Contig 003661:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS076A08Sequence627003661 (3)ref|XP_009779401.1|7e-25PREDICTED: geranylgeranyl transferase type-2 subunit alpha isoform X2 [Nicotian
JMSF006F01Sequence414003661 (3)ref|XP_009779401.1|9e-33PREDICTED: geranylgeranyl transferase type-2 subunit alpha isoform X2 [Nicotian
JMSF021G15Sequence666003661 (3)ref|XP_009779401.1|5e-29PREDICTED: geranylgeranyl transferase type-2 subunit alpha isoform X2 [Nicotian723011317 (2)ref|XP_004238006.1|5e-62PREDICTED: geranylgeranyl transferase type-2 subunit alpha [Solanum lycopersicu

Alignment

This contig is upended


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JMSF006F01+                               TCCTACGAAGAGTGGAATAAACATACTAGTCTAAGTTCTT
JMSF021G15+                                                                 GTTCTT
                      ____________________________________________________________
consensus                                 TCCTACGAAGAGTGGAATAAACATACTAGTCTAAGTTCTT
 
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JMSF006F01+           CATCGAGAATTGCTTTGATAGACTCGGCATTGTTCTCAGTCTCAGATTGATTAAGTCGGA
JMFS076A08+                           GATAGACTCGGCATTGTTCTCAGTCTCAGATTGATTAAGTCGGA
JMSF021G15+           CATCGAGAATTGCTTTGATAGACTCGGCATTGTTCTCAGTCTCAGATTGATTAAGTCGGA
                      ____________________________________________________________
consensus             CATCGAGAATTGCTTTGATAGACTCGGCATTGTTCTCAGTCTCAGATTGATTAAGTCGGA
 
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JMSF006F01+           GATCTACAGCCAGCTTCCGGTAATTCCAAGCAGTGTAATGCTCCGGATTGGCCTCGAGCA
JMFS076A08+           GATCTACAGCCAGCTTCCGGTAATTCCAAGCAGTGTAATGCTCCGGATTGGCCTCGAGCA
JMSF021G15+           GATCTACAGCCAGCTTCCGGTAATTCCAAGCAGTGTAATGCTCCGGATTGGCCTCGAGCA
                      ____________________________________________________________
consensus             GATCTACAGCCAGCTTCCGGTAATTCCAAGCAGTGTAATGCTCCGGATTGGCCTCGAGCA
 
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JMSF006F01+           GCTTCGCGCTGAGTTCTAGCGCTTCCTTATCATAAATTTTATTGTGATGAAAGTGGATGA
JMFS076A08+           GCTTCGCGCTGAGTTCTAGCGCTTCCTTATCATAAATTTTATTGTGATGAAAGTGGATGA
JMSF021G15+           GCTTCGCGCTGAGTTCTAGCGCTTCCTTATCATAAATTTTATTGTGATGAAAGTGGATGA
                      ____________________________________________________________
consensus             GCTTCGCGCTGAGTTCTAGCGCTTCCTTATCATAAATTTTATTGTGATGAAAGTGGATGA
 
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JMSF006F01+           ACTGAGTTTGAAGAGATCGAAGCTTGGCGGCTTTGATCGCTGAAGCTTCTTGCTCTTCTT
JMFS076A08+           ACTGAGTTTGAAGAGATCGAAGCTTGGCGGCTTTGATCGCTGAAGCTTCTTGCTCTTCTT
JMSF021G15+           ACTGAGTTTGAAGAGATCGAAGCTTGGCGGCTTTGATCGCTGAAGCTTCTTGCTCTTCTT
                      ____________________________________________________________
consensus             ACTGAGTTTGAAGAGATCGAAGCTTGGCGGCTTTGATCGCTGAAGCTTCTTGCTCTTCTT
 
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JMSF006F01+           GGCTTGGAGCTCTTCGTGGTCTTCCATGCATCTTTTCACACAATTTGTGGCCTG      
JMFS076A08+           GGCTTGGAGCTCTTCGTGGTCTTCCATGCATCTTTTCACACAATTTGTGGCCAAAATGTC
JMSF021G15+           GGCTTGGAGCTCTTCGTGGTCTTCCATGCATCTTTTCACACAATTTGTGGCCAAAATGTC
                      ____________________________________________________________
consensus             GGCTTGGAGCTCTTCGTGGTCTTCCATGCATCTTTTCACACAATTTGTGGCCAAAATGTC
 
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JMFS076A08+           CTTGACTATCGCGAAATTATCAATTTGGTCCTCTCAACTTTGTAAACGTTAACTAATATA
JMSF021G15+           CTTGACTATCGCGAAATTATCAATTTGGTCCTCTCAACTTTGTAAACGTTAACTAATATA
                      ____________________________________________________________
consensus             CTTGACTATCGCGAAATTATCAATTTGGTCCTCTCAACTTTGTAAACGTTAACTAATATA
 
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JMFS076A08+           ATCCTCCGTCCTGTCAGGCGTCAAATTTTTGGTTAAGTTGAGGGTAATTACGGAATTTCA
JMSF021G15+           ATCCTCCGTCCTGTCAGGCGTCAAATTTTTGGTTAAGTTGAGGGTAATTACGGAATTTCA
                      ____________________________________________________________
consensus             ATCCTCCGTCCTGTCAGGCGTCAAATTTTTGGTTAAGTTGAGGGTAATTACGGAATTTCA
 
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JMFS076A08+           CTTCAATTGCTGTTTTTCTCCTCTTCAAGCAATGTTCTTCCATTTCTGATTTTCTTCGGT
JMSF021G15+           CTTCAATTGCTGTTTTTCTCCTCTTCAAGCAATGTTCTTCCATTTCTGATTTTCTTCGGT
                      ____________________________________________________________
consensus             CTTCAATTGCTGTTTTTCTCCTCTTCAAGCAATGTTCTTCCATTTCTGATTTTCTTCGGT
 
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JMFS076A08+           GAAGCCACAGTAGAAAAAGGCACAACTGTTCGAGAATCGACTCGAGGGTTTAATTCCAGA
JMSF021G15+           GAAGCCACAGTAGAAAAAGGCACAACTGTTCGAGAATCGACTCGAGGGTTTAATTCCAGA
                      ____________________________________________________________
consensus             GAAGCCACAGTAGAAAAAGGCACAACTGTTCGAGAATCGACTCGAGGGTTTAATTCCAGA
 
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JMFS076A08+           GAGCATCGCCAACTCCCCAAATCTGCTCGAGCTGAAACTGTTCAAAAATTTAGGTTTGGA
JMSF021G15+           GAGCATCGCCAACTCCCCAAATCTGCTCGAGCTGAAACTGTTCAAAAATTTAGGTTTGGA
                      ____________________________________________________________
consensus             GAGCATCGCCAACTCCCCAAATCTGCTCGAGCTGAAACTGTTCAAAAATTTAGGTTTGGA
 
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JMFS076A08+           GAAACTCTGATGAGCCCTTCCTCTCGAACCACTCTGAGCAGTC                 
JMSF021G15+           GAAACTCTGATGAGCCCTTCCTCTCGAACCACTCTGAGCAGTCTAAATGAATCGACGCCC
                      ____________________________________________________________
consensus             GAAACTCTGATGAGCCCTTCCTCTCGAACCACTCTGAGCAGTCTAAATGAATCGACGCCC