Contig 003654:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009H23Sequence625003654 (2)emb|CDP03700.1|2e-105unnamed protein product [Coffea canephora]
JMSF020N01Sequence686003654 (2)emb|CDP03700.1|3e-70unnamed protein product [Coffea canephora]732016090ref|XP_009793325.1|3e-73PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X2 [Nicotiana sylvest

Alignment

This contig is upended


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JMFN009H23+                                                                GTTAGGA
                      ____________________________________________________________
consensus                                                                  GTTAGGA
 
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JMFN009H23+           TCATCGTTACTCTTTTCATATTGAACTTTAAATTTCTGTCCCTGCTCTTTGACCTTAGAT
                      ____________________________________________________________
consensus             TCATCGTTACTCTTTTCATATTGAACTTTAAATTTCTGTCCCTGCTCTTTGACCTTAGAT
 
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JMFN009H23+           TTTCGGACATGTCCATCATTGTCAGAGGCATGTGGAGGTTCAGGTTTTGCAGCAGAACCT
                      ____________________________________________________________
consensus             TTTCGGACATGTCCATCATTGTCAGAGGCATGTGGAGGTTCAGGTTTTGCAGCAGAACCT
 
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JMFN009H23+           TGTGACGTAAACCTTGAAGACTTGCTCCGGTTTGCAGCTTCCACCAAACAATTTAAAGGT
                      ____________________________________________________________
consensus             TGTGACGTAAACCTTGAAGACTTGCTCCGGTTTGCAGCTTCCACCAAACAATTTAAAGGT
 
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JMFN009H23+           TTCCATAAATCAACTTTCCCATCCCACTGTTCAATGCCATTATCTGTTTCTTTAAGAGAT
                      ____________________________________________________________
consensus             TTCCATAAATCAACTTTCCCATCCCACTGTTCAATGCCATTATCTGTTTCTTTAAGAGAT
 
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JMFN009H23+           GCAAGGCTTGATGGCTCAGCATTGGAAGTGTTCTGTCTTACATTCTGGGTAAATTTGTTC
                      ____________________________________________________________
consensus             GCAAGGCTTGATGGCTCAGCATTGGAAGTGTTCTGTCTTACATTCTGGGTAAATTTGTTC
 
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JMFN009H23+           AGGGTCTCAGGTGAGTTAGAGCTTTCAGGTTGATCTTCAATATCAGCTTCCTCTTTCTTC
                      ____________________________________________________________
consensus             AGGGTCTCAGGTGAGTTAGAGCTTTCAGGTTGATCTTCAATATCAGCTTCCTCTTTCTTC
 
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JMFN009H23+           ATAGGTTTCTCAATAGAAAAACTGGAACCACGTAATGATTTTCTAGCGACAGATTTTGAT
                      ____________________________________________________________
consensus             ATAGGTTTCTCAATAGAAAAACTGGAACCACGTAATGATTTTCTAGCGACAGATTTTGAT
 
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JMFN009H23+           CTTCTTCCAGTCATTCCAGATTGTGTTGACACTCTGGGGGTATTTACCACTAATGAAGAA
JMSF020N01+                                             TGGGGGTATTTACCACTAATGAAGAA
                      ____________________________________________________________
consensus             CTTCTTCCAGTCATTCCAGATTGTGTTGACACTCTGGGGGTATTTACCACTAATGAAGAA
 
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JMFN009H23+           AGTGATCGCTCCTTTCTCTTCACTGGTAACATAACTGAAGGCACAACTTCAGGTGCCATC
JMSF020N01+           AGTGATCGCTCCTTTCTCTTCACTGGTAACATAACTGAAGGCACAACTTCAGGTGCCATC
                      ____________________________________________________________
consensus             AGTGATCGCTCCTTTCTCTTCACTGGTAACATAACTGAAGGCACAACTTCAGGTGCCATC
 
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JMFN009H23+           ACTTTTCGCCTCTTATATGGGAAAATCTTTGCCCTTACATCTTGCACATTATGATCTGCC
JMSF020N01+           ACTTTTCGCCTCTTATATGGGAAAATCTTTGCCCTTACATCTTGCACATTATGATCTGCC
                      ____________________________________________________________
consensus             ACTTTTCGCCTCTTATATGGGAAAATCTTTGCCCTTACATCTTGCACATTATGATCTGCC
 
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JMFN009H23+           CTCAGTTTCTCAAGTGGG                                          
JMSF020N01+           CTCAGTTTCTCAAGTGGGACACAGCCTAAATCAATGTTACATATTGGGCAACACTCCATC
                      ____________________________________________________________
consensus             CTCAGTTTCTCAAGTGGGACACAGCCTAAATCAATGTTACATATTGGGCAACACTCCATC
 
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JMSF020N01+           TCCTCGTCTGAGAGCTTCTTATAAATGCATCTCCTGCAAAATGTATGAAGGCATTCCGAA
                      ____________________________________________________________
consensus             TCCTCGTCTGAGAGCTTCTTATAAATGCATCTCCTGCAAAATGTATGAAGGCATTCCGAA
 
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JMSF020N01+           ATGGTAGTAGCATCTCTGAAGAGCTTATTGCAAAGAGGACATGTCATGCATGCCGCAATC
                      ____________________________________________________________
consensus             ATGGTAGTAGCATCTCTGAAGAGCTTATTGCAAAGAGGACATGTCATGCATGCCGCAATC
 
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JMSF020N01+           GTTTCTCTCCTCACTTTCACAACTTGATTCGACATCTCTCTCTGTCTGACTGACTACCTG
                      ____________________________________________________________
consensus             GTTTCTCTCCTCACTTTCACAACTTGATTCGACATCTCTCTCTGTCTGACTGACTACCTG
 
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JMSF020N01+           TTCTCCGTTCTCGTTCGTCGTCTTCCAAAAACAAAGCCCCGATTCAGAACCTCCGAAACC
                      ____________________________________________________________
consensus             TTCTCCGTTCTCGTTCGTCGTCTTCCAAAAACAAAGCCCCGATTCAGAACCTCCGAAACC
 
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JMSF020N01+           TCAACGTGATTAGGCGGTGCATGTTAGCAACGACACATGAAACGTGAAATTTACGTCCAT
                      ____________________________________________________________
consensus             TCAACGTGATTAGGCGGTGCATGTTAGCAACGACACATGAAACGTGAAATTTACGTCCAT
 
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JMSF020N01+           TCCCCGTCTCGAATCTGGGAATCGGCGAGCTAAAGCGGCTCCGGCGGATTTGATTTGGGA
                      ____________________________________________________________
consensus             TCCCCGTCTCGAATCTGGGAATCGGCGAGCTAAAGCGGCTCCGGCGGATTTGATTTGGGA
 
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JMSF020N01+           AAAACGGAAGCTGAGCCGGCGACGGATTTGGGTCCGGCGGTGGGTGGCCGATGATCTGTG
                      ____________________________________________________________
consensus             AAAACGGAAGCTGAGCCGGCGACGGATTTGGGTCCGGCGGTGGGTGGCCGATGATCTGTG
 
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JMSF020N01+           AGTATGCGTTGGATTAGGACTTGGGAGACGAAATCCACAGCGGCTTCACTCACAATGCCC
                      ____________________________________________________________
consensus             AGTATGCGTTGGATTAGGACTTGGGAGACGAAATCCACAGCGGCTTCACTCACAATGCCC