Contig 003642:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018K01Sequence476003642 (2)ref|XP_011097668.1|2e-24PREDICTED: F-box protein At-B isoform X1 [Sesamum indicum]716009949 (2)ref|XP_009601889.1|8e-60PREDICTED: F-box protein At-B [Nicotiana tomentosiformis]
JMSF048E16Sequence716003642 (2)ref|XP_011097668.1|2e-41PREDICTED: F-box protein At-B isoform X1 [Sesamum indicum]813009949 (2)ref|XP_006346066.1|1e-60PREDICTED: F-box protein At-B-like isoform X1 [Solanum tuberosum] ref|XP_0063460

Alignment

This contig is upended


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JMSF048E16+               TTAAGTATGGAATGGATAAAATGCTGTTCATGCACTGGAAGTAACTTCAATGTTTT
                      ____________________________________________________________
consensus                 TTAAGTATGGAATGGATAAAATGCTGTTCATGCACTGGAAGTAACTTCAATGTTTT
 
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JMSF048E16+           GAGAGTTGTGGGTAGAGAATGGTAAAGATGTTGAAAATCATATACATCAACTGCAGTCCC
                      ____________________________________________________________
consensus             GAGAGTTGTGGGTAGAGAATGGTAAAGATGTTGAAAATCATATACATCAACTGCAGTCCC
 
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JMSF048E16+           ATGAATTTTTAAAGATAGAGACTCCAGATAGGAAATGTTTTTAAGCATTACTACTAGGCT
                      ____________________________________________________________
consensus             ATGAATTTTTAAAGATAGAGACTCCAGATAGGAAATGTTTTTAAGCATTACTACTAGGCT
 
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JMSF048E16+           CTTGATAAGTTGTGGTATTCTCTGCCATGCAATTTCAATTAAAAGGACCCTTAAGTTTGG
                      ____________________________________________________________
consensus             CTTGATAAGTTGTGGTATTCTCTGCCATGCAATTTCAATTAAAAGGACCCTTAAGTTTGG
 
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JMSF048E16+           GCACCTATGCCCAATTGTACCAAGAATATGATGTGATCGTGAGGAACACTTGATCAAATT
JMSF018K01+               CTATGCCCAATTGTACCAAGAATATGATGTGATCGTGAGGAACACTTGATCAAATT
                      ____________________________________________________________
consensus             GCACCTATGCCCAATTGTACCAAGAATATGATGTGATCGTGAGGAACACTTGATCAAATT
 
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JMSF048E16+           TAGTTCCTGGATTTGTGCTCCCAGGATGTTGATAAAAGAAAAATCATCCACACGAAGGCA
JMSF018K01+           TAGTTCCTGGATTTGTGCTCCCAGGATGTTGATAAAAGAAAAATCATCCACACGAAGGCA
                      ____________________________________________________________
consensus             TAGTTCCTGGATTTGTGCTCCCAGGATGTTGATAAAAGAAAAATCATCCACACGAAGGCA
 
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JMSF048E16+           ATCAATGGTTAAGCTCTTGACCCCCTTGAGCCTACCTACAATACTTTGCAAAGTCTGGGA
JMSF018K01+           ATCAATGGTTAAGCTCTTGACCCCCTTGAGCCTACCTACAATACTTTGCAAAGTCTGGGA
                      ____________________________________________________________
consensus             ATCAATGGTTAAGCTCTTGACCCCCTTGAGCCTACCTACAATACTTTGCAAAGTCTGGGA
 
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JMSF048E16+           GTCTGGATAAAATGCAGAGATATCGAGAGAGGAACGAGAAGCAAGAACTTGAGATGCAGC
JMSF018K01+           GTCTGGATAAAATGCAGAGATATCGAGAGAGGAACGAGAAGCAAGAACTTGAGATGCAGC
                      ____________________________________________________________
consensus             GTCTGGATAAAATGCAGAGATATCGAGAGAGGAACGAGAAGCAAGAACTTGAGATGCAGC
 
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JMSF048E16+           GGAGCGGAGGGTCCGGGACACACAAGCTGCGGTGCAGAGAGATTCCAAGTCCAGCTTTAG
JMSF018K01+           GGAGCGGAGGGTCCGGGACACACAAGCTGCGGTGCAGAGAGATTCCAAGTCCAGCTTTAG
                      ____________________________________________________________
consensus             GGAGCGGAGGGTCCGGGACACACAAGCTGCGGTGCAGAGAGATTCCAAGTCCAGCTTTAG
 
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JMSF048E16+           CAGAAGTTCGTTGATAATACTGTCCGGCAGCCTCTCCAACGACCAATGCGACCTTCCCCT
JMSF018K01+           CAGAAGTTCGTTGATAATACTGTCCGGCAGCCTCTCCAACGACCAATGCGACCTTCCCCT
                      ____________________________________________________________
consensus             CAGAAGTTCGTTGATAATACTGTCCGGCAGCCTCTCCAACGACCAATGCGACCTTCCCCT
 
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JMSF048E16+           ACTCCCTTCCTCGCCGGGGAACTTATTTCCGGTCGCATCCATGAAATGAAATCAACCCCT
JMSF018K01+           ACTCCCTTCCTCGCCGGGGAACTTATTTCCGGTCGCATCCATGAAATGAAATCAACCCCT
                      ____________________________________________________________
consensus             ACTCCCTTCCTCGCCGGGGAACTTATTTCCGGTCGCATCCATGAAATGAAATCAACCCCT
 
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JMSF048E16+           TTTCTCCTACAACTACAATCTATCTATTTGCTGCACAAAATGCCGCTTCCACGACTCTTC
JMSF018K01+           TTTCTCCTACAACTACAATCTATCTATTTGCTGCACAAAATGCCGCTTCCACGACTCTTC
                      ____________________________________________________________
consensus             TTTCTCCTACAACTACAATCTATCTATTTGCTGCACAAAATGCCGCTTCCACGACTCTTC