Contig 003656:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021B06Sequence711003656 (2)ref|XP_002302737.1|4e-21mitochondrial substrate carrier family protein [Populus trichocarpa] gb|EEE82010740003656 (2)ref|XP_010559180.1|2e-32PREDICTED: nicotinamide adenine dinucleotide transporter 1, chloroplastic [Tare

Alignment

This contig is upended


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rJMSF021B06-                                                     ATCCTTTCCAGGGAATA
                      ____________________________________________________________
consensus                                                        ATCCTTTCCAGGGAATA
 
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rJMSF021B06-          ATTCAGGAATATTGCTACAGTAACTAGTTCTATGCAAATGAAAAGGGAAAAAGAAAATAA
                      ____________________________________________________________
consensus             ATTCAGGAATATTGCTACAGTAACTAGTTCTATGCAAATGAAAAGGGAAAAAGAAAATAA
 
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rJMSF021B06-          CGAAGTACCCCGATTAGCCAAATATATCTTGATCTTCTCATATGTTGGAAACTGGATAGC
                      ____________________________________________________________
consensus             CGAAGTACCCCGATTAGCCAAATATATCTTGATCTTCTCATATGTTGGAAACTGGATAGC
 
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rJMSF021B06-          AACATGACTAATACCCGCTAGAGCAGTCACAAGACCACTGACAACAATGAAAACATAAGT
                      ____________________________________________________________
consensus             AACATGACTAATACCCGCTAGAGCAGTCACAAGACCACTGACAACAATGAAAACATAAGT
 
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rJMSF021B06-          GATCAACAAGCTTAACTACCTATGTGATGCATAATTCAAACATTCAAATAGAAGAATAAC
                      ____________________________________________________________
consensus             GATCAACAAGCTTAACTACCTATGTGATGCATAATTCAAACATTCAAATAGAAGAATAAC
 
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rJMSF021B06-          CCTAGAATGCCCTTTTCACGAGCTATTCTTCTTAGAGCCGATAATGTACCCCGACAACAC
JMSF021B06+                                                                ACAACAC
                      ____________________________________________________________
consensus             CCTAGAATGCCCTTTTCACGAGCTATTCTTCTTAGAGCCGATAATGTACCCCGACAACAC
 
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rJMSF021B06-          CAGCTCTCATTCCTTGAGTCTGAAGTCTAGTCTTCACAACCCAAAGAGGATTTGTGGCAA
JMSF021B06+           CAGCTCTCATTCCTTGAGTCTGAAGTCTAGTCTTCACAACCCAAAGAGGATTTGTGGCAA
                      ____________________________________________________________
consensus             CAGCTCTCATTCCTTGAGTCTGAAGTCTAGTCTTCACAACCCAAAGAGGATTTGTGGCAA
 
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rJMSF021B06-          TTGTAGTTGCAGCCCCAGCAGCAGCAGCAGCAAGCATGTTGGCACCAATAGAAAGTTTAT
JMSF021B06+           TTGTAGTTGCAGCCCCAGCAGCAGCAGCAGCAAGCATGTTGGCACCAATAGAAAGTTTAT
                      ____________________________________________________________
consensus             TTGTAGTTGCAGCCCCAGCAGCAGCAGCAGCAAGCATGTTGGCACCAATAGAAAGTTTAT
 
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rJMSF021B06-          GTCTTTCATCATCAGAGCAAAGAAAAGATTTCAGCTGCTCATAAATAGTAAAATAAACC 
JMSF021B06+           GTCTTTCATCATCAGAGCAAAGAAAAGATTTCAGCTGCTCATAAATAGTAAAATAAACCA
                      ____________________________________________________________
consensus             GTCTTTCATCATCAGAGCAAAGAAAAGATTTCAGCTGCTCATAAATAGTAAAATAAACCA
 
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JMSF021B06+           TCAAGCTCTCCACCAGCCACATCATGTTGCATCAAGTAATCATGATTTTCATACCCCAAG
                      ____________________________________________________________
consensus             TCAAGCTCTCCACCAGCCACATCATGTTGCATCAAGTAATCATGATTTTCATACCCCAAG
 
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JMSF021B06+           TCTGATCTACCACCAACAAGAACATCAAAACCGGGCAAGGACTCTAACAACTCTTCCCTC
                      ____________________________________________________________
consensus             TCTGATCTACCACCAACAAGAACATCAAAACCGGGCAAGGACTCTAACAACTCTTCCCTC
 
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JMSF021B06+           TCCACATCATCATCCAACTTCATCATCTCCGGGTATTTTCATCTGCTGCTCTTTTTGGAT
                      ____________________________________________________________
consensus             TCCACATCATCATCCAACTTCATCATCTCCGGGTATTTTCATCTGCTGCTCTTTTTGGAT
 
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JMSF021B06+           TAGTTTTAAATGAATTAGGATGTGTTTCAACGACGGTACACAGGATCAGACCGGGGCGAG
                      ____________________________________________________________
consensus             TAGTTTTAAATGAATTAGGATGTGTTTCAACGACGGTACACAGGATCAGACCGGGGCGAG
 
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JMSF021B06+           GCTGAGTTGTGAGTGTCGAAGGATGCACAGGACTCGCATCTTGTATACGCTGTAGATGAA
                      ____________________________________________________________
consensus             GCTGAGTTGTGAGTGTCGAAGGATGCACAGGACTCGCATCTTGTATACGCTGTAGATGAA
 
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JMSF021B06+           GATGAGAGAGTCGCTAAGTACGGACTACCGTTGCCCACTCAGCCCTGGTCTCGTCGTCGC
                      ____________________________________________________________
consensus             GATGAGAGAGTCGCTAAGTACGGACTACCGTTGCCCACTCAGCCCTGGTCTCGTCGTCGC
 
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JMSF021B06+           CCAAGTTTGAGGGGAATTGAAGTTGGGAGACGGTGGTTGTGATTTGTGAATCAGAGACTC
                      ____________________________________________________________
consensus             CCAAGTTTGAGGGGAATTGAAGTTGGGAGACGGTGGTTGTGATTTGTGAATCAGAGACTC