Contig 003662:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS006H12Sequence525003662 (6)ref|XP_006345425.1|4e-07PREDICTED: putative zinc transporter At3g08650-like [Solanum tuberosum]
JMFS137B06Sequence491003662 (6)
JMFS157E03Sequence619003662 (6)ref|XP_006345425.1|1e-06PREDICTED: putative zinc transporter At3g08650-like [Solanum tuberosum]
JMSF012M04Sequence507003662 (6)726007193 (3)ref|XP_009776322.1|8e-72PREDICTED: putative zinc transporter At3g08650 [Nicotiana sylvestris] ref|XP_009
JMSF021H13Sequence707003662 (6)ref|XP_011091656.1|1e-11PREDICTED: putative zinc transporter At3g08650 [Sesamum indicum] ref|XP_01109165790007193 (3)ref|XP_009776322.1|1e-74PREDICTED: putative zinc transporter At3g08650 [Nicotiana sylvestris] ref|XP_009
JMSF039O06Sequence689003662 (6)ref|XP_006345425.1|3e-06PREDICTED: putative zinc transporter At3g08650-like [Solanum tuberosum]814007193 (3)ref|XP_009776322.1|2e-79PREDICTED: putative zinc transporter At3g08650 [Nicotiana sylvestris] ref|XP_009

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF039O06+ TCAAGGTCAACAAAGAAGAAC
                      ____________________________________________________________
consensus TCAAGGTCAACAAAGAAGAAC
 
. : . : . : . : . : . :
JMSF039O06+ NGTACTGCACCCAAGCCAGTAGCAGCAGCCATAGCAAGCGTGAAAAACGCAACTGTAGAG
JMFS157E03+ AAAAACGCAACTGTAGAG
JMSF021H13+ AGCCAGTAGCAGCAGCCATAGCAAGCGTGAAAAACGCAACTGTAGAG
                      ____________________________________________________________
consensus NGTACTGCACCCAAGCCAGTAGCAGCAGCCATAGCAAGCGTGAAAAACGCAACTGTAGAG
 
. : . : . : . : . : . :
JMSF039O06+ ACTGAAACCCTATTGTTCCCGCCCCTCAAGTCACCGTTTCCATTACTACCACCATCAGAA
JMFS157E03+ ACTGAAACCCTATTGTTCCCGCCCCTCAAGTCACCGTTTCCATTACTACCACCATCAGAA
JMFS006H12+ AAGTCACCGTTTCCATTTCTACCACCATCAGAA
JMSF021H13+ ACTGAAACCCTATTGTTCCCGCCCCTCAAGTCACCGTTTCCATTACTACCACCATCAGAA
                      ____________________________________________________________
consensus ACTGAAACCCTATTGTTCCCGCCCCTCAAGTCACCGTTTCCATTACTACCACCATCAGAA
 
. : . : . : . : . : . :
JMSF039O06+ GTAAAGGCATACTCTTTACCAGACCCATCTATTACGTTACTTCCAGAATTCGTCAGTGGA
JMFS137B06+ TATTACGTTACTTCCAGAATTCGTCAGTGGA
JMFS157E03+ GTAAAGGCATACTCTTTACCAGACCCATCTATTACGTTACTTCCAGAATTCGTCAGTGGA
JMFS006H12+ GTAAAGGCATACTCTTTACCAGACCCATCTATTACGTTACTTCCAGAATTCGTCAGTGGA
JMSF021H13+ GTAAAGGCATACTCTTTACCAGACCCATCTATTACGTTACTTCCAGAATTCGTCAGTGGA
                      ____________________________________________________________
consensus GTAAAGGCATACTCTTTACCAGACCCATCTATTACGTTACTTCCAGAATTCGTCAGTGGA
 
. : . : . : . : . : . :
JMSF039O06+ GCAGTTACTTTTTGTTTAGTTCCATTTTCAGACTCTGCGGTCACGTGGCCACTCAACACA
JMFS137B06+ GCAGTTACTTTTTGTTTAGTTCCATTTTCAGACTCTGCGGTCACGTGGCCACTCAACACA
JMFS157E03+ GCAGTTACTTTTTGTTTAGTTCCATTTTCAGACTCTGCGGTCACGTGGCCACTCAACACA
JMSF012M04+ TCTGCGGTCACGTGGCCACTCAACACA
JMFS006H12+ GCAGTTACTTTTTGTTTAGTTCCATTTTCAGACTCTGCGGTCACGTGGCCACTCAACACA
JMSF021H13+ GCAGTTACTTTTTGTTTAGTTCCATTTTCAGACTCTGCGGTCACGTGGCCACTCAACACA
                      ____________________________________________________________
consensus GCAGTTACTTTTTGTTTAGTTCCATTTTCAGACTCTGCGGTCACGTGGCCACTCAACACA
 
. : . : . : . : . : . :
JMSF039O06+ GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTCGTAAGT
JMFS137B06+ GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTAGTAAGT
JMFS157E03+ GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTCGTAAGT
JMSF012M04+ GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTCGTAAGT
JMFS006H12+ GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTCGTAAGT
JMSF021H13+ GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTCGTAAGT
                      ____________________________________________________________
consensus GATACAAATAGAAAAATTAAGGTAAAATGTCGGAGTCTCAGTTCCATTATGCTCGTAAGT
 
. : . : . : . : . : . :
JMSF039O06+ GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
JMFS137B06+ GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
JMFS157E03+ GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
JMSF012M04+ GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
JMFS006H12+ GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
JMSF021H13+ GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
                      ____________________________________________________________
consensus GCATCACTAAATCGCGATGGGAATTAAAGATCCTTAAAAGATCGCCAACCAAACTAATGA
 
. : . : . : . : . : . :
JMSF039O06+ TTGATGTAACATACAGCTCTCTAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
JMFS137B06+ TTGATGTAACATACAGCTCTATAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
JMFS157E03+ TTGATGTAACATACAGCTCTATAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
JMSF012M04+ TTGATGTAACATACAGCTCTCTAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
JMFS006H12+ TTGATGTAACATACAGCTCTCTAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
JMSF021H13+ TTGATGTAACATACAGCTCTCTAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
                      ____________________________________________________________
consensus TTGATGTAACATACAGCTCTCTAGTAAACTAGTTTATATAACTATCCTAATCAATTAGCC
 
. : . : . : . : . : . :
JMSF039O06+ AGAATCTGTATCCAACAAATTCTCCTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
JMFS137B06+ AGAATCTGTATCCAACAAATTCTCCTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
JMFS157E03+ AGAATCTGTATCCAACAAATTCTCGTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
JMSF012M04+ AGAATCTGTATCCAACAAATTCTCCTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
JMFS006H12+ AGAATCTGTATCCAACAAATTCTCCTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
JMSF021H13+ AGAATCTGTATCCAACAAATTCTCCTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
                      ____________________________________________________________
consensus AGAATCTGTATCCAACAAATTCTCCTATGAATCAGTTTTTAAGAACTGCTGCATATGAAA
 
. : . : . : . : . : . :
JMSF039O06+ CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGACCAAGTCTGATATAAGATGCTCTTTT
JMFS137B06+ CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGACCAAGTATGATATAAGATGCTCTTTT
JMFS157E03+ CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGACCAAGTCTGATATAAGATGCTCTTTT
JMSF012M04+ CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGACCAAGTCTGATATAAGATGCTCTTTT
JMFS006H12+ CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGTCCAAGTCTGATATAACATGCTCTTTT
JMSF021H13+ CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGACCAAGTCTGATATAAGATGCTCTTTT
                      ____________________________________________________________
consensus CGTTGGGCTGCCCCTTTTATCCGGTTCCCCGAGACCAAGTCTGATATAAGATGCTCTTTT
 
. : . : . : . : . : . :
JMSF039O06+ TCTCAGGCGTGGATCAGGAACCAGAGGGGCAAACCATTGACTGGGTCGTCGGTAGAAGCT
JMFS137B06+ TCTCAGGCGTGGATCAGGAACCAGAGGGGCAAACCATTGACTGGGTCGTCGGTAGAAGCT
JMFS157E03+ TCTCAGGCGTGGATCAGGAACCAGAGGGGCAAACCATTGACTGGGTCGTCGGTAGAAGCT
JMSF012M04+ TCTCAGGCGTGGATCAGGAACCAGAGGGGCAAACCATTGACTGGGTCGTCGGTAGAAGCT
JMFS006H12+ TATCAGGCGTGGATCAG
JMSF021H13+ TCTCAGGCGTGGATCAGGAACCAGAGGGGCAAACCATTGACTGGGTCGTCGGTAGAAGCT
                      ____________________________________________________________
consensus TCTCAGGCGTGGATCAGGAACCAGAGGGGCAAACCATTGACTGGGTCGTCGGTAGAAGCT
 
. : . : . : . : . : . :
JMSF039O06+ GAGAAGATTTAGGGTTTCAGAGAAGAAGTGTTGGAATGGAAGGAGGAAAGAAGGGTCGGT
JMFS137B06+ GACAAGATTTAGGGTTTCAGAGAAGAAGTGTTGGAATGGA
JMFS157E03+ GAGAAGATTTAGGGTTTCAGAGAAGAAGTGTTGGAATGGAAGGAGGAAAGAAGGGTCGGT
JMSF012M04+ GAGAAGATTTAGGGTTTCAGAGAAGAAGTGTTGGAATGGAAGGAGGAAAGAAGGGTCGGT
JMSF021H13+ GAGAAGATTTAGGGTTTCAGAGAAGAAGTGTTGGAATGGAAGGAGGAAAGAAGGGTCGGT
                      ____________________________________________________________
consensus GAGAAGATTTAGGGTTTCAGAGAAGAAGTGTTGGAATGGAAGGAGGAAAGAAGGGTCGGT
 
. : . : . : . : . : . :
JMSF039O06+ A
JMFS157E03+ A
JMSF012M04+ AGATTGCGGAGTTTTTCTTTAGGATTTCTACAGTTGTGGTACTTTATTGCCAAACTGATC
JMSF021H13+ AGATTGCGGAGTTTTTCTTTAGGATTTCTACAGTTGTGGTACTTTATTGCCAAACTGATC
                      ____________________________________________________________
consensus AGATTGCGGAGTTTTTCTTTAGGATTTCTACAGTTGTGGTACTTTATTGCCAAACTGATC