| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS006H12 | Sequence | 525 | 003662 (6) | ref|XP_006345425.1| | 4e-07 | PREDICTED: putative zinc transporter At3g08650-like [Solanum tuberosum] | |||||
| JMFS137B06 | Sequence | 491 | 003662 (6) | ||||||||
| JMFS157E03 | Sequence | 619 | 003662 (6) | ref|XP_006345425.1| | 1e-06 | PREDICTED: putative zinc transporter At3g08650-like [Solanum tuberosum] | |||||
| JMSF012M04 | Sequence | 507 | 003662 (6) | 726 | 007193 (3) | ref|XP_009776322.1| | 8e-72 | PREDICTED: putative zinc transporter At3g08650 [Nicotiana sylvestris] ref|XP_009 | |||
| JMSF021H13 | Sequence | 707 | 003662 (6) | ref|XP_011091656.1| | 1e-11 | PREDICTED: putative zinc transporter At3g08650 [Sesamum indicum] ref|XP_01109165 | 790 | 007193 (3) | ref|XP_009776322.1| | 1e-74 | PREDICTED: putative zinc transporter At3g08650 [Nicotiana sylvestris] ref|XP_009 |
| JMSF039O06 | Sequence | 689 | 003662 (6) | ref|XP_006345425.1| | 3e-06 | PREDICTED: putative zinc transporter At3g08650-like [Solanum tuberosum] | 814 | 007193 (3) | ref|XP_009776322.1| | 2e-79 | PREDICTED: putative zinc transporter At3g08650 [Nicotiana sylvestris] ref|XP_009 |
This contig is upended
. : . : . : . : . : . :
JMSF039O06+ TCAAGGTCAACAAAGAAGAAC
____________________________________________________________
consensus TCAAGGTCAACAAAGAAGAAC
. : . : . : . : . : . :
JMSF039O06+ NGTACTGCACCCAAGCCAGTAGCAGCAGCCATAGCAAGCGTGAAAAACGCAACTGTAGAG
JMFS157E03+ AAAAACGCAACTGTAGAG
JMSF021H13+ AGCCAGTAGCAGCAGCCATAGCAAGCGTGAAAAACGCAACTGTAGAG
____________________________________________________________
consensus NGTACTGCACCCAAGCCAGTAGCAGCAGCCATAGCAAGCGTGAAAAACGCAACTGTAGAG
. : . : . : . : . : . :
JMSF039O06+ ACTGAAACCCTATTGTTCCCGCCCCTCAAGTCACCGTTTCCATTACTACCACCATCAGAA
JMFS157E03+ ACTGAAACCCTATTGTTCCCGCCCCTCAAGTCACCGTTTCCATTACTACCACCATCAGAA
JMFS006H12+ AAGTCACCGTTTCCATTTCTACCACCATCAGAA
JMSF021H13+ ACTGAAACCCTATTGTTCCCGCCCCTCAAGTCACCGTTTCCATTACTACCACCATCAGAA
____________________________________________________________
consensus ACTGAAACCCTATTGTTCCCGCCCCTCAAGTCACCGTTTCCATTACTACCACCATCAGAA
. : . : . : . : . : . :
JMSF039O06+ GTAAAGGCATACTCTTTACCAGACCCATCTATTACGTTACTTCCAGAATTCGTCAGTGGA
JMFS137B06+ TATTACGTTACTTCCAGAATTCGTCAGTGGA
JMFS157E03+ GTAAAGGCATACTCTTTACCAGACCCATCTATTACGTTACTTCCAGAATTCGTCAGTGGA
JMFS006H12+ GTAAAGGCATACTCTTTACCAGACCCATCTATTACGTTACTTCCAGAATTCGTCAGTGGA
JMSF021H13+ GTAAAGGCATACTCTTTACCAGACCCATCTATTACGTTACTTCCAGAATTCGTCAGTGGA
____________________________________________________________
consensus GTAAAGGCATACTCTTTACCAGACCCATCTATTACGTTACTTCCAGAATTCGTCAGTGGA
. : . : . : . : . : . :
JMSF039O06+ GCAGTTACTTTTTGTTTAGTTCCATTTTCAGACTCTGCGGTCACGTGGCCACTCAACACA
JMFS137B06+ GCAGTTACTTTTTGTTTAGTTCCATTTTCAGACTCTGCGGTCACGTGGCCACTCAACACA
JMFS157E03+ GCAGTTACTTTTTGTTTAGTTCCATTTTCAGACTCTGCGGTCACGTGGCCACTCAACACA
JMSF012M04+ TCTGCGGTCACGTGGCCACTCAACACA
JMFS006H12+ GCAGTTACTTTTTGTTTAGTTCCATTTTCAGACTCTGCGGTCACGTGGCCACTCAACACA
JMSF021H13+ GCAGTTACTTTTTGTTTAGTTCCATTTTCAGACTCTGCGGTCACGTGGCCACTCAACACA
____________________________________________________________
consensus GCAGTTACTTTTTGTTTAGTTCCATTTTCAGACTCTGCGGTCACGTGGCCACTCAACACA
. : . : . : . : . : . :
JMSF039O06+ GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTCGTAAGT
JMFS137B06+ GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTAGTAAGT
JMFS157E03+ GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTCGTAAGT
JMSF012M04+ GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTCGTAAGT
JMFS006H12+ GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTCGTAAGT
JMSF021H13+ GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTCGTAAGT
____________________________________________________________
consensus GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTCGTAAGT
. : . : . : . : . : . :
JMSF039O06+ GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
JMFS137B06+ GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
JMFS157E03+ GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
JMSF012M04+ GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
JMFS006H12+ GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
JMSF021H13+ GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
____________________________________________________________
consensus GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
. : . : . : . : . : . :
JMSF039O06+ TTGATGTAACATACAGCTCTCTAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
JMFS137B06+ TTGATGTAACATACAGCTCTATAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
JMFS157E03+ TTGATGTAACATACAGCTCTATAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
JMSF012M04+ TTGATGTAACATACAGCTCTCTAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
JMFS006H12+ TTGATGTAACATACAGCTCTCTAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
JMSF021H13+ TTGATGTAACATACAGCTCTCTAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
____________________________________________________________
consensus TTGATGTAACATACAGCTCTCTAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
. : . : . : . : . : . :
JMSF039O06+ AGAATCTGTATCCAACAAATTCTCCTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
JMFS137B06+ AGAATCTGTATCCAACAAATTCTCCTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
JMFS157E03+ AGAATCTGTATCCAACAAATTCTCGTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
JMSF012M04+ AGAATCTGTATCCAACAAATTCTCCTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
JMFS006H12+ AGAATCTGTATCCAACAAATTCTCCTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
JMSF021H13+ AGAATCTGTATCCAACAAATTCTCCTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
____________________________________________________________
consensus AGAATCTGTATCCAACAAATTCTCCTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
. : . : . : . : . : . :
JMSF039O06+ CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGACCAAGTCTGATATAAGATGCTCTTTT
JMFS137B06+ CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGACCAAGTATGATATAAGATGCTCTTTT
JMFS157E03+ CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGACCAAGTCTGATATAAGATGCTCTTTT
JMSF012M04+ CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGACCAAGTCTGATATAAGATGCTCTTTT
JMFS006H12+ CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGTCCAAGTCTGATATAACATGCTCTTTT
JMSF021H13+ CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGACCAAGTCTGATATAAGATGCTCTTTT
____________________________________________________________
consensus CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGACCAAGTCTGATATAAGATGCTCTTTT
. : . : . : . : . : . :
JMSF039O06+ TCTCAGGCGTGGATCAGGAACCAGAGGGGCAAACCATTGACTGGGTCGTCGGTAGAAGCT
JMFS137B06+ TCTCAGGCGTGGATCAGGAACCAGAGGGGCAAACCATTGACTGGGTCGTCGGTAGAAGCT
JMFS157E03+ TCTCAGGCGTGGATCAGGAACCAGAGGGGCAAACCATTGACTGGGTCGTCGGTAGAAGCT
JMSF012M04+ TCTCAGGCGTGGATCAGGAACCAGAGGGGCAAACCATTGACTGGGTCGTCGGTAGAAGCT
JMFS006H12+ TATCAGGCGTGGATCAG
JMSF021H13+ TCTCAGGCGTGGATCAGGAACCAGAGGGGCAAACCATTGACTGGGTCGTCGGTAGAAGCT
____________________________________________________________
consensus TCTCAGGCGTGGATCAGGAACCAGAGGGGCAAACCATTGACTGGGTCGTCGGTAGAAGCT
. : . : . : . : . : . :
JMSF039O06+ GAGAAGATTTAGGGTTTCAGAGAAGAAGTGTTGGAATGGAAGGAGGAAAGAAGGGTCGGT
JMFS137B06+ GACAAGATTTAGGGTTTCAGAGAAGAAGTGTTGGAATGGA
JMFS157E03+ GAGAAGATTTAGGGTTTCAGAGAAGAAGTGTTGGAATGGAAGGAGGAAAGAAGGGTCGGT
JMSF012M04+ GAGAAGATTTAGGGTTTCAGAGAAGAAGTGTTGGAATGGAAGGAGGAAAGAAGGGTCGGT
JMSF021H13+ GAGAAGATTTAGGGTTTCAGAGAAGAAGTGTTGGAATGGAAGGAGGAAAGAAGGGTCGGT
____________________________________________________________
consensus GAGAAGATTTAGGGTTTCAGAGAAGAAGTGTTGGAATGGAAGGAGGAAAGAAGGGTCGGT
. : . : . : . : . : . :
JMSF039O06+ A
JMFS157E03+ A
JMSF012M04+ AGATTGCGGAGTTTTTCTTTAGGATTTCTACAGTTGTGGTACTTTATTGCCAAACTGATC
JMSF021H13+ AGATTGCGGAGTTTTTCTTTAGGATTTCTACAGTTGTGGTACTTTATTGCCAAACTGATC
____________________________________________________________
consensus AGATTGCGGAGTTTTTCTTTAGGATTTCTACAGTTGTGGTACTTTATTGCCAAACTGATC