| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003F11 | Sequence | 534 | 003636 (5) | gb|EYU37978.1| | 9e-65 | hypothetical protein MIMGU_mgv1a002825mg [Erythranthe guttata] | 738 | 003988 (2) | gb|AFW76484.1| | 3e-89 | putative ATPase, V1 complex, subunit B protein [Zea mays] gb|AFW86991.1| putativ |
| JMFF016A18 | Sequence | 555 | 003636 (5) | gb|EYU37978.1| | 4e-72 | hypothetical protein MIMGU_mgv1a002825mg [Erythranthe guttata] | 659 | 003988 (2) | ref|XP_008377719.1| | 1e-69 | PREDICTED: V-type proton ATPase subunit B 2-like [Malus domestica] |
| JMFF030I20 | Sequence | 388 | 003636 (5) | gb|EYU37978.1| | 2e-50 | hypothetical protein MIMGU_mgv1a002825mg [Erythranthe guttata] | |||||
| JMSF004L13 | Sequence | 422 | 003636 (5) | gb|EYU37978.1| | 3e-50 | hypothetical protein MIMGU_mgv1a002825mg [Erythranthe guttata] | |||||
| JMSF017L10 | Sequence | 582 | 003636 (5) | gb|EYU37978.1| | 1e-88 | hypothetical protein MIMGU_mgv1a002825mg [Erythranthe guttata] | 792 | 024527 | gb|AFW76484.1| | 4e-100 | putative ATPase, V1 complex, subunit B protein [Zea mays] gb|AFW86991.1| putativ |
This contig is upended
. : . : . : . : . : . :
JMFF016A18+ TTGAATCATTTCTTCAGGATAGGTTCTCTCACTGGGATTGATAGAACTTCCAGA
JMSF017L10+ CTTCAGGATAGGTTCTCTCACTGGGATTGATAGAACTTCCAGA
____________________________________________________________
consensus TTGAATCATTTCTTCAGGATAGGTTCTCTCACTGGGATTGATAGAACTTCCAGA
. : . : . : . : . : . :
JMFF016A18+ AATGTCCAAGTAAGCCTCGGGAAGAATAGGAGGACCATTGTCAATTGGTTTCCCAGAACC
JMFF003F11+ TCCAAGTAAGCCTCGGGAAGAATAGGAGGACCATTGTCAATTGG-TTCCCAGAACC
JMSF017L10+ AATGTCCAAGTAAGCNTCGGGAAGAATAGGAGGACCATTGTCAATTGGTTTCCCAGAACC
____________________________________________________________
consensus AATGTCCAAGTAAGCCTCGGGAAGAATAGGAGGACCATTGTCAATTGGTTTCCCAGAACC
. : . : . : . : . : . :
JMFF016A18+ ATTAAAAATGCGACCAAGCATATCCAAGGAGACTGGAGTTTTTAAAACCTCCCCAGTTAA
JMFF003F11+ ATTAAAAATGCGACCAAGCATATCCAAGGAGACTGGAGTTTTTAAAACCTCCCCAG-TAA
JMSF004L13+ AG-TAA
JMFF030I20+ AG-TAA
JMSF017L10+ ATTAAAAATGCGACCAAGCATATCCAAGGAGACTGGAGTTTTTAAAACCTCCCCAG-TAA
____________________________________________________________
consensus ATTAAAAATGCGACCAAGCATATCCAAGGAGACTGGAGTTTTTAAAACCTCCCCAG-TAA
. : . : . : . : . : . :
JMFF016A18+ ATTGCACCGTTGTATATTTGTTGTCAATTCCAGAAGTTCCCTCAAAAACCTGAACAACAG
JMFF003F11+ ATTGCACCGTTGTATATTTGTTGTCAATTCCAGAAGTTCCCTCAAAAACCTGAACAACAG
JMSF004L13+ ATTGCACCGTNGTATATTTGTTGTCAATTCCAGAAGTTCCCTCAAAAACCTGAACAACAG
JMFF030I20+ ATTGCACCGTTGTATATTTGTTGTCAATTCCAGAAGTTCCCTCAAAAACCTGAACAACAG
JMSF017L10+ ATTGCACCGTTGTATATTTGTTGTCAATTCCAGAAGTTCCCTCAAAAACCTGAACAACAG
____________________________________________________________
consensus ATTGCACCGTTGTATATTTGTTGTCAATTCCAGAAGTTCCCTCAAAAACCTGAACAACAG
. : . : . : . : . : . :
JMFF016A18+ CTTTCTCCCCATCGACTTCCAGAACTTGTCCACGTCGGGTAGTTCCATCACCTAAACGAA
JMFF003F11+ CTTTCTCCCCATCGACTTCCAGAACTTGTCCACGTCGGGTAGTTCCATCACCTAAACGAA
JMSF004L13+ CTTTCTCCCCATCGACTTCCAGAACTTGTCCACGTCGGGTAGTTCCATCACCTAAACGAA
JMFF030I20+ CTTTCTCCCCATCGACTTCCAGAACTTGTCCACGTCGGGTAGTTCCATCACCTAAACGAA
JMSF017L10+ CTTTCTCCCCATCGACTTCCAGAACTTGTCCACGTCGGGTAGTTCCATCACCTAAACGAA
____________________________________________________________
consensus CTTTCTCCCCATCGACTTCCAGAACTTGTCCACGTCGGGTAGTTCCATCACCTAAACGAA
. : . : . : . : . : . :
JMFF016A18+ TATTAACAATCTCCTGGTACTTGGGTCCCTTGACTTTGTCAAGGATCACCAAAGGCCCTG
JMFF003F11+ TATTAACAATCTCCTGGTACTTGGGTCCCTTGACTTTGTCAAGGATCACCAAAGGCCCTG
JMSF004L13+ TATTAACAATCTCCTGGTACTTGGGTCCCTTGACTTTGTCAAGGATCACCAAAGGCCCTG
JMFF030I20+ TATTAACAATCTCCTGGTACTTGGGTCCCTTGACTTTGTCAAGGATCACCAAAGGCCCTG
JMSF017L10+ TATTAACAATCTCCTGGTACTTGGGTCCCTTGACTTTGTCAAGGATCACCAAAGGCCCTG
____________________________________________________________
consensus TATTAACAATCTCCTGGTACTTGGGTCCCTTGACTTTGTCAAGGATCACCAAAGGCCCTG
. : . : . : . : . : . :
JMFF016A18+ CAACTCCAGAAACAGTTCTATATTCCATGCCAATCTCCAGAGTTCCCTCCTCCATGTCAA
JMFF003F11+ CAACTCCAGAAACAGTTCTATATTCCATGCCAATCTCCAGAGTTCCCTCCTCCATGTCAA
JMSF004L13+ CAACTCCAGAAACAGTTCTATATTCCATGCCAATCTCCAGAGTTCCCTCCTCCATGTCAA
JMFF030I20+ CAACTCCAGAAACAGTTCTATATTCCATGCCAATCTCCAGAGTTCCCTCCTCCATGTCAA
JMSF017L10+ CAACTCCAGAAACAGTTCTATATTCCATGCCAATCTCCAGAGTTCCCTCCTCCATGTCAA
____________________________________________________________
consensus CAACTCCAGAAACAGTTCTATATTCCATGCCAATCTCCAGAGTTCCCTCCTCCATGTCAA
. : . : . : . : . : . :
JMFF016A18+ TACCATTTTGAGCCGGCATGTTTTGAACTCTCTGGTTCGTTATCCTGAAATCCGGCAGAA
JMFF003F11+ TACCATTTTGAGCCGGCATGTTTTGAACTCTCTGGTTCGTTATCCTGAAATCCGGCAGAA
JMSF004L13+ TACCATTTTGAGCCGGCATGTTTTGAACTCTCTGGTTCGTTATCCTGAAATCCGGCAGAA
JMFF030I20+ TACCATTTTGAGCCGGCATGTTTTGAACTCTCTGGTTCGTTATCCTGAAATCCGGCAGAA
JMSF017L10+ TACCATTTTGAGCCGGCATGTTTTGAACTCTCTGGTTCGTTATCCTGAAATCCGGCAGAA
____________________________________________________________
consensus TACCATTTTGAGCCGGCATGTTTTGAACTCTCTGGTTCGTTATCCTGAAATCCGGCAGAA
. : . : . : . : . : . :
JMFF016A18+ GAAGACAATAGCAGAGTCGCTGAGACAACGGTGGAGCGTGGAGAAACGAAGCTGAGATCT
JMFF003F11+ GAAGACAATAGCAGAGTCGCTGAGACAACGGTGGAGCGTGGAGAAACGAAGCTGAGATCT
JMSF004L13+ GAAGACAATAGCAGAGTCGCTGAGACAACGGTGGAGCGTGGAGAAACGAAGCTGAGATCT
JMFF030I20+ GAAGACAATAGCAGAGTCGCTGAGACAACGGTGGAGCGTGGAGAAACGAAGCTGAGATCT
JMSF017L10+ GAAGACAATAGCAGAGTCGCTGAGACAACGGTGGAGCGTGGAGAAACGAAGCTGAGATCT
____________________________________________________________
consensus GAAGACAATAGCAGAGTCGCTGAGACAACGGTGGAGCGTGGAGAAACGAAGCTGAGATCT
. : . : . : . : . : . :
JMFF016A18+ AATGGGACAGGGAAGGAAGGT
JMFF003F11+ AATGGGACAGGGAAGGAAGGTGTTCGGCAAGTAAATTTCCTTTGTATCTATAAGAC
JMSF004L13+ AATGGGACAGGGAAGGAAGGTGTTCGGCAAGTAAATTTCCTTTGTATCTATAAGAC
JMFF030I20+ AATGGGACAGGGAAGGAAGGT
JMSF017L10+ AATGGGACAGGGAAGGAAGGTGTTCGGCAAGTAAATTTCCTTTGTATCTATAAGACGCCC
____________________________________________________________
consensus AATGGGACAGGGAAGGAAGGTGTTCGGCAAGTAAATTTCCTTTGTATCTATAAGACGCCC