTATTGTGTGTTTTTGCTGATTCTCTAGCTCTC
JMSF024I03+ GATTCCTCATCCTCTGAGGAAAGTATTGTGTGTTTTTGCTGATTCTCTAGCTCTCCACTC
____________________________________________________________
consensus GATTCCTCATCCTCTGAGGAAAGTATTGTGTGTTTTTGCTGATTCTCTAGCTCTCCACTC