| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033H19 | Sequence | 488 | 003664 (5) | gb|KDP30591.1| | 4e-20 | hypothetical protein JCGZ_16244 [Jatropha curcas] | 783 | 010347 (7) | ref|XP_004229548.1| | 233 | PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum] |
| JMSF019B07 | Sequence | 417 | 003664 (5) | 776 | 010347 (7) | ref|XP_004229548.1| | 233 | PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum] | |||
| JMSF021J13 | Sequence | 611 | 003664 (5) | ref|XP_009613301.1| | 126 | PREDICTED: uncharacterized protein LOC104106458 [Nicotiana tomentosiformis] | 774 | 010347 (7) | ref|XP_004229548.1| | 234 | PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum] |
| JMSF034C22 | Sequence | 680 | 003664 (5) | ref|XP_009613301.1| | 169 | PREDICTED: uncharacterized protein LOC104106458 [Nicotiana tomentosiformis] | 692 | 010347 (7) | ref|XP_004229548.1| | 179 | PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum] |
| JMSF044J08 | Sequence | 523 | 003664 (5) | ref|XP_009785344.1| | 103 | PREDICTED: uncharacterized protein LOC104233617 [Nicotiana sylvestris] | 790 | 010347 (7) | ref|XP_004229548.1| | 235 | PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF034C22+ TCACAGGAATAGTTCCTTCTGGACAACTTCCATTAAAATGCCAAAGCTGAG
____________________________________________________________
consensus TCACAGGAATAGTTCCTTCTGGACAACTTCCATTAAAATGCCAAAGCTGAG
. : . : . : . : . : . :
JMSF034C22+ AAATTGGTATTGGCCCTTTCTTCTTGGCTCTCAGTGTGGAAACTTTGCTGGCCTTAAACA
JMSF021J13+ GGCCTTAAACA
____________________________________________________________
consensus AAATTGGTATTGGCCCTTTCTTCTTGGCTCTCAGTGTGGAAACTTTGCTGGCCTTAAACA
. : . : . : . : . : . :
JMSF034C22+ GCCCTTCTGGATGATAATTTGGCCTCATCTGAATTGTGTGATTCTTGAGAAAGGGATGAT
JMFF033H19+ TCTTGAGAAAGGGATGAT
JMSF044J08+ GGATGAT
JMSF021J13+ GCCCTTCTGGATGATAATTTGGCCTCATCTGAATTGTGTGATTCTTGAGAAAGGGATGAT
____________________________________________________________
consensus GCCCTTCTGGATGATAATTTGGCCTCATCTGAATTGTGTGATTCTTGAGAAAGGGATGAT
. : . : . : . : . : . :
JMSF034C22+ CAAAAGCTGGTTGGTGAGACATATGAACACAGTCAATGATGTCACCATCTGGGCTCTGAA
JMFF033H19+ CAAAAGCTGGTTGGTGAGACATATGAACACAGTCAATGATGTCACCATCTGGGCTCTGAA
JMSF044J08+ CAAAAGCTGGTTGGTGAGACATATGAACACAGTCAATGATGTCACCATCTGGGCTCTGAA
JMSF019B07+ TGAA
JMSF021J13+ CAAAAGCTGGTTGGTGAGACATATGAACACAGTCAATGATGTCACCATCTGGGCTCTGAA
____________________________________________________________
consensus CAAAAGCTGGTTGGTGAGACATATGAACACAGTCAATGATGTCACCATCTGGGCTCTGAA
. : . : . : . : . : . :
JMSF034C22+ TTGACTTGACAGCGGGCTTGTTCAAGCGATTCAAGTGCTTCTGAACCAAGAACCTATTCG
JMFF033H19+ TTGACTTGACAGCGGGCTTGTTCAAGCGATTCAAGTGCTTCTGAACCAAGAACCTATTCG
JMSF044J08+ TTGACTTGACAGCGGGCTTGTTCAAGCGATTCAAGTGCTTCTGAACCAAGAACCTATTCG
JMSF019B07+ TTGACTTGACAGCGGGCTTGTTCAAGCGATTCAAGTGCTTCTGAACCAAGAACCTATTCG
JMSF021J13+ TTGACTTGACAGCGGGCTTGTTCAAGCGATTCAAGTGCTTCTGAACCAAGAACCTATTCG
____________________________________________________________
consensus TTGACTTGACAGCGGGCTTGTTCAAGCGATTCAAGTGCTTCTGAACCAAGAACCTATTCG
. : . : . : . : . : . :
JMSF034C22+ TTTCCACCATGCTCTGCTTCTTGACAGCACCGGAGACTGAAATCATCATCAACAACAACC
JMFF033H19+ TTTCCACCATGCTCTGCTTCTTGACAGCACCGGAGACTGAAATCATCATCAACAACAACC
JMSF044J08+ TTTCCACCATGCTCTGCTTCTTGACAGCACCGGAGACTGAAATCATCATCAACAACAACC
JMSF019B07+ TTTCCACCATGCTCTGCTTCTTGACAGCACCGGAGACTGAAATCATCATCAACAACAACC
JMSF021J13+ TTTCCACCATGCTCTGCTTCTTGACAGCACCGGAGACTGAAATCATCATCAACAACAACC
____________________________________________________________
consensus TTTCCACCATGCTCTGCTTCTTGACAGCACCGGAGACTGAAATCATCATCAACAACAACC
. : . : . : . : . : . :
JMSF034C22+ CCAAGACCAAAACACCATTCATTTCCGCCATGAAATTCATACTGGTTGGGTCTTGTGAGC
JMFF033H19+ CCAAGACCAAAACACCATTCATTTCCGCCATGAAATTCATACTGGTTGGGTCTTGTGAGC
JMSF044J08+ CCAAGACCAAAACACCATTCATTTCCGCCATGAAATTCATACTGGTTGGGTCTTGTGAGC
JMSF019B07+ CCAAGACCAAAACACCATTCATTTCCGCCATGAAATTCATACTGGTTGGGTCTTGTGAGC
JMSF021J13+ CCAAGACCAAAACACCATTCATTTCCGCCATGAAATTCATACTGGTTGGGTCTTGTGAGC
____________________________________________________________
consensus CCAAGACCAAAACACCATTCATTTCCGCCATGAAATTCATACTGGTTGGGTCTTGTGAGC
. : . : . : . : . : . :
JMSF034C22+ TCCGAGGTCACAGAAATTGGCTCCTTCTTGGGTATTCAAGCATGAACATTTGCACACAAG
JMFF033H19+ TCCGAGGTCACAGAAATTGGCTCCTTCTTGGGTATTCAAGCATGAATATTTGCACACAAG
JMSF044J08+ TCCGAGGTCACAGAAATTGGCTCCTTCTTGGGTATTCAAGCATGAATATTTGCACACAAG
JMSF019B07+ TCCGAGGTCACAGAAATTGGCTCCTTCTTGGGTATTCAAGCATGAATATTTGCACACAAG
JMSF021J13+ TCCGAGGTCACAGAAATTGGCTCCTTCTTGGGTATTCAAGCATGAATATTTGCACACAAG
____________________________________________________________
consensus TCCGAGGTCACAGAAATTGGCTCCTTCTTGGGTATTCAAGCATGAATATTTGCACACAAG
. : . : . : . : . : . :
JMSF034C22+ AATCTGGGTTCTGCAAAGATGATCATGAAAACACCAAAAAGACAGAATTTTTTTCACGGT
JMFF033H19+ AATCTGGGTTCTGCAAAGATGATCATGAAAACACCAAAAAGACAGAATTTTTTTCACGGT
JMSF044J08+ AATCTGGGTTCTGCAAAGATGATCATGAAAACACCAAAAAGACAGAATTTTTTTCACGGT
JMSF019B07+ AATCTGGGTTCTGCAAAGATGATCATGAAAACACCAAAAAGACAGAATTTTTTTCACGGT
JMSF021J13+ AATCTGGGTTCTGCAAAGATGATCATGAAAACACCAAAAAGACAGAATTTTTTTCACGGT
____________________________________________________________
consensus AATCTGGGTTCTGCAAAGATGATCATGAAAACACCAAAAAGACAGAATTTTTTTCACGGT
. : . : . : . : . : . :
JMSF034C22+ TCAGAGGAGTTTGAAGGGTAGAATGGAAGGGTGAAGAGGTAGAAGGTGGTGGGTTGGTAG
JMFF033H19+ TCAGAGGAGTTTGAAGGGTAGAATGGAAGGGTGAAGAGGTAGAAGGTGGTGGGTTGGTAG
JMSF044J08+ TCAGAGGAGTTTGAAGGGTAGAATGGAAGGGTGAAGAGGTAGAAGGTGGTGGGTTGGTAG
JMSF019B07+ TCAGAGGAGTTTGAAGGGTAGAATGGAAGGGTGAAGAGGTAGAAGGTGGTGGGTTGGTAG
JMSF021J13+ TCAGAGGAGTTTGAAGGGTAGAATGGAAGGGTGAAGAGGTAGAAGGTGGTGGGTTGGTAG
____________________________________________________________
consensus TCAGAGGAGTTTGAAGGGTAGAATGGAAGGGTGAAGAGGTAGAAGGTGGTGGGTTGGTAG
. : . : . : . : . : . :
JMSF034C22+ GACAGGGTTTCCTGGGAGAGGACTGAGGAGGAGGAGACGGTTAGTGTATTGTATGGTTTG
JMFF033H19+ GACAGGGTTTCCTGGGAGAGGACTGAGGAGGAGGAGACGGTTAGTGTAT
JMSF044J08+ GACAGGGTTTCCTGGGAGAGGACTGAGGAGGAGGAGACGGTT
JMSF019B07+ GACAGGGTTTCCTGGGAGAGGACTGAGGAGGAGGAGACGGTTAGTGTAT
JMSF021J13+ GACAGGGTTTCCTGGGAGAGGACTGAGGAGGAGGAGACGGTTAGTGTATTGTATGGTTTG
____________________________________________________________
consensus GACAGGGTTTCCTGGGAGAGGACTGAGGAGGAGGAGACGGTTAGTGTATTGTATGGTTTG
. : . : . : . : . : . :
JMSF034C22+ CTTTTCCATCTTCTCCATTTAACTGCT
JMSF021J13+ CTTTTCCATCTTCTCCATTTAACTGCTGATTTCTTTGCCTCAGTGGATATACTGTTCCTC
____________________________________________________________
consensus CTTTTCCATCTTCTCCATTTAACTGCTGATTTCTTTGCCTCAGTGGATATACTGTTCCTC