| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS045G10 | Sequence | 512 | 003669 (4) | ref|XP_006362398.1| | 1e-48 | PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/m | |||||
| JMFS068E06 | Sequence | 642 | 003669 (4) | ref|XP_004233026.1| | 2e-76 | PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/m | |||||
| JMSF023C15 | Sequence | 701 | 003669 (4) | ref|XP_004233026.1| | 9e-77 | PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/m | 562 | 016097 | ref|XP_010658537.1| | 2e-34 | PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/m |
| JMSF047K18 | Sequence | 125 | 003669 (4) | ref|XP_009630454.1| | 5e-12 | PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/m | 627 | 004396 (2) | ref|XP_010658537.1| | 2e-67 | PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/m |
This contig is upended
. : . : . : . : . : . :
JMFS068E06+ CTGCATTGGCAGACCAAGCTGTAGTGAAAGACAAGCGT
JMSF023C15+ AAACTGCATTGGCAGACCAAGCTGTAGTGAAAGACAAGCGT
____________________________________________________________
consensus AAACTGCATTGGCAGACCAAGCTGTAGTGAAAGACAAGCGT
. : . : . : . : . : . :
JMFS068E06+ GGACCAACTTCCACAATAACTGCATCTAAATGTTTTGTCTTATCAATATGTAGAAAACTT
JMSF047K18+ AGAAAACTT
JMSF023C15+ GGACCAACTTCCACAATAACTGCATCTAAATGTTTTGTCTTATCAATATGTAGAAAACTT
____________________________________________________________
consensus GGACCAACTTCCACAATAACTGCATCTAAATGTTTTGTCTTATCAATATGTAGAAAACTT
. : . : . : . : . : . :
JMFS068E06+ TCAGTCCCCAAATTCTCAGGCTCATATGTCTCTCCCAAAACCCACTTAAGCACGGCATGC
JMFS045G10+ CATGC
JMSF047K18+ TCAGTCCCCAAATTCTCAGGCTCATATGTCTNTCCCAAAACCCACTTAAGCACGGCATGC
JMSF023C15+ TCAGTCCCCAAATTCTCAGGCTCATATGTCTCTCCCAAAACCCACTTAAGCACGGCATGC
____________________________________________________________
consensus TCAGTCCCCAAATTCTCAGGCTCATATGTCTCTCCCAAAACCCACTTAAGCACGGCATGC
. : . : . : . : . : . :
JMFS068E06+ TTCTCACTTGAAAGATCTGAATTCAAACCAATATTGAAACACTGCTCAGTTTTCAAGCCA
JMFS045G10+ TTCTCACTTGAAAGATCTGAATTCAAACCAATATTGAAACACTGCTCAGTTTTCAAGCCA
JMSF047K18+ TTCTCACTTGAAAGATCTGAATTCAAACCAATATTG
JMSF023C15+ TTCTCACTTGAAAGATCTGAATTCAAACCAATATTGAAACACTGCTCAGTTTTCAAGCCA
____________________________________________________________
consensus TTCTCACTTGAAAGATCTGAATTCAAACCAATATTGAAACACTGCTCAGTTTTCAAGCCA
. : . : . : . : . : . :
JMFS068E06+ ATTATTTGATGTGAGAATTTTGTTTGAACCAACTTGAGAAGTTCTGCAGTTGCACTATCT
JMFS045G10+ ATTATTTGATGTGAGAATTTTGTTTGAACCAACTTGAGAAGTTCTGCAGTTGCACTATCT
JMSF023C15+ ATTATTTGATGTGAGAATTTTGTTTGAACCAACTTGAGAAGTTCTGCAGTTGCACTATCT
____________________________________________________________
consensus ATTATTTGATGTGAGAATTTTGTTTGAACCAACTTGAGAAGTTCTGCAGTTGCACTATCT
. : . : . : . : . : . :
JMFS068E06+ TGAAGCAACGGGACGCGATAAAAATGAACAACATTTTCTGCAGGCTGTTGAACCTTGCTT
JMFS045G10+ TGAAGCAACGGGACGCGATAAAAATGAACAACATTTTCTGCAGGCTGTTGAACCTTGCTT
JMSF023C15+ TGAAGCAACGGGACGCGATAAAAATGAACAACATTTTCTGCAGGCTGTTGAACCTTGCTT
____________________________________________________________
consensus TGAAGCAACGGGACGCGATAAAAATGAACAACATTTTCTGCAGGCTGTTGAACCTTGCTT
. : . : . : . : . : . :
JMFS068E06+ GCCTCCTCACCTAGCAATGTGTTTACATTCCCAGAAACTACTGCTTTGACCTTTGCAGAA
JMFS045G10+ GCCTCCTCACCTAGCAATGTGTTTACATTCCCAGAAACTACTGCTTTGACCTTTGCAGAA
JMSF023C15+ GCCTCCTCACCTAGCAATGTGTTTACATTCCCAGAAACTACTGCTTTGACCTTTGCAGAA
____________________________________________________________
consensus GCCTCCTCACCTAGCAATGTGTTTACATTCCCAGAAACTACTGCTTTGACCTTTGCAGAA
. : . : . : . : . : . :
JMFS068E06+ AGATTTGATCGTACTCCGGCATTTTTATTAGTAAACTTGAGAGGACCTTGCCTTGCAGTT
JMFS045G10+ AGATTTGATCGTACTCCGGCATTTTTATTAGTAAACTTGAGAGGACCTTGCCTTGCAGTT
JMSF023C15+ AGATTTGATCGTACTCCGGCATTTTTATTAGTAAACTTGAGAGGACCTTGCCTTGCAGTT
____________________________________________________________
consensus AGATTTGATCGTACTCCGGCATTTTTATTAGTAAACTTGAGAGGACCTTGCCTTGCAGTT
. : . : . : . : . : . :
JMFS068E06+ ACACCCCAAAGCAAGTTCTGCCTAACTGAATGCCTTGATAAAGCTATTTTCTGTCTGTTT
JMFS045G10+ ACACCCCAAAGCAAGTTCTGCCTAACTGAATGCCTTGATAAAGCTATTTTCTGTTTGTTT
JMSF023C15+ ACACCCCAAAGCAAGTTCTGCCTAACTGAATGCCTTGATAAAGCTATTTTCTGTCTGTTT
____________________________________________________________
consensus ACACCCCAAAGCAAGTTCTGCCTAACTGAATGCCTTGATAAAGCTATTTTCTGTCTGTTT
. : . : . : . : . : . :
JMFS068E06+ GAGCCCAACAAAAATTCTTTTGCTGCAACATTCCAAGCAGTAGCCTCCATGGCGTCTACC
JMFS045G10+ GAGCCCAACAAAAATTCTTTTGCTGCAACATTCCAAGCAGTAGCCTCCATGGCGTCTACC
JMSF023C15+ GAGCCCAACAAAAATTCTTTTGCTGCAACATTCCAAGCAGTAGCCTCCATGGCGTCTACC
____________________________________________________________
consensus GAGCCCAACAAAAATTCTTTTGCTGCAACATTCCAAGCAGTAGCCTCCATGGCGTCTACC
. : . : . : . : . : . :
JMFS068E06+ TTGGATTGAAAAGAAGATAGCAACGAAGATTCCAACGGTACGAGGATGAACTGCTAAACG
JMFS045G10+ TTGGATTGAAAAGAAGATAGCAACGAAGATTCCAACGGGACGAGGATGAANTGGTAAACG
JMSF023C15+ TTGGATTGAAAAGAAGATAGCAACGAAGATTCCAACGGTACGAGGATGAACTGCTAAACG
____________________________________________________________
consensus TTGGATTGAAAAGAAGATAGCAACGAAGATTCCAACGGTACGAGGATGAACTGCTAAACG
. : . : . : . : . : . :
JMFS068E06+ TTAG
JMFS045G10+ TTAGAGCCCAAGNNAAGGCTTGAAAAC
JMSF023C15+ TTAGAGCCCAAGCTAAGGCTTGAAAACATGGCGAGACCCAAATGTTGAGAGAAGCCACTC
____________________________________________________________
consensus TTAGAGCCCAAGCTAAGGCTTGAAAACATGGCGAGACCCAAATGTTGAGAGAAGCCACTC