Contig 003654:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009H23Sequence625003654 (2)emb|CDP03700.1|2e-105unnamed protein product [Coffea canephora]
JMSF020N01Sequence686003654 (2)emb|CDP03700.1|3e-70unnamed protein product [Coffea canephora]732016090ref|XP_009793325.1|3e-73PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X2 [Nicotiana sylvest

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN009H23+ GTTAGGA
                      ____________________________________________________________
consensus GTTAGGA
 
. : . : . : . : . : . :
JMFN009H23+ TCATCGTTACTCTTTTCATATTGAACTTTAAATTTCTGTCCCTGCTCTTTGACCTTAGAT
                      ____________________________________________________________
consensus TCATCGTTACTCTTTTCATATTGAACTTTAAATTTCTGTCCCTGCTCTTTGACCTTAGAT
 
. : . : . : . : . : . :
JMFN009H23+ TTTCGGACATGTCCATCATTGTCAGAGGCATGTGGAGGTTCAGGTTTTGCAGCAGAACCT
                      ____________________________________________________________
consensus TTTCGGACATGTCCATCATTGTCAGAGGCATGTGGAGGTTCAGGTTTTGCAGCAGAACCT
 
. : . : . : . : . : . :
JMFN009H23+ TGTGACGTAAACCTTGAAGACTTGCTCCGGTTTGCAGCTTCCACCAAACAATTTAAAGGT
                      ____________________________________________________________
consensus TGTGACGTAAACCTTGAAGACTTGCTCCGGTTTGCAGCTTCCACCAAACAATTTAAAGGT
 
. : . : . : . : . : . :
JMFN009H23+ TTCCATAAATCAACTTTCCCATCCCACTGTTCAATGCCATTATCTGTTTCTTTAAGAGAT
                      ____________________________________________________________
consensus TTCCATAAATCAACTTTCCCATCCCACTGTTCAATGCCATTATCTGTTTCTTTAAGAGAT
 
. : . : . : . : . : . :
JMFN009H23+ GCAAGGCTTGATGGCTCAGCATTGGAAGTGTTCTGTCTTACATTCTGGGTAAATTTGTTC
                      ____________________________________________________________
consensus GCAAGGCTTGATGGCTCAGCATTGGAAGTGTTCTGTCTTACATTCTGGGTAAATTTGTTC
 
. : . : . : . : . : . :
JMFN009H23+ AGGGTCTCAGGTGAGTTAGAGCTTTCAGGTTGATCTTCAATATCAGCTTCCTCTTTCTTC
                      ____________________________________________________________
consensus AGGGTCTCAGGTGAGTTAGAGCTTTCAGGTTGATCTTCAATATCAGCTTCCTCTTTCTTC
 
. : . : . : . : . : . :
JMFN009H23+ ATAGGTTTCTCAATAGAAAAACTGGAACCACGTAATGATTTTCTAGCGACAGATTTTGAT
                      ____________________________________________________________
consensus ATAGGTTTCTCAATAGAAAAACTGGAACCACGTAATGATTTTCTAGCGACAGATTTTGAT
 
. : . : . : . : . : . :
JMFN009H23+ CTTCTTCCAGTCATTCCAGATTGTGTTGACACTCTGGGGGTATTTACCACTAATGAAGAA
JMSF020N01+ TGGGGGTATTTACCACTAATGAAGAA
                      ____________________________________________________________
consensus CTTCTTCCAGTCATTCCAGATTGTGTTGACACTCTGGGGGTATTTACCACTAATGAAGAA
 
. : . : . : . : . : . :
JMFN009H23+ AGTGATCGCTCCTTTCTCTTCACTGGTAACATAACTGAAGGCACAACTTCAGGTGCCATC
JMSF020N01+ AGTGATCGCTCCTTTCTCTTCACTGGTAACATAACTGAAGGCACAACTTCAGGTGCCATC
                      ____________________________________________________________
consensus AGTGATCGCTCCTTTCTCTTCACTGGTAACATAACTGAAGGCACAACTTCAGGTGCCATC
 
. : . : . : . : . : . :
JMFN009H23+ ACTTTTCGCCTCTTATATGGGAAAATCTTTGCCCTTACATCTTGCACATTATGATCTGCC
JMSF020N01+ ACTTTTCGCCTCTTATATGGGAAAATCTTTGCCCTTACATCTTGCACATTATGATCTGCC
                      ____________________________________________________________
consensus ACTTTTCGCCTCTTATATGGGAAAATCTTTGCCCTTACATCTTGCACATTATGATCTGCC
 
. : . : . : . : . : . :
JMFN009H23+ CTCAGTTTCTCAAGTGGG
JMSF020N01+ CTCAGTTTCTCAAGTGGGACACAGCCTAAATCAATGTTACATATTGGGCAACACTCCATC
                      ____________________________________________________________
consensus CTCAGTTTCTCAAGTGGGACACAGCCTAAATCAATGTTACATATTGGGCAACACTCCATC
 
. : . : . : . : . : . :
JMSF020N01+ TCCTCGTCTGAGAGCTTCTTATAAATGCATCTCCTGCAAAATGTATGAAGGCATTCCGAA
                      ____________________________________________________________
consensus TCCTCGTCTGAGAGCTTCTTATAAATGCATCTCCTGCAAAATGTATGAAGGCATTCCGAA
 
. : . : . : . : . : . :
JMSF020N01+ ATGGTAGTAGCATCTCTGAAGAGCTTATTGCAAAGAGGACATGTCATGCATGCCGCAATC
                      ____________________________________________________________
consensus ATGGTAGTAGCATCTCTGAAGAGCTTATTGCAAAGAGGACATGTCATGCATGCCGCAATC
 
. : . : . : . : . : . :
JMSF020N01+ GTTTCTCTCCTCACTTTCACAACTTGATTCGACATCTCTCTCTGTCTGACTGACTACCTG
                      ____________________________________________________________
consensus GTTTCTCTCCTCACTTTCACAACTTGATTCGACATCTCTCTCTGTCTGACTGACTACCTG
 
. : . : . : . : . : . :
JMSF020N01+ TTCTCCGTTCTCGTTCGTCGTCTTCCAAAAACAAAGCCCCGATTCAGAACCTCCGAAACC
                      ____________________________________________________________
consensus TTCTCCGTTCTCGTTCGTCGTCTTCCAAAAACAAAGCCCCGATTCAGAACCTCCGAAACC
 
. : . : . : . : . : . :
JMSF020N01+ TCAACGTGATTAGGCGGTGCATGTTAGCAACGACACATGAAACGTGAAATTTACGTCCAT
                      ____________________________________________________________
consensus TCAACGTGATTAGGCGGTGCATGTTAGCAACGACACATGAAACGTGAAATTTACGTCCAT
 
. : . : . : . : . : . :
JMSF020N01+ TCCCCGTCTCGAATCTGGGAATCGGCGAGCTAAAGCGGCTCCGGCGGATTTGATTTGGGA
                      ____________________________________________________________
consensus TCCCCGTCTCGAATCTGGGAATCGGCGAGCTAAAGCGGCTCCGGCGGATTTGATTTGGGA
 
. : . : . : . : . : . :
JMSF020N01+ AAAACGGAAGCTGAGCCGGCGACGGATTTGGGTCCGGCGGTGGGTGGCCGATGATCTGTG
                      ____________________________________________________________
consensus AAAACGGAAGCTGAGCCGGCGACGGATTTGGGTCCGGCGGTGGGTGGCCGATGATCTGTG
 
. : . : . : . : . : . :
JMSF020N01+ AGTATGCGTTGGATTAGGACTTGGGAGACGAAATCCACAGCGGCTTCACTCACAATGCCC
                      ____________________________________________________________
consensus AGTATGCGTTGGATTAGGACTTGGGAGACGAAATCCACAGCGGCTTCACTCACAATGCCC