Contig 003664:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033H19Sequence488003664 (5)gb|KDP30591.1|4e-20hypothetical protein JCGZ_16244 [Jatropha curcas]783010347 (7)ref|XP_004229548.1|233PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum]
JMSF019B07Sequence417003664 (5)776010347 (7)ref|XP_004229548.1|233PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum]
JMSF021J13Sequence611003664 (5)ref|XP_009613301.1|126PREDICTED: uncharacterized protein LOC104106458 [Nicotiana tomentosiformis]774010347 (7)ref|XP_004229548.1|234PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum]
JMSF034C22Sequence680003664 (5)ref|XP_009613301.1|169PREDICTED: uncharacterized protein LOC104106458 [Nicotiana tomentosiformis]692010347 (7)ref|XP_004229548.1|179PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum]
JMSF044J08Sequence523003664 (5)ref|XP_009785344.1|103PREDICTED: uncharacterized protein LOC104233617 [Nicotiana sylvestris]790010347 (7)ref|XP_004229548.1|235PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF034C22+ TCACAGGAATAGTTCCTTCTGGACAACTTCCATTAAAATGCCAAAGCTGAG
                      ____________________________________________________________
consensus TCACAGGAATAGTTCCTTCTGGACAACTTCCATTAAAATGCCAAAGCTGAG
 
. : . : . : . : . : . :
JMSF034C22+ AAATTGGTATTGGCCCTTTCTTCTTGGCTCTCAGTGTGGAAACTTTGCTGGCCTTAAACA
JMSF021J13+ GGCCTTAAACA
                      ____________________________________________________________
consensus AAATTGGTATTGGCCCTTTCTTCTTGGCTCTCAGTGTGGAAACTTTGCTGGCCTTAAACA
 
. : . : . : . : . : . :
JMSF034C22+ GCCCTTCTGGATGATAATTTGGCCTCATCTGAATTGTGTGATTCTTGAGAAAGGGATGAT
JMFF033H19+ TCTTGAGAAAGGGATGAT
JMSF044J08+ GGATGAT
JMSF021J13+ GCCCTTCTGGATGATAATTTGGCCTCATCTGAATTGTGTGATTCTTGAGAAAGGGATGAT
                      ____________________________________________________________
consensus GCCCTTCTGGATGATAATTTGGCCTCATCTGAATTGTGTGATTCTTGAGAAAGGGATGAT
 
. : . : . : . : . : . :
JMSF034C22+ CAAAAGCTGGTTGGTGAGACATATGAACACAGTCAATGATGTCACCATCTGGGCTCTGAA
JMFF033H19+ CAAAAGCTGGTTGGTGAGACATATGAACACAGTCAATGATGTCACCATCTGGGCTCTGAA
JMSF044J08+ CAAAAGCTGGTTGGTGAGACATATGAACACAGTCAATGATGTCACCATCTGGGCTCTGAA
JMSF019B07+ TGAA
JMSF021J13+ CAAAAGCTGGTTGGTGAGACATATGAACACAGTCAATGATGTCACCATCTGGGCTCTGAA
                      ____________________________________________________________
consensus CAAAAGCTGGTTGGTGAGACATATGAACACAGTCAATGATGTCACCATCTGGGCTCTGAA
 
. : . : . : . : . : . :
JMSF034C22+ TTGACTTGACAGCGGGCTTGTTCAAGCGATTCAAGTGCTTCTGAACCAAGAACCTATTCG
JMFF033H19+ TTGACTTGACAGCGGGCTTGTTCAAGCGATTCAAGTGCTTCTGAACCAAGAACCTATTCG
JMSF044J08+ TTGACTTGACAGCGGGCTTGTTCAAGCGATTCAAGTGCTTCTGAACCAAGAACCTATTCG
JMSF019B07+ TTGACTTGACAGCGGGCTTGTTCAAGCGATTCAAGTGCTTCTGAACCAAGAACCTATTCG
JMSF021J13+ TTGACTTGACAGCGGGCTTGTTCAAGCGATTCAAGTGCTTCTGAACCAAGAACCTATTCG
                      ____________________________________________________________
consensus TTGACTTGACAGCGGGCTTGTTCAAGCGATTCAAGTGCTTCTGAACCAAGAACCTATTCG
 
. : . : . : . : . : . :
JMSF034C22+ TTTCCACCATGCTCTGCTTCTTGACAGCACCGGAGACTGAAATCATCATCAACAACAACC
JMFF033H19+ TTTCCACCATGCTCTGCTTCTTGACAGCACCGGAGACTGAAATCATCATCAACAACAACC
JMSF044J08+ TTTCCACCATGCTCTGCTTCTTGACAGCACCGGAGACTGAAATCATCATCAACAACAACC
JMSF019B07+ TTTCCACCATGCTCTGCTTCTTGACAGCACCGGAGACTGAAATCATCATCAACAACAACC
JMSF021J13+ TTTCCACCATGCTCTGCTTCTTGACAGCACCGGAGACTGAAATCATCATCAACAACAACC
                      ____________________________________________________________
consensus TTTCCACCATGCTCTGCTTCTTGACAGCACCGGAGACTGAAATCATCATCAACAACAACC
 
. : . : . : . : . : . :
JMSF034C22+ CCAAGACCAAAACACCATTCATTTCCGCCATGAAATTCATACTGGTTGGGTCTTGTGAGC
JMFF033H19+ CCAAGACCAAAACACCATTCATTTCCGCCATGAAATTCATACTGGTTGGGTCTTGTGAGC
JMSF044J08+ CCAAGACCAAAACACCATTCATTTCCGCCATGAAATTCATACTGGTTGGGTCTTGTGAGC
JMSF019B07+ CCAAGACCAAAACACCATTCATTTCCGCCATGAAATTCATACTGGTTGGGTCTTGTGAGC
JMSF021J13+ CCAAGACCAAAACACCATTCATTTCCGCCATGAAATTCATACTGGTTGGGTCTTGTGAGC
                      ____________________________________________________________
consensus CCAAGACCAAAACACCATTCATTTCCGCCATGAAATTCATACTGGTTGGGTCTTGTGAGC
 
. : . : . : . : . : . :
JMSF034C22+ TCCGAGGTCACAGAAATTGGCTCCTTCTTGGGTATTCAAGCATGAACATTTGCACACAAG
JMFF033H19+ TCCGAGGTCACAGAAATTGGCTCCTTCTTGGGTATTCAAGCATGAATATTTGCACACAAG
JMSF044J08+ TCCGAGGTCACAGAAATTGGCTCCTTCTTGGGTATTCAAGCATGAATATTTGCACACAAG
JMSF019B07+ TCCGAGGTCACAGAAATTGGCTCCTTCTTGGGTATTCAAGCATGAATATTTGCACACAAG
JMSF021J13+ TCCGAGGTCACAGAAATTGGCTCCTTCTTGGGTATTCAAGCATGAATATTTGCACACAAG
                      ____________________________________________________________
consensus TCCGAGGTCACAGAAATTGGCTCCTTCTTGGGTATTCAAGCATGAATATTTGCACACAAG
 
. : . : . : . : . : . :
JMSF034C22+ AATCTGGGTTCTGCAAAGATGATCATGAAAACACCAAAAAGACAGAATTTTTTTCACGGT
JMFF033H19+ AATCTGGGTTCTGCAAAGATGATCATGAAAACACCAAAAAGACAGAATTTTTTTCACGGT
JMSF044J08+ AATCTGGGTTCTGCAAAGATGATCATGAAAACACCAAAAAGACAGAATTTTTTTCACGGT
JMSF019B07+ AATCTGGGTTCTGCAAAGATGATCATGAAAACACCAAAAAGACAGAATTTTTTTCACGGT
JMSF021J13+ AATCTGGGTTCTGCAAAGATGATCATGAAAACACCAAAAAGACAGAATTTTTTTCACGGT
                      ____________________________________________________________
consensus AATCTGGGTTCTGCAAAGATGATCATGAAAACACCAAAAAGACAGAATTTTTTTCACGGT
 
. : . : . : . : . : . :
JMSF034C22+ TCAGAGGAGTTTGAAGGGTAGAATGGAAGGGTGAAGAGGTAGAAGGTGGTGGGTTGGTAG
JMFF033H19+ TCAGAGGAGTTTGAAGGGTAGAATGGAAGGGTGAAGAGGTAGAAGGTGGTGGGTTGGTAG
JMSF044J08+ TCAGAGGAGTTTGAAGGGTAGAATGGAAGGGTGAAGAGGTAGAAGGTGGTGGGTTGGTAG
JMSF019B07+ TCAGAGGAGTTTGAAGGGTAGAATGGAAGGGTGAAGAGGTAGAAGGTGGTGGGTTGGTAG
JMSF021J13+ TCAGAGGAGTTTGAAGGGTAGAATGGAAGGGTGAAGAGGTAGAAGGTGGTGGGTTGGTAG
                      ____________________________________________________________
consensus TCAGAGGAGTTTGAAGGGTAGAATGGAAGGGTGAAGAGGTAGAAGGTGGTGGGTTGGTAG
 
. : . : . : . : . : . :
JMSF034C22+ GACAGGGTTTCCTGGGAGAGGACTGAGGAGGAGGAGACGGTTAGTGTATTGTATGGTTTG
JMFF033H19+ GACAGGGTTTCCTGGGAGAGGACTGAGGAGGAGGAGACGGTTAGTGTAT
JMSF044J08+ GACAGGGTTTCCTGGGAGAGGACTGAGGAGGAGGAGACGGTT
JMSF019B07+ GACAGGGTTTCCTGGGAGAGGACTGAGGAGGAGGAGACGGTTAGTGTAT
JMSF021J13+ GACAGGGTTTCCTGGGAGAGGACTGAGGAGGAGGAGACGGTTAGTGTATTGTATGGTTTG
                      ____________________________________________________________
consensus GACAGGGTTTCCTGGGAGAGGACTGAGGAGGAGGAGACGGTTAGTGTATTGTATGGTTTG
 
. : . : . : . : . : . :
JMSF034C22+ CTTTTCCATCTTCTCCATTTAACTGCT
JMSF021J13+ CTTTTCCATCTTCTCCATTTAACTGCTGATTTCTTTGCCTCAGTGGATATACTGTTCCTC
                      ____________________________________________________________
consensus CTTTTCCATCTTCTCCATTTAACTGCTGATTTCTTTGCCTCAGTGGATATACTGTTCCTC