Contig 003648:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS073E06Sequence627003648 (2)gb|AFW55791.1|8e-121putative clathrin heavy chain family protein [Zea mays]
JMSF019L16Sequence506003648 (2)gb|EPS62652.1|4e-36hypothetical protein M569_12138, partial [Genlisea aurea]

Alignment

This contig is upended


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JMFS073E06+                                                             AATAGTTGCA
                      ____________________________________________________________
consensus                                                               AATAGTTGCA
 
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JMFS073E06+           TGTTTCCTTTGACAAGTTGAGGTCTCTCTGGTGATCCTGGAGCAATCCCAATCAAAACCA
                      ____________________________________________________________
consensus             TGTTTCCTTTGACAAGTTGAGGTCTCTCTGGTGATCCTGGAGCAATCCCAATCAAAACCA
 
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JMFS073E06+           AACATTTCTCTGAAGGATCACATCGATAATTGATTATTTGGTTGTTGGACAAATTTGCTG
                      ____________________________________________________________
consensus             AACATTTCTCTGAAGGATCACATCGATAATTGATTATTTGGTTGTTGGACAAATTTGCTG
 
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JMFS073E06+           TTCTGTCAAACATCTTTACTGGCTCAGAATCCCCTTCAATTGGCCAATGATAAACAGAGG
                      ____________________________________________________________
consensus             TTCTGTCAAACATCTTTACTGGCTCAGAATCCCCTTCAATTGGCCAATGATAAACAGAGG
 
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JMFS073E06+           TTAGCGTGACCAGGCCTAACATCTTAGGTGTAATCCATTTCCAGAAAACAACCTGTTCAG
                      ____________________________________________________________
consensus             TTAGCGTGACCAGGCCTAACATCTTAGGTGTAATCCATTTCCAGAAAACAACCTGTTCAG
 
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JMFS073E06+           GCATCTGATGCGATTTGATTTTTTGTTTTGCTTCGATATTGAATATTTGTAAATGATCTT
                      ____________________________________________________________
consensus             GCATCTGATGCGATTTGATTTTTTGTTTTGCTTCGATATTGAATATTTGTAAATGATCTT
 
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JMFS073E06+           GAGTGGTTCCCGGAACTTGGGCTTTCAAAGCCAAAATTCTGGAATTGGGATTCATAAGAG
JMSF019L16+                                                       TTGGGATTCATAAGAG
                      ____________________________________________________________
consensus             GAGTGGTTCCCGGAACTTGGGCTTTCAAAGCCAAAATTCTGGAATTGGGATTCATAAGAG
 
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JMFS073E06+           CAGAATCAGCAGTAATAGGCCGTCTCAGAGGCTGCATTGGCATGTTCATATCAACGATCA
JMSF019L16+           CAGAATCAGCAGTAATAGGCCGTCTCAGAGGCTGCATTGGCATGTTCATATCAACGATCA
                      ____________________________________________________________
consensus             CAGAATCAGCAGTAATAGGCCGTCTCAGAGGCTGCATTGGCATGTTCATATCAACGATCA
 
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JMFS073E06+           CCACGCTATTCTGAGGCGCAGTCTCCCTCACGCAAATAAACTTATCAGATTCCATAGTGA
JMSF019L16+           CCACGCTATTCTGAGGCGCAGTCTCCCTCACGCAAATAAACTTATCAGATTCCATAGTGA
                      ____________________________________________________________
consensus             CCACGCTATTCTGAGGCGCAGTCTCCCTCACGCAAATAAACTTATCAGATTCCATAGTGA
 
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JMFS073E06+           CGTTTGTAAACGTGATGAACTGCGGATTAACTCCTATGCTCGACAACGTGAGAGTCTCCC
JMSF019L16+           CGTTTGTAAACGTGATGAACTGCGGATTAACTCCTATGCTCGACAACGTGAGAGTCTCCC
                      ____________________________________________________________
consensus             CGTTTGTAAACGTGATGAACTGCGGATTAACTCCTATGCTCGACAACGTGAGAGTCTCCC
 
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JMFS073E06+           GCATAGTGATCGGAGCGTTAGCGGCCGCCATGGCAGCAGCGGAATCGGAGCTCCGGACCT
JMSF019L16+           GCATAGTGATCGGAGCGTTAGCGGCCGCCATGGCAGCAGCGGAATCGGAGCTCCGGACCT
                      ____________________________________________________________
consensus             GCATAGTGATCGGAGCGTTAGCGGCCGCCATGGCAGCAGCGGAATCGGAGCTCCGGACCT
 
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JMFS073E06+           GCAAAGCAACAGCAAGT                                           
JMSF019L16+           GCAAAGCAACAGCAAGTGGAAAGCCGATAACCAACGCGAGGAGAATGTGAGTGATGAGAG
                      ____________________________________________________________
consensus             GCAAAGCAACAGCAAGTGGAAAGCCGATAACCAACGCGAGGAGAATGTGAGTGATGAGAG
 
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JMSF019L16+           CGGTTTAATGGAATCCGCGAGCGATCTCGGAGCACAGGCGAACCCTCCAAAAGCAGAAAA
                      ____________________________________________________________
consensus             CGGTTTAATGGAATCCGCGAGCGATCTCGGAGCACAGGCGAACCCTCCAAAAGCAGAAAA
 
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JMSF019L16+           AATTTTATTCTGTTTAGAGAGAGAGAAAGAGGAGGGAGATCTAAATCTAAAGAGTAAAGA
                      ____________________________________________________________
consensus             AATTTTATTCTGTTTAGAGAGAGAGAAAGAGGAGGGAGATCTAAATCTAAAGAGTAAAGA
 
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JMSF019L16+           GAGTTGGGAGGGTAAAATGCAATTCTAAGCTCTGGGCTTCTCTCTAATAGAGTACAACTC
                      ____________________________________________________________
consensus             GAGTTGGGAGGGTAAAATGCAATTCTAAGCTCTGGGCTTCTCTCTAATAGAGTACAACTC