Contig 003683:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024H05Sequence648003683 (2)766004333 (4)ref|XP_009780141.1|2e-102PREDICTED: U3 small nucleolar RNA-associated protein 25 [Nicotiana sylvestris]
JMSF038C19Sequence670003683 (2)890004333 (4)ref|XP_009780141.1|5e-120PREDICTED: U3 small nucleolar RNA-associated protein 25 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF038C19+ TTCCAAAAGCTTGTTAGCCTCTTCTTNAGATAGCTTGTAGTTCAAATGATTGTGAAAAGT
                      ____________________________________________________________
consensus TTCCAAAAGCTTGTTAGCCTCTTCTTNAGATAGCTTGTAGTTCAAATGATTGTGAAAAGT
 
. : . : . : . : . : . :
JMSF038C19+ GCTNGTGTTTATTGATGGCTCCTCAACAGGCTGATCATTTACTCTCACATCATATTCTTC
                      ____________________________________________________________
consensus GCTNGTGTTTATTGATGGCTCCTCAACAGGCTGATCATTTACTCTCACATCATATTCTTC
 
. : . : . : . : . : . :
JMSF038C19+ ATCTGTATCTGAGGCCTCAGAATCAGCATCAACTCCCAAATCAGATTCTCGGTGGTCATC
JMSF024H05+ GGCCTCAGAATCAGCATCAACTCCCAAATCAGATTCTCGGTGGTCATC
                      ____________________________________________________________
consensus ATCTGTATCTGAGGCCTCAGAATCAGCATCAACTCCCAAATCAGATTCTCGGTGGTCATC
 
. : . : . : . : . : . :
JMSF038C19+ TCCGACATCACTAGGTCCCGAAGACTCGCTTTCACACTCTTCTCCAGATCCATCACCTGA
JMSF024H05+ TCCGACATCACTAGGTCCCGAAGACTCGCTTTCACACTCTTCTCCAGATCCATCACCTGA
                      ____________________________________________________________
consensus TCCGACATCACTAGGTCCCGAAGACTCGCTTTCACACTCTTCTCCAGATCCATCACCTGA
 
. : . : . : . : . : . :
JMSF038C19+ TTCCAGATCATCATCTAATTCGTCTTCTGAGTTAGTTGAAACCGCTTCTTTTTGCCTCAA
JMSF024H05+ TTCCAGATCATCATCTAATTCGTCTTCTGAGTTAGTTGAAACCGCTTCTTTTTGCCTCAA
                      ____________________________________________________________
consensus TTCCAGATCATCATCTAATTCGTCTTCTGAGTTAGTTGAAACCGCTTCTTTTTGCCTCAA
 
. : . : . : . : . : . :
JMSF038C19+ TGACCGCAACAGGTTTTCATACATTGTGGGCTCTCTATAACTCACTATTTCTTCTTTTTC
JMSF024H05+ TGACCGCAACAGGTTTTCATACATTGTGGGCTCTCTATAACTCACTATTTCTTCTTTTTC
                      ____________________________________________________________
consensus TGACCGCAACAGGTTTTCATACATTGTGGGCTCTCTATAACTCACTATTTCTTCTTTTTC
 
. : . : . : . : . : . :
JMSF038C19+ ATCCGAAATTCCTGATTCTTCCTCTATGTTCTCATCCGATGAATCATCTGAAGCACTTGA
JMSF024H05+ ATCCGAAATTCCTGATTCTTCCTCTATGTTCTCATCCGATGAATCATCTGAAGCACTTGA
                      ____________________________________________________________
consensus ATCCGAAATTCCTGATTCTTCCTCTATGTTCTCATCCGATGAATCATCTGAAGCACTTGA
 
. : . : . : . : . : . :
JMSF038C19+ CAATGGACTTTCTTCAATTTTTTCATCTTTGGCACGGCGCTTGTTCTTCCGAAAGGGCTC
JMSF024H05+ CAATGGACTTTCTTCAATTTTTTCATCTTTGGCACGGCGCTTGTTCTTCCGAAAGGGCTC
                      ____________________________________________________________
consensus CAATGGACTTTCTTCAATTTTTTCATCTTTGGCACGGCGCTTGTTCTTCCGAAAGGGCTC
 
. : . : . : . : . : . :
JMSF038C19+ TTGATTTTTTCGTCTCTTTCCACCTGTCTTTCTGGTAAACCGTTGTTTCCCCATATTTGA
JMSF024H05+ TTGATTTTTTCGTCTCTTTCCACCTGTCTTTCTGGTAAACCGTTGTTTCCCCATATTTGA
                      ____________________________________________________________
consensus TTGATTTTTTCGTCTCTTTCCACCTGTCTTTCTGGTAAACCGTTGTTTCCCCATATTTGA
 
. : . : . : . : . : . :
JMSF038C19+ AACTGAAATTACGGCTCACACAAGCAGCAACCAAGAGTTGTATCAACTGCTTTGTGATGG
JMSF024H05+ AACTGAAATTACGGCTCACACAAGCAGCAACCAAGAGTTGTATCAACTGCTTTGTGATGG
                      ____________________________________________________________
consensus AACTGAAATTACGGCTCACACAAGCAGCAACCAAGAGTTGTATCAACTGCTTTGTGATGG
 
. : . : . : . : . : . :
JMSF038C19+ GGGAGACAATTGAGGCTTCCGGCAGCT
JMSF024H05+ GGGAGACAATTGAGGCTTCCGGCAGCTCAGGAGGAGCTGTGGTCGTCTATTTCGCGACAA
                      ____________________________________________________________
consensus GGGAGACAATTGAGGCTTCCGGCAGCTCAGGAGGAGCTGTGGTCGTCTATTTCGCGACAA
 
. : . : . : . : . : . :
JMSF024H05+ AGTGTAGAGCGAAGAAGGAGATATCGAAGACAGAGGAAGGAGGCTTGGACTGAGCTGGGC
                      ____________________________________________________________
consensus AGTGTAGAGCGAAGAAGGAGATATCGAAGACAGAGGAAGGAGGCTTGGACTGAGCTGGGC
 
. : . : . : . : . : . :
JMSF024H05+ GGTTGGCGGCGGGGGCGGCGGTGGAGCAGAGCCGTGGAGAGCAGGGGAGTGTGGGCCGTC
                      ____________________________________________________________
consensus GGTTGGCGGCGGGGGCGGCGGTGGAGCAGAGCCGTGGAGAGCAGGGGAGTGTGGGCCGTC