Contig 003650:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008N11Sequence287003650 (2)ref|XP_004252009.1|2e-08PREDICTED: arginine/serine-rich coiled-coil protein 2 isoform X1 [Solanum lycop750011252 (3)ref|XP_009629875.1|2e-63PREDICTED: arginine/serine-rich coiled-coil protein 2 isoform X2 [Nicotiana tom
JMSF019P15Sequence473003650 (2)ref|XP_004252009.1|3e-08PREDICTED: arginine/serine-rich coiled-coil protein 2 isoform X1 [Solanum lycop788011252 (3)ref|XP_009629875.1|2e-71PREDICTED: arginine/serine-rich coiled-coil protein 2 isoform X2 [Nicotiana tom

Alignment

This contig is upended


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JMSF019P15+                  ATCTTCATTCCTGCTATGTCTNGTATACTCATCATGCCTGCGGTGACTATGAG
                      ____________________________________________________________
consensus                    ATCTTCATTCCTGCTATGTCTNGTATACTCATCATGCCTGCGGTGACTATGAG
 
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JMSF019P15+           TACTCCTAGAGGATTGTCGATCAGAATGTCTGTGTGACTCACCACTCCTGCCATGTTGAC
                      ____________________________________________________________
consensus             TACTCCTAGAGGATTGTCGATCAGAATGTCTGTGTGACTCACCACTCCTGCCATGTTGAC
 
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JMSF019P15+           TCCTACCAGAGTCTCTCCCTAAATCCCTTCCATCATCCTTCCTTCGCTGAGAATCATCAT
                      ____________________________________________________________
consensus             TCCTACCAGAGTCTCTCCCTAAATCCCTTCCATCATCCTTCCTTCGCTGAGAATCATCAT
 
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JMSF008N11+                    AAGCTTCAGTTGGTGGAACTGGACTCAAGCTCCTCTCATGGGCAGGACTAC
JMSF019P15+           TTTTTTCACAAGCTTCAGTTGGTGGAACTGGACTCAAGCTCCTCTCATGGGCAGGACTAC
                      ____________________________________________________________
consensus             TTTTTTCACAAGCTTCAGTTGGTGGAACTGGACTCAAGCTCCTCTCATGGGCAGGACTAC
 
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JMSF008N11+           CGTCCGAGGATGATTCGCCAACTGGAGACCGACGTCGATATTTCCGATTAGCAGCATCGT
JMSF019P15+           CGTCCGAGGATGATTCGCCAACTGGAGACCGACGTCGATATTTCCGATTAGCAGCATCGT
                      ____________________________________________________________
consensus             CGTCCGAGGATGATTCGCCAACTGGAGACCGACGTCGATATTTCCGATTAGCAGCATCGT
 
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JMSF008N11+           TGGACGGCCTGCGAAAAGCACCGGCAGCACCAACCTTCTCCCGGGCTGAATTGTGCCCAT
JMSF019P15+           TGGACGGCCTGCGAAAAGCACCGGCAGCACCAACCTTCTCCCGGGCTGAATTGTGCCCAT
                      ____________________________________________________________
consensus             TGGACGGCCTGCGAAAAGCACCGGCAGCACCAACCTTCTCCCGGGCTGAATTGTGCCCAT
 
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JMSF008N11+           CCGAGTCCATAGTTAAACCTAAAACCTTAATCCGTAGATATATCCCTTGTGAATGAATGC
JMSF019P15+           CCGAGTCCATAGTTAAACCTAAAACCTTAATCCGTAGATATATCCCTTGTGAATGAATGC
                      ____________________________________________________________
consensus             CCGAGTCCATAGTTAAACCTAAAACCTTAATCCGTAGATATATCCCTTGTGAATGAATGC
 
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JMSF008N11+           ACTCTTCGAAATTTCGAATTTGATTTTTGAGTCGCTTGGAGACGAAGCTGAGAAT     
JMSF019P15+           ACTCTTCGAAATTTCGAATTTGATTTTTGAGTCGCTTGGAGACGAAGCTGAGAATAATTC
                      ____________________________________________________________
consensus             ACTCTTCGAAATTTCGAATTTGATTTTTGAGTCGCTTGGAGACGAAGCTGAGAATAATTC