Contig 003679:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031K08Sequence554003679 (2)ref|XP_004237937.1|1e-24PREDICTED: formin-like protein 3 [Solanum lycopersicum]675005687 (2)ref|XP_006363283.1|1e-12PREDICTED: bromodomain-containing protein 4-like [Solanum tuberosum]
JMSF024C20Sequence679003679 (2)ref|XP_004237937.1|4e-26PREDICTED: formin-like protein 3 [Solanum lycopersicum]758005687 (2)ref|XP_006363283.1|2e-11PREDICTED: bromodomain-containing protein 4-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF024C20+                                                    GCGGAAATCGGGGACTCCG
                      ____________________________________________________________
consensus                                                      GCGGAAATCGGGGACTCCG
 
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JMSF024C20+           CCGNCCCCATGAACCGCCGGAAACGGCGGTAAGGGGGAGGGAGGCTGAGCTTGAACGTGG
                      ____________________________________________________________
consensus             CCGNCCCCATGAACCGCCGGAAACGGCGGTAAGGGGGAGGGAGGCTGAGCTTGAACGTGG
 
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JMSF024C20+           CGCTGATCGCCGATAAACCCTCCACCACCCAGCATCTGATTGGTGGGGAGCGGCTGAAGA
                      ____________________________________________________________
consensus             CGCTGATCGCCGATAAACCCTCCACCACCCAGCATCTGATTGGTGGGGAGCGGCTGAAGA
 
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JMFF031K08+                                                                 AGCGGC
JMSF024C20+           GGAGGGCCGCCGACAACGTTCATCAGCTGCGGCGGCCGGTTACCGATTTGCGCGAGCGGC
                      ____________________________________________________________
consensus             GGAGGGCCGCCGACAACGTTCATCAGCTGCGGCGGCCGGTTACCGATTTGCGCGAGCGGC
 
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JMFF031K08+           GGCGGGCGAATCCTCTGCAGCCTCGAACTGGGCGGCTTGGGCTGGTGAATGGGCGGCGGA
JMSF024C20+           GGCGGGCGAATCCTCTGCAGCCTCGAACTGGGCGGCTTGGGCTGGTGAATGGGCGGCGGA
                      ____________________________________________________________
consensus             GGCGGGCGAATCCTCTGCAGCCTCGAACTGGGCGGCTTGGGCTGGTGAATGGGCGGCGGA
 
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JMFF031K08+           GTAGCCATCCGCTCATGCGCCGGAGATCCGGTGAGCTTCTGAACCACATCGCGAAAATCA
JMSF024C20+           GTAGCCATCCGCTCATGCGCCGGAGATCCGGTGAGCTTCTGAACCACATCGCGAAAATCA
                      ____________________________________________________________
consensus             GTAGCCATCCGCTCATGCGCCGGAGATCCGGTGAGCTTCTGAACCACATCGCGAAAATCA
 
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JMFF031K08+           CTCTTGTTTATATTATAAACCGGAGGCTGCTGCTGCGGCGCCGCCGCCGCCGCAGCAGGC
JMSF024C20+           CTCTTGTTTATATTATAAACCGGAGGCTGCTGCTGCGGCGCCGCCGCCGCCGCAGCAGGC
                      ____________________________________________________________
consensus             CTCTTGTTTATATTATAAACCGGAGGCTGCTGCTGCGGCGCCGCCGCCGCCGCAGCAGGC
 
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JMFF031K08+           GGCTGAGCCTGGACATCATTAACTATCTGAGAACTGAGAAGACTCTGATTCTCATACACC
JMSF024C20+           GGCTGAGCCTGGACATCATTAACTATCTGAGAACTGAGAAGACTCTGATTCTCATACACC
                      ____________________________________________________________
consensus             GGCTGAGCCTGGACATCATTAACTATCTGAGAACTGAGAAGACTCTGATTCTCATACACC
 
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JMFF031K08+           GGTGGCCTCCGAACAGGCTTAGAAATCTTATGAGAAATCTTGCTAAGATTCTTCAAGATA
JMSF024C20+           GGTGGCCTCCGAACAGGCTTAGAAATCTTATGAGAAATCTTGCTAAGATTCTTCAAGATA
                      ____________________________________________________________
consensus             GGTGGCCTCCGAACAGGCTTAGAAATCTTATGAGAAATCTTGCTAAGATTCTTCAAGATA
 
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JMFF031K08+           GTATCGCTTCCGCCATTATTATTACCGCTTGAAGCAGATAGAGTAGTGGAGGAAGAATCA
JMSF024C20+           GTATCGCTTCCGCCATTATTATTACCGCTTGAAGCAGATAGAGTAGTGGAGGAAGAATCA
                      ____________________________________________________________
consensus             GTATCGCTTCCGCCATTATTATTACCGCTTGAAGCAGATAGAGTAGTGGAGGAAGAATCA
 
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JMFF031K08+           GCACCGCTCCCTGAAGAATGAGAACCTCTATCCATCAACCGCCACACAAATAACACACCT
JMSF024C20+           GCACCGCTCCCTGAAGAATGAGAACCTCTATCCATCAACCGCCACACAAATAACACACCT
                      ____________________________________________________________
consensus             GCACCGCTCCCTGAAGAATGAGAACCTCTATCCATCAACCGCCACACAAATAACACACCT
 
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JMFF031K08+           CTTCTCCTTCTTCTTCTTTCTCTTTCTAGATATCTTTACCTCTCTCTCTCTAT       
JMSF024C20+           CTTCTCCTTCTTCTTCTTTCTCTTTCTAGATATCTTTACCTCTCTCTCTCTATAATTGTC
                      ____________________________________________________________
consensus             CTTCTCCTTCTTCTTCTTTCTCTTTCTAGATATCTTTACCTCTCTCTCTCTATAATTGTC