Contig 003673:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS052D08+                                 AACTTAAGTCACATCTCCTTTCNAAATTGCTGGTCTTA
JMFS034F09+                               TGAACTTAAGTCACATTTCCTTTTCAAATTGTTTGTCTTA
                      ____________________________________________________________
consensus                                 TGAACTTAAGTCACATTTCCTTTTCAAATTGTTTGTCTTA
 
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JMFS052D08+           ACTTCTGTGTCTTCCACTACTGGAGAAAGCTCAATGTTATGTTCTGCTTCACTATCAGAA
JMFS034F09+           ACTTCTGTGTTTTCCACTACTGGAGAAAGCTCAATGTTATGTTCTGCTTCACTATCAGAA
                      ____________________________________________________________
consensus             ACTTCTGTGTTTTCCACTACTGGAGAAAGCTCAATGTTATGTTCTGCTTCACTATCAGAA
 
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JMFS052D08+           TCCTTGGACATAGCCTCACTACTTTTTGGGCCTACAATCCCCTGCTGTATTTTTGCATGC
JMFS034F09+           TCCTTGGACATAGCCTCACTACTTTTTGGGCCTACAATCCCCTGCTGTATTTTTGCATGC
                      ____________________________________________________________
consensus             TCCTTGGACATAGCCTCACTACTTTTTGGGCCTACAATCCCCTGCTGTATTTTTGCATGC
 
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JMFS052D08+           TTTGACTTCAAAACTGGCAATGATTTATGATGATGTTGAAGCCATGAATCAAACTTCTTC
JMFS034F09+           TTTGACTTCAAAACTGGCAATGATTTATGATGATGTTGAAGCCATGAATCAAACTTCTTC
                      ____________________________________________________________
consensus             TTTGACTTCAAAACTGGCAATGATTTATGATGATGTTGAAGCCATGAATCAAACTTCTTC
 
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JMFS052D08+           TTGTTCTTCGATAAACGGGCAGCCTTCCTGCGTTCTCTTCTAGATCTATTATCTTCATCC
JMFS034F09+           TTGTTCTTCGATAAACGGGCAGCCTTCCTGCGTTCTCTTCTAGATCTATTATCTTCATCC
                      ____________________________________________________________
consensus             TTGTTCTTCGATAAACGGGCAGCCTTCCTGCGTTCTCTTCTAGATCTATTATCTTCATCC
 
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JMFS052D08+           ATTATCTAGTATCTGCTCAGCAATGAATATCAACAGAGAAAGATTGTGAGGTTGCAGGCT
JMFS034F09+           ATTATCTAGTATCTGCTCAGCAATGAATATCAACAGAGAAAGATTGTGAGGTTGCAGGCT
JMSF023L13+                                            CAGAGAAAGATTGTGAGGTTGCAGGCT
                      ____________________________________________________________
consensus             ATTATCTAGTATCTGCTCAGCAATGAATATCAACAGAGAAAGATTGTGAGGTTGCAGGCT
 
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JMFS052D08+           TGTATCACTATGTGCCTGCGTCTCATACTCTTAGCTTTGCAGATTCTGGCGTTGATGCGC
JMFS034F09+           TGTATCACTATGTGCCTGCGTCTCATACTCTTAGCTTTGCAGATTCTGGCGTTGATGCGC
JMSF023L13+           TGTATCACTATGTGCCTGCGTCTCATACTCTTAGCTTTGCAGATTCTGGCGTTGATGCGC
                      ____________________________________________________________
consensus             TGTATCACTATGTGCCTGCGTCTCATACTCTTAGCTTTGCAGATTCTGGCGTTGATGCGC
 
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JMFS052D08+           AGCGAGACTGGGGGAGGATGGGTAAATTCCAACTCTACAATTCGACAACCAAAGTTGAGT
JMFS034F09+           AGCGAGACTGGGGGAGGATGGGTAAATTCCAACTCTACAATTCGACAACCAAAGTTGAGT
JMSF023L13+           AGCGAGACTGGGGGAGGATGGGTAAATTCCAACTCTACAATTCGACAACCAAAGTTGAGT
                      ____________________________________________________________
consensus             AGCGAGACTGGGGGAGGATGGGTAAATTCCAACTCTACAATTCGACAACCAAAGTTGAGT
 
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JMFS052D08+           AGACGTCGGGCTGACGGAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAG
JMFS034F09+           AGACGACGGGCTGACGGAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAG
JMSF023L13+           AGACGACGGGCTGACGGAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAG
                      ____________________________________________________________
consensus             AGACGACGGGCTGACGGAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAG
 
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JMFS052D08+           TGCT                                                        
JMFS034F09+           TGCT                                                        
JMSF023L13+           TGCTGCTCAAATCAGTTGGATTCGTCAACACAAAAGACGGTATTCAATTGTCTTTTGTAC
                      ____________________________________________________________
consensus             TGCTGCTCAAATCAGTTGGATTCGTCAACACAAAAGACGGTATTCAATTGTCTTTTGTAC
 
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JMSF023L13+           ACCAGGATAAGAACATAAAGTATTACTGGCTTATAAAATCCTACCTATTTGTTTAGATCC
                      ____________________________________________________________
consensus             ACCAGGATAAGAACATAAAGTATTACTGGCTTATAAAATCCTACCTATTTGTTTAGATCC
 
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JMSF023L13+           GATTTGTTTCACTGCTTTTGTTCAGATTTCCAGATGTAGTCGCATGATGAATGAGGGAGC
                      ____________________________________________________________
consensus             GATTTGTTTCACTGCTTTTGTTCAGATTTCCAGATGTAGTCGCATGATGAATGAGGGAGC
 
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JMSF023L13+           CGTAAGGCAAAGCTGTGACCTGTGAAATGGAATATGGACTTTCTAGTTTCTTTCTATGCC
                      ____________________________________________________________
consensus             CGTAAGGCAAAGCTGTGACCTGTGAAATGGAATATGGACTTTCTAGTTTCTTTCTATGCC
 
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JMSF023L13+           AGGCCCCTTTGTAGCACCGCAGTCTGCAGTTGGGACGAAAGAAGAGTGGCGAGGTGATTC
                      ____________________________________________________________
consensus             AGGCCCCTTTGTAGCACCGCAGTCTGCAGTTGGGACGAAAGAAGAGTGGCGAGGTGATTC