Contig 003675:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN004I12Sequence599003675 (2)ref|XP_011080408.1|302PREDICTED: uncharacterized protein LOC105163666 [Sesamum indicum]
JMSF023N09Sequence661003675 (2)ref|XP_011080408.1|331PREDICTED: uncharacterized protein LOC105163666 [Sesamum indicum]599022539ref|XP_002526039.1|2e-46conserved hypothetical protein [Ricinus communis] gb|EEF36316.1| conserved hypot

Alignment

This contig is upended


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JMSF023N09+                                                                      T
                      ____________________________________________________________
consensus                                                                        T
 
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JMFN004I12+                                                           ATCGACATTAGA
JMSF023N09+           TTGCTCCAGAATTGACTTCTTGATTATTACTGGAGAATTGCCAATTGGATCGACATTAGA
                      ____________________________________________________________
consensus             TTGCTCCAGAATTGACTTCTTGATTATTACTGGAGAATTGCCAATTGGATCGACATTAGA
 
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JMFN004I12+           TACAGGACCTTTCTCCTGTGGGTAATATTTTCTTATGATTTTCTCATTCTCAGTGGGTTT
JMSF023N09+           TACAGGACCTTTCTCCTGTGGGTAATATTTTCTTATGATTTTCTCATTCTCAGTGGGTTT
                      ____________________________________________________________
consensus             TACAGGACCTTTCTCCTGTGGGTAATATTTTCTTATGATTTTCTCATTCTCAGTGGGTTT
 
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JMFN004I12+           GATGTAGAAAAAAGGGAATGCCGCTGGATTCCCTCCTACAGCCAAATTTGGCAAAGGATT
JMSF023N09+           GATGTAGAAAAAAGGGAATGCCGCTGGATTCCCTCCTACAGCCAAATTTGGCAAAGGATT
                      ____________________________________________________________
consensus             GATGTAGAAAAAAGGGAATGCCGCTGGATTCCCTCCTACAGCCAAATTTGGCAAAGGATT
 
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JMFN004I12+           TACAAATATGTGATCAGGTTCTGCCATTAGAATGTATTCTTCCTCAATCGCTGCTTTCTC
JMSF023N09+           TACAAATATGTGATCAGGTTCTGCCATTAGAATGTATTCTTCCTCAATCGCTGCTTTCTC
                      ____________________________________________________________
consensus             TACAAATATGTGATCAGGTTCTGCCATTAGAATGTATTCTTCCTCAATCGCTGCTTTCTC
 
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JMFN004I12+           CAGGAATTGCACAAATGCCCAGGGCCGGTTTAAGACAACGTAATCCCTGTCGAGGCCGTG
JMSF023N09+           CAGGAATTGCACAAATGCCCAGGGCCGGTTTAAGACAACGTAATCCCTGTCGAGGCCGTG
                      ____________________________________________________________
consensus             CAGGAATTGCACAAATGCCCAGGGCCGGTTTAAGACAACGTAATCCCTGTCGAGGCCGTG
 
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JMFN004I12+           AGGGAGGGGATCAACGACGAAAGTAGGGATCTCGTCCATAAGATCATCGGGGCGGCCCGA
JMSF023N09+           AGGGAGGGGATCAACGACGAAAGTAGGGATCTCGTCCATAAGATCATCGGGGCGGCCCGA
                      ____________________________________________________________
consensus             AGGGAGGGGATCAACGACGAAAGTAGGGATCTCGTCCATAAGATCATCGGGGCGGCCCGA
 
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JMFN004I12+           ATGCAAGACACGGGTGAAGCCGCCCATGTCGGACCCGGGAGCGTCCTTCATCTTCTTGTA
JMSF023N09+           ATGCAAGACACGGGTGAAGCCGCCCATGTCGGACCCGGGAGCGTCCTTCATCTTCTTGTA
                      ____________________________________________________________
consensus             ATGCAAGACACGGGTGAAGCCGCCCATGTCGGACCCGGGAGCGTCCTTCATCTTCTTGTA
 
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JMFN004I12+           CCAGTAGTACATGATCCGGCACTGCCACTTGCTGTAGGGCGCATCGGTCGCCGTGAGAAC
JMSF023N09+           CCAGTAGTACATGATCCGGCACTGCCACTTGCTGTAGGGCGCATCGGTCGCCGTGAGAAC
                      ____________________________________________________________
consensus             CCAGTAGTACATGATCCGGCACTGCCACTTGCTGTAGGGCGCATCGGTCGCCGTGAGAAC
 
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JMFN004I12+           GACGTGAAATTTCCGATTGCCGCCGCCGCTGCGGTAGTGGAGGAGTGGAATTAATAGATT
JMSF023N09+           GACGTGAAATTTCCGATTGCCGCCGCCGCTGCGGTAGTGGAGGAGTGGAATTAATAGATT
                      ____________________________________________________________
consensus             GACGTGAAATTTCCGATTGCCGCCGCCGCTGCGGTAGTGGAGGAGTGGAATTAATAGATT
 
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JMFN004I12+           GTAAGTGGCCAAGAAGGAACACAATGCTATCAATATCAGCACAAACGGCGATACCGATTG
JMSF023N09+           GTAAGTGGCCAAGAAGGAACACAATGCTATCAATATCAGCACAAACGGCGATACCGATTG
                      ____________________________________________________________
consensus             GTAAGTGGCCAAGAAGGAACACAATGCTATCAATATCAGCACAAACGGCGATACCGATTG
 
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JMFN004I12+           ACCGCCGGCGTGCTTCCTCCCTCCGGTCATCTTCTCTCCCTCTTTGA             
JMSF023N09+           ACCGCCGGCGTGCTTCCTCCCTCCGGTCATCTTCTCTCCCTCTTTGACGTTGCTTGCATC
                      ____________________________________________________________
consensus             ACCGCCGGCGTGCTTCCTCCCTCCGGTCATCTTCTCTCCCTCTTTGACGTTGCTTGCATC