Contig 003679:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031K08Sequence554003679 (2)ref|XP_004237937.1|1e-24PREDICTED: formin-like protein 3 [Solanum lycopersicum]675005687 (2)ref|XP_006363283.1|1e-12PREDICTED: bromodomain-containing protein 4-like [Solanum tuberosum]
JMSF024C20Sequence679003679 (2)ref|XP_004237937.1|4e-26PREDICTED: formin-like protein 3 [Solanum lycopersicum]758005687 (2)ref|XP_006363283.1|2e-11PREDICTED: bromodomain-containing protein 4-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF024C20+ GCGGAAATCGGGGACTCCG
                      ____________________________________________________________
consensus GCGGAAATCGGGGACTCCG
 
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JMSF024C20+ CCGNCCCCATGAACCGCCGGAAACGGCGGTAAGGGGGAGGGAGGCTGAGCTTGAACGTGG
                      ____________________________________________________________
consensus CCGNCCCCATGAACCGCCGGAAACGGCGGTAAGGGGGAGGGAGGCTGAGCTTGAACGTGG
 
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JMSF024C20+ CGCTGATCGCCGATAAACCCTCCACCACCCAGCATCTGATTGGTGGGGAGCGGCTGAAGA
                      ____________________________________________________________
consensus CGCTGATCGCCGATAAACCCTCCACCACCCAGCATCTGATTGGTGGGGAGCGGCTGAAGA
 
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JMFF031K08+ AGCGGC
JMSF024C20+ GGAGGGCCGCCGACAACGTTCATCAGCTGCGGCGGCCGGTTACCGATTTGCGCGAGCGGC
                      ____________________________________________________________
consensus GGAGGGCCGCCGACAACGTTCATCAGCTGCGGCGGCCGGTTACCGATTTGCGCGAGCGGC
 
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JMFF031K08+ GGCGGGCGAATCCTCTGCAGCCTCGAACTGGGCGGCTTGGGCTGGTGAATGGGCGGCGGA
JMSF024C20+ GGCGGGCGAATCCTCTGCAGCCTCGAACTGGGCGGCTTGGGCTGGTGAATGGGCGGCGGA
                      ____________________________________________________________
consensus GGCGGGCGAATCCTCTGCAGCCTCGAACTGGGCGGCTTGGGCTGGTGAATGGGCGGCGGA
 
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JMFF031K08+ GTAGCCATCCGCTCATGCGCCGGAGATCCGGTGAGCTTCTGAACCACATCGCGAAAATCA
JMSF024C20+ GTAGCCATCCGCTCATGCGCCGGAGATCCGGTGAGCTTCTGAACCACATCGCGAAAATCA
                      ____________________________________________________________
consensus GTAGCCATCCGCTCATGCGCCGGAGATCCGGTGAGCTTCTGAACCACATCGCGAAAATCA
 
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JMFF031K08+ CTCTTGTTTATATTATAAACCGGAGGCTGCTGCTGCGGCGCCGCCGCCGCCGCAGCAGGC
JMSF024C20+ CTCTTGTTTATATTATAAACCGGAGGCTGCTGCTGCGGCGCCGCCGCCGCCGCAGCAGGC
                      ____________________________________________________________
consensus CTCTTGTTTATATTATAAACCGGAGGCTGCTGCTGCGGCGCCGCCGCCGCCGCAGCAGGC
 
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JMFF031K08+ GGCTGAGCCTGGACATCATTAACTATCTGAGAACTGAGAAGACTCTGATTCTCATACACC
JMSF024C20+ GGCTGAGCCTGGACATCATTAACTATCTGAGAACTGAGAAGACTCTGATTCTCATACACC
                      ____________________________________________________________
consensus GGCTGAGCCTGGACATCATTAACTATCTGAGAACTGAGAAGACTCTGATTCTCATACACC
 
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JMFF031K08+ GGTGGCCTCCGAACAGGCTTAGAAATCTTATGAGAAATCTTGCTAAGATTCTTCAAGATA
JMSF024C20+ GGTGGCCTCCGAACAGGCTTAGAAATCTTATGAGAAATCTTGCTAAGATTCTTCAAGATA
                      ____________________________________________________________
consensus GGTGGCCTCCGAACAGGCTTAGAAATCTTATGAGAAATCTTGCTAAGATTCTTCAAGATA
 
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JMFF031K08+ GTATCGCTTCCGCCATTATTATTACCGCTTGAAGCAGATAGAGTAGTGGAGGAAGAATCA
JMSF024C20+ GTATCGCTTCCGCCATTATTATTACCGCTTGAAGCAGATAGAGTAGTGGAGGAAGAATCA
                      ____________________________________________________________
consensus GTATCGCTTCCGCCATTATTATTACCGCTTGAAGCAGATAGAGTAGTGGAGGAAGAATCA
 
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JMFF031K08+ GCACCGCTCCCTGAAGAATGAGAACCTCTATCCATCAACCGCCACACAAATAACACACCT
JMSF024C20+ GCACCGCTCCCTGAAGAATGAGAACCTCTATCCATCAACCGCCACACAAATAACACACCT
                      ____________________________________________________________
consensus GCACCGCTCCCTGAAGAATGAGAACCTCTATCCATCAACCGCCACACAAATAACACACCT
 
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JMFF031K08+ CTTCTCCTTCTTCTTCTTTCTCTTTCTAGATATCTTTACCTCTCTCTCTCTAT
JMSF024C20+ CTTCTCCTTCTTCTTCTTTCTCTTTCTAGATATCTTTACCTCTCTCTCTCTATAATTGTC
                      ____________________________________________________________
consensus CTTCTCCTTCTTCTTCTTTCTCTTTCTAGATATCTTTACCTCTCTCTCTCTATAATTGTC