Contig 003663:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003N02Sequence397003663 (6)ref|XP_009780105.1|3e-16PREDICTED: interactor of constitutive active ROPs 3-like isoform X1 [Nicotiana 715012604 (6)ref|XP_009780105.1|2e-84PREDICTED: interactor of constitutive active ROPs 3-like isoform X1 [Nicotiana
JMSF005M24Sequence353003663 (6)ref|XP_009780105.1|4e-26PREDICTED: interactor of constitutive active ROPs 3-like isoform X1 [Nicotiana 279012604 (6)ref|XP_011089861.1|4e-05PREDICTED: LOW QUALITY PROTEIN: interactor of constitutive active ROPs 3 [Sesam
JMSF021I13Sequence653003663 (6)ref|XP_009780105.1|2e-30PREDICTED: interactor of constitutive active ROPs 3-like isoform X1 [Nicotiana 758012604 (6)gb|KJB35596.1|6e-62hypothetical protein B456_006G121200 [Gossypium raimondii] gb|KJB35597.1| hypoth
JMSF027H08Sequence687003663 (6)ref|XP_004251270.1|2e-37PREDICTED: interactor of constitutive active ROPs 3-like isoform X2 [Solanum ly724012604 (6)gb|KJB35596.1|9e-61hypothetical protein B456_006G121200 [Gossypium raimondii] gb|KJB35597.1| hypoth
JMSF027P17Sequence646003663 (6)ref|XP_004251270.1|1e-37PREDICTED: interactor of constitutive active ROPs 3-like isoform X2 [Solanum ly765012604 (6)ref|XP_009780111.1|2e-69PREDICTED: interactor of constitutive active ROPs 3-like isoform X2 [Nicotiana
JMSF032J18Sequence670003663 (6)ref|XP_009780105.1|6e-32PREDICTED: interactor of constitutive active ROPs 3-like isoform X1 [Nicotiana 718012604 (6)gb|KJB35596.1|1e-57hypothetical protein B456_006G121200 [Gossypium raimondii] gb|KJB35597.1| hypoth

Alignment

This contig is upended


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JMSF027P17+                                                        TCATTCAAGGCGGAA
JMSF027H08+                                                                    GAA
                      ____________________________________________________________
consensus                                                          TCATTCAAGGCGGAA
 
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JMSF027P17+           ACCAGTGCACTCGAGTTAGTCACCTCGAGCTCACATTCCACCACCTTAACCGGTTCCTCA
JMSF027H08+           ACCAGTGCACTCGAGTTAGTCACCTCGAGCTCACATTCCACCACCTTAACCGGTTCCTCA
                      ____________________________________________________________
consensus             ACCAGTGCACTCGAGTTAGTCACCTCGAGCTCACATTCCACCACCTTAACCGGTTCCTCA
 
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JMSF027P17+           GGAGACTTCTGAGGTTCAGTCACCGAAACCTCCTCAGCAACTGCTCGATTCAACAATCGC
JMSF027H08+           GGAGACTTCTGAGGTTCAGTCACCGAAACCTCCTCAGCAACTGCTCGATTCAACAATCGC
                      ____________________________________________________________
consensus             GGAGACTTCTGAGGTTCAGTCACCGAAACCTCCTCAGCAACTGCTCGATTCAACAATCGC
 
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JMSF027P17+           TTCTCGGATTCTTCCAGTTTCGAAGATATGGCAGCAAGCTGCTTCTTTGTCTCCCCCGCT
JMSF027H08+           TTCTCGGATTCTTCCAGTTTCGAAGATATGGCAGCAAGCTGCTTCTTTGTCTCCCCCGCT
JMSF032J18+                                                             CTCCCCCGCT
                      ____________________________________________________________
consensus             TTCTCGGATTCTTCCAGTTTCGAAGATATGGCAGCAAGCTGCTTCTTTGTCTCCCCCGCT
 
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JMSF027P17+           TCTTGCTCTGCTTGATTCTTCAACGCTTCTGTTGAACATAACTCGTCCTTTACTTTCTTC
JMSF027H08+           TCTTGCTCTGCTTGATTCTTCAACGCTTCTGTTGAACATAACTCGTCCTTTACTTTCTTC
JMSF032J18+           TCTTGCTCTGCTTGATTCTTCAACGCTTCTGTTGAACATAACTCGTCCTTTACTTTCTTC
JMSF021I13+                  CTGCTTGATTCTTCAACGCTTCTGTTGAACATAACTCGTCCTTTACTTTCTTC
                      ____________________________________________________________
consensus             TCTTGCTCTGCTTGATTCTTCAACGCTTCTGTTGAACATAACTCGTCCTTTACTTTCTTC
 
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JMSF027P17+           AGATCATTCTGAAGTTCAGAAACCCGAGTTTCCAACTCACTCACTCTGCTCGAGCGCTTC
JMSF027H08+           AGATCATTCTGAAGTTCAGAAACCCGAGTTTCCAACTCACTCACTCTGCTCGAGCGCTTC
JMSF032J18+           AGATCATTCTGAAGTTCAGAAACCCGAGTTTCCAACTCACTCACTCTGCTCGAGCGCTTC
JMSF005M24+                          TCAGAAACCCGAGTTTCCAACTCACTCACTCTGCTCGAGCGCTTC
JMSF021I13+           AGATCATTCTGAAGTTCAGAAACCCGAGTTTCCAACTCACTCACTCTGCTCGAGCGCTTC
                      ____________________________________________________________
consensus             AGATCATTCTGAAGTTCAGAAACCCGAGTTTCCAACTCACTCACTCTGCTCGAGCGCTTC
 
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JMSF027P17+           TCTGATCCTAAGCTCTTAGGCGACTTTTTCTCATTGACTTTAGGGCTTCTCTCCTTTGTC
JMSF027H08+           TCTGATCCTAAGCTCTTAGGCGACTTTTTCTCATTGACTTTAGGGCTTCTCTCCTTTGTC
JMSF032J18+           TCTGATCCTAAGCTCTTAGGCGACTTTTTCTCATTGACTTTAGGGCTTCTCTCCTTTGTC
JMSF005M24+           TCTGATCCTAAGCTCTTAGGCGACTTTTTCTCATTGACTTTAGGGCTTCTCTCCTTTGTC
JMSF021I13+           TCTGATCCTAAGCTCTTAGGCGACTTTTTCTCATTGACTTTAGGGCTTCTCTCCTTTGTC
                      ____________________________________________________________
consensus             TCTGATCCTAAGCTCTTAGGCGACTTTTTCTCATTGACTTTAGGGCTTCTCTCCTTTGTC
 
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JMSF027P17+           CGGCTAATTACATTAGGAGAGGACGAGGTAGAATCAGGCACAGTTGGCACAAGCTTACGC
JMSF027H08+           CGGCTAATTACATTAGGAGAGGACGAGGTAGAATCAGGCACAGTTGGCACAAGCTTACGC
JMSF032J18+           CGGCTAATTACATTAGGAGAGGACGAGGTAGAATCAGGCACAGTTGGCACAAGCTTACGC
JMSF003N02+                                            TCAGGCACAGTTGGCACAAGCTTACGC
JMSF005M24+           CGGCTAATTACATTAGGAGAGGACGAGGTAGAATCAGGCACAGTTGGCACAAGCTTACGC
JMSF021I13+           CGGCTAATTACATTAGGAGAGGACGAGGTAGAATCAGGCACAGTTGGCACAAGCTTACGC
                      ____________________________________________________________
consensus             CGGCTAATTACATTAGGAGAGGACGAGGTAGAATCAGGCACAGTTGGCACAAGCTTACGC
 
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JMSF027P17+           ACAACACGTGGAGAAATCTTCTGAGACGCATCTTGAGAGGAAGCTCGTGGGGAGAACTTT
JMSF027H08+           ACAACACGTGGAGAAATCTTCTGAGACGCATCTTGAGAGGAAGCTCGTGGGGAGAACTTT
JMSF032J18+           ACAACACGTGGAGAAATCTTCTGAGACGCATCTTGAGAGGAAGCTCGTGGGGAGAACTTT
JMSF003N02+           ACAACACGTGGAGAAATCTTCTGAGACGCATCTTGAGAGGAAGCTCGTGGGGAGAACTTT
JMSF005M24+           ACAACACGTGGAGAAATCTTCTGAGACGCATCTTGAGAGGAAGCTCGTGGGGAGAACTTT
JMSF021I13+           ACAACACGTGGAGAAATCTTCTGAGACGCATCTTGAGAGGAAGCTCGTGGGGAGAACTTT
                      ____________________________________________________________
consensus             ACAACACGTGGAGAAATCTTCTGAGACGCATCTTGAGAGGAAGCTCGTGGGGAGAACTTT
 
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JMSF027P17+           CGAGGCACTTCTTGAGAACCAGCTCGAGGTGAGATCTTTAGGGGGACTCTTGAAGTCACT
JMSF027H08+           CGAGGCACTTCTTGAGAACCAGCTCGAGGTGAGATCTTTAGGGGGACTCTTGAAGTCACT
JMSF032J18+           CGAGGCACTTCTTGAGAACCAGCTCGAGGTGAGATCTTTAGGGGGACTCTTGAAGTCACT
JMSF003N02+           CGAGGCACTTCTTGAGAACCAGCTCGAGGTGAGATCTTTAGGGGGACTCTTGAAGTCACT
JMSF005M24+           CGAGGCACTTCTTGAGAACCAGCTCGAGGTGAGATCTTTAGGGGGACTCTTGAAGTCACT
JMSF021I13+           CGAGGCACTTCTTGAGAACCAGCTCGAGGTGAGATCTTTAGGGGGACTCTTGAAGTCACT
                      ____________________________________________________________
consensus             CGAGGCACTTCTTGAGAACCAGCTCGAGGTGAGATCTTTAGGGGGACTCTTGAAGTCACT
 
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JMSF027P17+           GATTGTGGTGATCTTCGTTGAGGTACTTCAGATGAGCAATTTCTTGACTTTGGCGTCTGC
JMSF027H08+           GATTGTGGTGATCTTCGTTGAGGTACTTCAGATGAGCAATTTCTTGACTTTGGCGTCTGC
JMSF032J18+           GATTGTGGTGATCTTCGTTGAGGTACTTCAGATGAGCAATTTCTTGACTTTGGCGTCTGC
JMSF003N02+           GATTGTGGTGATCTTCGTTGAGGTACTTCAGATGAGCAATTTCTTGACTTTGGCGTCTGC
JMSF005M24+           GATTGTGGTGATCTTCGTTGAGGTACTTCAGATGAGCAATTTCTTGACTTTGGCGTCTGC
JMSF021I13+           GATTGTGGTGATCTTCGTTGAGGTACTTCAGATGAGCAATTTCTTGACTTTGGCGTCTGC
                      ____________________________________________________________
consensus             GATTGTGGTGATCTTCGTTGAGGTACTTCAGATGAGCAATTTCTTGACTTTGGCGTCTGC
 
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JMSF027P17+           ATATCTCAACCACCCTCGTGACCACGCTAT                              
JMSF027H08+           ATATCTCAACCACCCTCGTGACCACGCTATGAATATGAATCAGAACGCTGGAGAATCGTT
JMSF032J18+           ATATCTCAACCACCCTCGTGACCACGCTATGAATATGAATCAGAACGCTGGAGAATCGTT
JMSF003N02+           ATATCTCAACCACCCTCGTGACCACGCTATGAATATGAATCAGAACGCTGGAGAATCGTT
JMSF005M24+           ATATCTC                                                     
JMSF021I13+           ATATCTCAACCACCCTCGTGACCACGCTATGAATATGAATCAGAACGCTGGAGAATCGTT
                      ____________________________________________________________
consensus             ATATCTCAACCACCCTCGTGACCACGCTATGAATATGAATCAGAACGCTGGAGAATCGTT
 
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JMSF027H08+           TTTACCACTTCAATGCTTCCC                                       
JMSF032J18+           TTTACCACTTCAATGCTTCCCTGCCCCACAGCCCGAGAAGATGGAATGGAGGCGAGGACT
JMSF003N02+           TTTACCACTTCAATGCTTCCCTGCCCCACAGCCCGAGAAGATGGAATGGAGGCGAGGACT
JMSF021I13+           TTTACCACTTCAATGCTTCCCTGCCCCACAGCCCGAGAAGATGGAATGGAGGCGAGGACT
                      ____________________________________________________________
consensus             TTTACCACTTCAATGCTTCCCTGCCCCACAGCCCGAGAAGATGGAATGGAGGCGAGGACT
 
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JMSF032J18+           TGAAGAATGTGCAGAAAATTGTTGCCCCTTTGAAGCATTACAGGAAGTAGAGAAAGGAGT
JMSF003N02+           TGAAGAATGTGCAGAAAATTGTTGCCCCTTTGAAGCATTACAGGAAGTAGAGAAAGGAGT
JMSF021I13+           TGAAGAATGTGCAGAAAATTGTTGCCCCTTTGAAGCATTACAGGAAGTAGAGAAAGGAGT
                      ____________________________________________________________
consensus             TGAAGAATGTGCAGAAAATTGTTGCCCCTTTGAAGCATTACAGGAAGTAGAGAAAGGAGT
 
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JMSF032J18+           GGGCCGTCTGTTTCCGCGATTGTTACTGCTGAAATTTGAAGATGCAGAGCACAGTACTCC
JMSF003N02+           GGGCCGTC                                                    
JMSF021I13+           GGGCCGTCTGTTTCCGCGATTGTTACTGCTGAAATTTGAAGATGCAGAGCACAGTACTCC
                      ____________________________________________________________
consensus             GGGCCGTCTGTTTCCGCGATTGTTACTGCTGAAATTTGAAGATGCAGAGCACAGTACTCC