Contig 003649:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019N15Sequence496003649 (2)gb|KDO63181.1|2e-60hypothetical protein CISIN_1g029107mg [Citrus sinensis]728003649 (2)ref|XP_009765801.1|6e-87PREDICTED: histone chaperone ASF1B-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF019N15- A
                      ____________________________________________________________
consensus A
 
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rJMSF019N15- ATGGTAAAACCTGGGTTTTTTTAAAAAAAAAACATGGTACATGCACCTGATCCGATTAAT
                      ____________________________________________________________
consensus ATGGTAAAACCTGGGTTTTTTTAAAAAAAAAACATGGTACATGCACCTGATCCGATTAAT
 
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rJMSF019N15- GAATTCTAGCCACTTACAAACGAAACAAAAGATTTAGTTCAAGATGCTTTAGCACACCAC
                      ____________________________________________________________
consensus GAATTCTAGCCACTTACAAACGAAACAAAAGATTTAGTTCAAGATGCTTTAGCACACCAC
 
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rJMSF019N15- TATCTTCATGCCATAAACACAGTAAGATTGGTGTGACAGACAAAAACAGAGTTACATAGC
                      ____________________________________________________________
consensus TATCTTCATGCCATAAACACAGTAAGATTGGTGTGACAGACAAAAACAGAGTTACATAGC
 
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rJMSF019N15- AATTCTACAAGATGATGAAGAGCTACAGACCCCTCAAACTGAGATGTAAGAAAAGAAGAT
                      ____________________________________________________________
consensus AATTCTACAAGATGATGAAGAGCTACAGACCCCTCAAACTGAGATGTAAGAAAAGAAGAT
 
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rJMSF019N15- GGTTAATGTCCCTGTCCATCATTGGTGTGGTTTTGAGTCAAACAAGGCAGCTCTTCTTCA
                      ____________________________________________________________
consensus GGTTAATGTCCCTGTCCATCATTGGTGTGGTTTTGAGTCAAACAAGGCAGCTCTTCTTCA
 
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rJMSF019N15- TTTCCTTCTGCTCCAGTCACATGATCAGGTGGAGGGGTTTGTTCACTGCTTTCATTATTT
                      ____________________________________________________________
consensus TTTCCTTCTGCTCCAGTCACATGATCAGGTGGAGGGGTTTGTTCACTGCTTTCATTATTT
 
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rJMSF019N15- TCAGGGTGGAAGTTAATGGGGAACTTTGTTACTCTAGGCTTGTCCGATAGTATGTTTCTT
                      ____________________________________________________________
consensus TCAGGGTGGAAGTTAATGGGGAACTTTGTTACTCTAGGCTTGTCCGATAGTATGTTTCTT
 
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rJMSF019N15- TGAACCCTGTCAACTAATACCTTCTGTGGCGGTTCTTCTCTCAGCTGCTCATCGTCGTAA
                      ____________________________________________________________
consensus TGAACCCTGTCAACTAATACCTTCTGTGGCGGTTCTTCTCTCAGCTGCTCATCGTCGTAA
 
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rJMSF019N15- TCATTGTTCACATAGTACCCCACTCGTACAAATTCCTGGTTCAAATAGGAGCCGGTCAAC
JMSF019N15+ ATAGGAGCCGGTCAAC
                      ____________________________________________________________
consensus TCATTGTTCACATAGTACCCCACTCGTACAAATTCCTGGTTCAAATAGGAGCCGGTCAAC
 
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rJMSF019N15- AGAAGGACAGTCACACCGATTATATCTTCTTCCCGGATTTTTGAGGGATCCGGGGGGTCT
JMSF019N15+ AGAAGGACAGTCACACCGATTATATCTTCTTCCCGGATTTTTGAGGGATCCGGGGGGTCT
                      ____________________________________________________________
consensus AGAAGGACAGTCACACCGATTATATCTTCTTCCCGGATTTTTGAGGGATCCGGGGGGTCT
 
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rJMSF019N15- GCTTGCAAGATAAAACGGTAGTTTCCAATATTAACTGGCCCAACAAGGACACTTTCAAGA
JMSF019N15+ GCTTGCAAGATAAAACGGTAGTTTCCAATATTAACTGGCCCAACAAGGACACTTTCAAGA
                      ____________________________________________________________
consensus GCTTGCAAGATAAAACGGTAGTTTCCAATATTAACTGGCCCAACAAGGACACTTTCAAGA
 
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rJMSF019N15- AGTTGATCATAAGTTTCATCCTCAGCGGATCCAACATAGATAAGTTTCCATTCCAAATCG
JMSF019N15+ AGTTGATCATAAGTTTCATCCTCAGCGGATCCAACATAGATAAGTTTCCATTCCAAATCG
                      ____________________________________________________________
consensus AGTTGATCATAAGTTTCATCCTCAGCGGATCCAACATAGATAAGTTTCCATTCCAAATCG
 
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rJMSF019N15- TCTTTGA
JMSF019N15+ TCTTTGAGAGGAGCGACGCACTCGTAGGAGATTTCAAACTGGAAAGGGGACAAAAACGGC
                      ____________________________________________________________
consensus TCTTTGAGAGGAGCGACGCACTCGTAGGAGATTTCAAACTGGAAAGGGGACAAAAACGGC
 
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JMSF019N15+ GCCGGATTGTCCAACACAGACACGTTCGTGAGGTTCACTGCGCTCATTGTATTGAAGCAA
                      ____________________________________________________________
consensus GCCGGATTGTCCAACACAGACACGTTCGTGAGGTTCACTGCGCTCATTGTATTGAAGCAA
 
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JMSF019N15+ CTAGTGGCGAAAAGCTCTGTATGTTCTCGGAGTCCTTAGCCTGAGATTTCTGGAAGACGA
                      ____________________________________________________________
consensus CTAGTGGCGAAAAGCTCTGTATGTTCTCGGAGTCCTTAGCCTGAGATTTCTGGAAGACGA
 
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JMSF019N15+ TTAGGGATTCAGAAACCTTCATGGAATCCTTCAAAATGCTACGAGGGTTGCTAAGGAAAG
                      ____________________________________________________________
consensus TTAGGGATTCAGAAACCTTCATGGAATCCTTCAAAATGCTACGAGGGTTGCTAAGGAAAG
 
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JMSF019N15+ GCCAGCAGGAGAAAAATATTTGAACAAGACGACGACGATGAGTGTGGGAAGAGCTCGGTC
                      ____________________________________________________________
consensus GCCAGCAGGAGAAAAATATTTGAACAAGACGACGACGATGAGTGTGGGAAGAGCTCGGTC