| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015E04 | Sequence | 584 | 003658 (7) | ref|XP_004237540.1| | 141 | PREDICTED: protein disulfide isomerase-like 1-4 [Solanum lycopersicum] | 332 | 004264 (7) | ref|XP_003597231.1| | 6e-04 | Protein disulfide isomerase L-2 [Medicago truncatula] gb|AES67482.1| protein dis |
| JMFF027G14 | Sequence | 580 | 003658 (7) | ref|XP_004237540.1| | 143 | PREDICTED: protein disulfide isomerase-like 1-4 [Solanum lycopersicum] | 724 | 004264 (7) | ref|XP_009613613.1| | 318 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] |
| JMFF032C17 | Sequence | 536 | 003658 (7) | ref|XP_004237540.1| | 114 | PREDICTED: protein disulfide isomerase-like 1-4 [Solanum lycopersicum] | 782 | 004264 (7) | ref|XP_009613613.1| | 355 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] |
| JMSF013F16 | Sequence | 478 | 003658 (7) | emb|CDP04357.1| | 8e-18 | unnamed protein product [Coffea canephora] | 773 | 004264 (7) | ref|XP_009613613.1| | 317 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] |
| JMSF021D22 | Sequence | 644 | 003658 (7) | ref|XP_009613613.1| | 180 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] | 781 | 004264 (7) | ref|XP_009613613.1| | 353 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] |
| JMSF021N11 | Sequence | 648 | 003658 (7) | ref|XP_009613613.1| | 206 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] | 746 | 004264 (7) | ref|XP_009613613.1| | 300 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] |
| JMSF031M11 | Sequence | 633 | 003658 (7) | ref|XP_009613613.1| | 197 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] | 682 | 004264 (7) | ref|XP_009613613.1| | 267 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF031M11+ TTGGATAGA
JMSF021N11+ TCAGTTGTTGTTATGTTGGATAGA
____________________________________________________________
consensus TCAGTTGTTGTTATGTTGGATAGA
. : . : . : . : . : . :
JMSF031M11+ GCTGGTCCAGTCTTCTTCTTTATCCATGTAACAATAGCATCTTTGCTCCGTTGGCCATTG
JMSF021N11+ GCTGGTCCAGTCTTCTTCTTTATCCATGTAACAATAGCATCTTTGCTCCGTTGGCCATTG
JMSF021D22+ TCTTTATCCATGTAACAATAGCATCTTTGCTCCGTTGGCCATTG
____________________________________________________________
consensus GCTGGTCCAGTCTTCTTCTTTATCCATGTAACAATAGCATCTTTGCTCCGTTGGCCATTG
. : . : . : . : . : . :
JMSF031M11+ TAGGGCTTGTGAACACCATCAATGAAGAAGTAAATAGTGGGGAAGCCTTGAACGTCGTAC
JMSF021N11+ TAGGGCTTGTGAACACCATCAATGAAGAAGTAAATAGTGGGGAAGCCTTGAACGTCGTAC
JMFF015E04+ CCATCAATGAAGAAGTAAATAGTGGGGAAGCCTTGAACGTCGTAC
JMFF027G14+ CATCAATGAAGAAGTAAATAGTGGGGAAGCCTTGAACGTCGTAC
JMSF021D22+ TAGGGCTTGTGAACACCATCAATGAAGAAGTAAATAGTGGGGAAGCCTTGAACGTCGTAC
____________________________________________________________
consensus TAGGGCTTGTGAACACCATCAATGAAGAAGTAAATAGTGGGGAAGCCTTGAACGTCGTAC
. : . : . : . : . : . :
JMSF031M11+ TTCTGCGCCAGCTCAGCCTCCTCAGAAGCATCCACCTTGGCCAAGGTCACGACCTCGCCC
JMSF021N11+ TTCTGCGCCAGCTCAGCCTCCTCAGAAGCATCCACCTTGGCCAAGGTCACGTCCTCGCCC
JMFF015E04+ TTCTGCGCCAGCTCAGCCTCCTCAGAAGCATCCACCTTGGCCAAGGTCACGTCCTCGCCC
JMFF032C17+ TGCGCCAGCTCAGCCTCCTCAGAAGCATCCACCTTGGCCAAGGTCACGTCCTCGCCC
JMFF027G14+ TTCTGCGCCAGCTCAGCCTCCTCAGAAGCATCCACCTTGGCCAAGGTCACGTCCTCGCCC
JMSF021D22+ TTCTGCGCCAGCTCAGCCTCCTCAGAAGCATCCACCTTGGCCAAGGTCACGTCCTCGCCC
____________________________________________________________
consensus TTCTGCGCCAGCTCAGCCTCCTCAGAAGCATCCACCTTGGCCAAGGTCACGTCCTCGCCC
. : . : . : . : . : . :
JMSF031M11+ TTGAGCTCAGTGGCGGCCGCCGCGTACTCCGGCGCCAAAGCCAGGCAGTGGCCGCACCAG
JMSF021N11+ TTGAGCTCAGTGGCGGCCGCCGCGTACTCCGGCGCCAAAGCCAGGCAGTGGCCGCACCAG
JMFF015E04+ TTGAGCTCAGTGGCGGCCGCCGCGTACTCCGGCGCCAAAGCCAGGCAGTGGCCGCACCAG
JMFF032C17+ TTGAGCTCAGTGGCGGCCGCCGCGTACTCCGGCGCCAAAGCCAGGCAGTGGCCGCACCAG
JMFF027G14+ TTGAGCTCAGTGGCGGCCGCCGCGTACTCCGGCGCCAAAGCCAGGCAGTGGCCGCACCAG
JMSF013F16+ GAGCTCAGTGGCGGCCGCCGCGTACTCCGGCGCCAAAGCCAGGCAGTGGCCGCACCAG
JMSF021D22+ TTGAGCTCAGTGGCGGCCGCCGCGTACTCCGGCGCCAAAGCCAGGCAGTGGCCGCACCAG
____________________________________________________________
consensus TTGAGCTCAGTGGCGGCCGCCGCGTACTCCGGCGCCAAAGCCAGGCAGTGGCCGCACCAG
. : . : . : . : . : . :
JMSF031M11+ GGCGCGTAGAATTCCACCATCACGTACTTATTCTTGGCGATGAAGTCGCTGAAATTCCCC
JMSF021N11+ GGCGCGTAGAATTCCACCATCACGTACTTATTCTTGGCGATGAAGTCGCTGAAATTCCCC
JMFF015E04+ GGCGCGTAGAATTCCACCATCACGTACTTATTCTTGGCGATGAAGTCGCTGAAATTCCCC
JMFF032C17+ GGCGCGTAGAATTCCACCATCACGTACTTATTCTTGGCGATGAAGTCGCTGAAATTCCCC
JMFF027G14+ GGCGCGTAGAATTCCACCATCACGTACTTATTCTTGGCGATGAAGTCGCTGAAATTCCCC
JMSF013F16+ GGCGCGTAGAATTCCACCATCACGTACTTATTCTTGGCGATGAAGTCGCTGAAATTCCCC
JMSF021D22+ GGCGCGTAGAATTCCACCATCACGTACTTATTCTTGGCGATGAAGTCGCTGAAATTCCCC
____________________________________________________________
consensus GGCGCGTAGAATTCCACCATCACGTACTTATTCTTGGCGATGAAGTCGCTGAAATTCCCC
. : . : . : . : . : . :
JMSF031M11+ TCCTTGAGCACCACCACGTCCTTCTCGTCCACGGCGGGCGTCTCGTAGGAGTCGTCGTCG
JMSF021N11+ TCCTTGAGCACCACCACGTCCTTCTCGTCCACGGCGGGCGTCTCGTAGGAGTCGTCGTCG
JMFF015E04+ TCCTTGAGCACCACCACGTCCTTCTCGTCCACGGCGGGCGTCTCGTAGGAGTCGTCGTCG
JMFF032C17+ TCCTTGAGCACCACCACGTCCTTCTCGTCCACGGCGGGCGTCTCGTAGGAGTCGTCGTCG
JMFF027G14+ TCCTTGAGCACCACCACGTCCTTCTCGTCCACGGCGGGCGTCTCGTAGGAGTCGTCGTCG
JMSF013F16+ TCCTTGAGCACCACCACGTCCTTCTCGTCCACGGCGGGCGTCTCGTAGGAGTCGTCGTCG
JMSF021D22+ TCCTTGAGCACCACCACGTCCTTCTCGTCCACGGCGGGCGTCTCGTAGGAGTCGTCGTCG
____________________________________________________________
consensus TCCTTGAGCACCACCACGTCCTTCTCGTCCACGGCGGGCGTCTCGTAGGAGTCGTCGTCG
. : . : . : . : . : . :
JMSF031M11+ TAGCCGTGATCCGTGTCCGCATGGTCGTCCTCGAGGTCGTCGTAGTTCTCGAAGTCAGGC
JMSF021N11+ TAGCCGTGATCCGTGTCCGCATGGTCGTCCTCGAGGTCGTCGTAGTTCTCGAAGTCAGGC
JMFF015E04+ TAGCCGTGATCCGTGTCCGCATGGTCGTCCTCGAGGTCGTCGTAGTTCTCGAAGTCAGGC
JMFF032C17+ TAGCCGTGATCCGTGTCCGCATGGTCGTCCTCGAGGTCGTCGTAGTTCTCGAAGTCAGGC
JMFF027G14+ TAGCCGTGATCCGTGTCCGCATGGTCGTCCTCGAGGTCGTCGTAGTTCTCGAAGTCAGGC
JMSF013F16+ TAGCCGTGATCCGTGTCCGCATGGTCGTCCTCGAGGTCGTCGTAGTTCTCGAAGTCAGGC
JMSF021D22+ TAGCCGTGATCCGTGTCCGCATGGTCGTCCTCGAGGTCGTCGTAGTTCTCGAAGTCAGGC
____________________________________________________________
consensus TAGCCGTGATCCGTGTCCGCATGGTCGTCCTCGAGGTCGTCGTAGTTCTCGAAGTCAGGC
. : . : . : . : . : . :
JMSF031M11+ AGGTGGTCGTAGGGATCGGAATGGGACGAAACGGAGTCGTCGTCCTCGAGAAAGCTGAGG
JMSF021N11+ AGGTGGTCGTAGGGATCGGAATGGGACGAAACGGAGTCGTCGTCCTCGAGAAAGCTGAGG
JMFF015E04+ AGGTGGTCGTAGGGATCGGAATNGGACGAAACGGAGTCGTCGTCCTCGAGAAAGCTGAGG
JMFF032C17+ AGGTGGTCGTAGGGATCGGAATGGGACGAAACGGAGTCGTCGTCCTCGAGAAAGCTGAGG
JMFF027G14+ AGGTGGTCGTAGGGATCGGAATGGGACGAAACGGAGTCGTCGTCCTCGAGAAAGCTGAGG
JMSF013F16+ AGGTGGTCGTAGGGATCGGAATGGGACGAAACGGAGTCGTCGTCCTCGAGAAAGCTGAGG
JMSF021D22+ AGGTGGTCGTAGGGATCGGAATGGGACGAAACGGAGTCGTCGTCCTCGAGAAAGCTGAGG
____________________________________________________________
consensus AGGTGGTCGTAGGGATCGGAATGGGACGAAACGGAGTCGTCGTCCTCGAGAAAGCTGAGG
. : . : . : . : . : . :
JMSF031M11+ TCCTCTTCCTCGTCCGCCGCCGCCGCGGGTTTGCTCTTGGTGTCGGCAGCGCACGACGCC
JMSF021N11+ TCCTCTTCCTCGTCCGCCGCCGCCGCGGGTTTGCTCTTGGTGTCGGCAGCGCACGACGCC
JMFF015E04+ TCCTCTTCCTCGTCCGCCGCCGCCGCGGGTTTGCTCTTGGTGTCGGCAGCGCACGACGCC
JMFF032C17+ TCCTCTTCCTCGTCCGCCGCCGCCGCGGGTTTGCTCTTGGTGTCGGCAGCGCACGACGCC
JMFF027G14+ TCCTCTTCCTCGTCCGCCGCCGCCGCGGGTTTGCTCTTGGTGTCGGCAGCGCACGACGCC
JMSF013F16+ TCCTCTTCCTCGTCCGCCGCCGCCGCGGGTTTGCTCTTGGTGTCGGCAGCGCACGACGCC
JMSF021D22+ TCCTCTTCCTCGTCCGCCGCCGCCGCGGGTTTGCTCTTGGTGTCGGCAGCGCACGACGCC
____________________________________________________________
consensus TCCTCTTCCTCGTCCGCCGCCGCCGCGGGTTTGCTCTTGGTGTCGGCAGCGCACGACGCC
. : . : . : . : . : . :
JMSF031M11+ GTTTGGAAGGAAATGAGGAACAGCAGCAGAATAGATAGGACTGCAATCGATCTCGGGGAA
JMSF021N11+ GTTTGGAAGGAAATGAGGAACAGCAGCAGAATAGATAGGACTGCAATCGATCTCGGGGAA
JMFF015E04+ GTTTGGAAGGAAATGAGGAACAGCAGCAGAATAGATAGGACTGCAATCGATCTCGGGGAA
JMFF032C17+ GTTTGGAAGGAAATGAGGAACAGCAGCAGAATAGATAGGACTGCAATCGATCTCGGGGAA
JMFF027G14+ GTTTGGAAGGAAATGAGGAACAGCAGCAGAATAGATAGGACTGCAATCGATCTCGGGGAA
JMSF013F16+ GTTTGGAAGGAAATGAGGAACAGCAGCAGAATAGATAGGACTGCAATCGATCTCGGGGAA
JMSF021D22+ GTTTGGAAGGAAATGAGGAACAGCAGCAGAATAGATAGGACTGCAATCGATCTCGGGGAA
____________________________________________________________
consensus GTTTGGAAGGAAATGAGGAACAGCAGCAGAATAGATAGGACTGCAATCGATCTCGGGGAA
. : . : . : . : . : . :
JMSF031M11+ GCCATTGTAGAGAGCTGACAGAC
JMSF021N11+ GCCATTGTAGAGAGCTGACAGAC
JMFF015E04+ GCCATTGTAGAGAGCTGACAGACAACTCAAGTGGTGTGAAGTGAACGTTTTTTATT
JMFF032C17+ GCCATTGTAGAGAGCTGACAGACAACTCAAGTGGTGTGAAGTGAACGTTCTTTATT
JMFF027G14+ GCCATTGTAGAGAGCTGACAGACAACTCAAGTGGTGTGAAGTGAACGTTCTTTATT
JMSF013F16+ GCCATTGTAGAGAGCTGACAGACAACTCAAGTGGTGTGAAGTGAACGTTTTTTATT
JMSF021D22+ GCCATTGTAGAGAGCTGACAGACAACTCAAGTGGTGTGAAGTGAACGTTTTTTATTACCC
____________________________________________________________
consensus GCCATTGTAGAGAGCTGACAGACAACTCAAGTGGTGTGAAGTGAACGTTTTTTATTACCC