Contig 003666:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022H03Sequence687003666 (2)ref|XP_008218761.1|4e-20PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Prunus mume]
JMSF036K10Sequence712003666 (2)ref|XP_010068694.1|6e-19PREDICTED: leucine-rich repeat receptor protein kinase EXS-like [Eucalyptus gra697011375 (6)emb|CAN63562.1|3e-34hypothetical protein VITISV_037178 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF036K10+ AGAGATGNAGGAAGTAGCTTGGTTTAGCCACA
                      ____________________________________________________________
consensus AGAGATGNAGGAAGTAGCTTGGTTTAGCCACA
 
. : . : . : . : . : . :
JMSF036K10+ AATTCAGTAGGGGAAAAGTTGCTATATTTCCATACTGTAAAGACAAGTGTTGTAGGAAAC
                      ____________________________________________________________
consensus AATTCAGTAGGGGAAAAGTTGCTATATTTCCATACTGTAAAGACAAGTGTTGTAGGAAAC
 
. : . : . : . : . : . :
JMSF036K10+ TAGAAGAGTTGATGTGCAAAAGTGATGATGAGGGACTTGGAAGGTAGCAGGAAGATAGGC
                      ____________________________________________________________
consensus TAGAAGAGTTGATGTGCAAAAGTGATGATGAGGGACTTGGAAGGTAGCAGGAAGATAGGC
 
. : . : . : . : . : . :
JMSF036K10+ TTAGTGTTCTCAGAAAAGAAAGCTTAGAAATTGAGTGAAGCCAATCTGAAACAGAATGAA
JMSF022H03+ AGTGAAGCCAATCTGAAACAGAATGAA
                      ____________________________________________________________
consensus TTAGTGTTCTCAGAAAAGAAAGCTTAGAAATTGAGTGAAGCCAATCTGAAACAGAATGAA
 
. : . : . : . : . : . :
JMSF036K10+ GGTCTACGCAATCCATATTGAGATACTCCAAGGAAGAAAGATGAGAAATCCATTCCAAGG
JMSF022H03+ GGTCTACGCAATCCATATTGAGATACTCCAAGGAAGAAAGATGAGAAATCCATTCCAAGG
                      ____________________________________________________________
consensus GGTCTACGCAATCCATATTGAGATACTCCAAGGAAGAAAGATGAGAAATCCATTCCAAGG
 
. : . : . : . : . : . :
JMSF036K10+ TGTCAACCACTTTTAAACGTTGACCATAAAAGTTGTTGCCAATGTCAAGATATTTCAAAG
JMSF022H03+ TGTCAACCACTTTTAAACGTTGACCATAAAAGTTGTTGCCAATGTCAAGATATTTCAAAG
                      ____________________________________________________________
consensus TGTCAACCACTTTTAAACGTTGACCATAAAAGTTGTTGCCAATGTCAAGATATTTCAAAG
 
. : . : . : . : . : . :
JMSF036K10+ TGGAAATATTTCCCAGATGAGGAGGAACATTCCCAACAAATTTATTATAAGAAAGATTAA
JMSF022H03+ TGGAAATATTTCCCAGATGAGGAGGAACATTCCCAACAAATTTATTATAAGAAAGATTAA
                      ____________________________________________________________
consensus TGGAAATATTTCCCAGATGAGGAGGAACATTCCCAACAAATTTATTATAAGAAAGATTAA
 
. : . : . : . : . : . :
JMSF036K10+ GATAGACCAAGTTGTTGAGAGAGCCAATGAAACTTGGAATTCTATCAAATTTATTGAAAC
JMSF022H03+ GATAGACCAAGTTGTTGAGAGAGCCAATGAAACTTGGAATTCTATCAAATTTATTGAAAC
                      ____________________________________________________________
consensus GATAGACCAAGTTGTTGAGAGAGCCAATGAAACTTGGAATTCTATCAAATTTATTGAAAC
 
. : . : . : . : . : . :
JMSF036K10+ TAAGATCCAAGAAATTGAGAAAGGGTAAATGAAGCAAGGAAGGGCTGATTTCACCTTGAA
JMSF022H03+ TAAGATCCAAGAAATTGAGAAAGGGTAAATGAAGCAAGGAAGGGCTGATTTCACCTTGAA
                      ____________________________________________________________
consensus TAAGATCCAAGAAATTGAGAAAGGGTAAATGAAGCAAGGAAGGGCTGATTTCACCTTGAA
 
. : . : . : . : . : . :
JMSF036K10+ AGCCTGGGTTGTAGCATGGTGATCCATCAGTGCACAAGCCTTGACGCCCCAAATGAAGAG
JMSF022H03+ AGCCTGGGTTGTAGCATGGTGATCCATCAGTGCACAAGCCTTGACGCCCCAAATGAAGAG
                      ____________________________________________________________
consensus AGCCTGGGTTGTAGCATGGTGATCCATCAGTGCACAAGCCTTGACGCCCCAAATGAAGAG
 
. : . : . : . : . : . :
JMSF036K10+ CAACAACATGGGCAGTAGTTGTGTTATCACAACCAACTCCTTTCCATTTGCAGCAGTCAT
JMSF022H03+ CAACAACATGGGCAGTAGTTGTGTTATCACAACCAACTCCTTTCCATTTGCAGCAGTCAT
                      ____________________________________________________________
consensus CAACAACATGGGCAGTAGTTGTGTTATCACAACCAACTCCTTTCCATTTGCAGCAGTCAT
 
. : . : . : . : . : . :
JMSF036K10+ CATCATCTCCCCATGAGGAAAGAGAGCTTAATGGGTCAGAAATAATGCTATGTTTGAAGC
JMSF022H03+ CATCATCTCCCCATGAGGAAAGAGAGCTTAATGGGTCAGAAATAATGCTATGTTTGAAGC
                      ____________________________________________________________
consensus CATCATCTCCCCATGAGGAAAGAGAGCTTAATGGGTCAGAAATAATGCTATGTTTGAAGC
 
. : . : . : . : . : . :
JMSF036K10+ TTAGAAGAGCTTTTCTCTC
JMSF022H03+ TTAGAAGAGCTTTTCTCTCATTCTCAAAGCAGCTCCTACTCCCATTTAAATATTGAAGAA
                      ____________________________________________________________
consensus TTAGAAGAGCTTTTCTCTCATTCTCAAAGCAGCTCCTACTCCCATTTAAATATTGAAGAA
 
. : . : . : . : . : . :
JMSF022H03+ TAATCAAAAGGAACAGAAGCCACTGAAGATAAGAACCACTAATCCTCATCATCGACTTTA
                      ____________________________________________________________
consensus TAATCAAAAGGAACAGAAGCCACTGAAGATAAGAACCACTAATCCTCATCATCGACTTTA
 
. : . : . : . : . : . :
JMSF022H03+ ATTGGATTCAAGACAATTGATTTAGCAATATTATGTGTAAGTTTTGTTGTATGCTTTACC
                      ____________________________________________________________
consensus ATTGGATTCAAGACAATTGATTTAGCAATATTATGTGTAAGTTTTGTTGTATGCTTTACC